RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
TRIO-202ENST00000344204 TEX35Q5T0J7 233 aa17.1■□□□□ 0.33
TRIO-202ENST00000344204 ZMYND15Q9H091 742 aa17.1■□□□□ 0.33
TRIO-202ENST00000344204 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
TRIO-202ENST00000344204 MCCP23508 829 aa17.1■□□□□ 0.33
TRIO-202ENST00000344204 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
TRIO-202ENST00000344204 RSF1Q96T23 1441 aaPredicted RBP17.09■□□□□ 0.33
TRIO-202ENST00000344204 NOM1Q5C9Z4 860 aaKnown RBP17.08■□□□□ 0.33
TRIO-202ENST00000344204 SLC4A3P48751 1232 aa17.08■□□□□ 0.32
TRIO-202ENST00000344204 VPS8Q8N3P4 1428 aa17.06■□□□□ 0.32
TRIO-202ENST00000344204 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
TRIO-202ENST00000344204 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
TRIO-202ENST00000344204 GPS2Q13227 327 aa17.05■□□□□ 0.32
TRIO-202ENST00000344204 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
TRIO-202ENST00000344204 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
TRIO-202ENST00000344204 KTN1Q86UP2 1357 aaKnown RBP17.05■□□□□ 0.32
TRIO-202ENST00000344204 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
TRIO-202ENST00000344204 MRE11P49959 708 aa17.04■□□□□ 0.32
TRIO-202ENST00000344204 ABCC9O60706 1549 aa17.04■□□□□ 0.32
TRIO-202ENST00000344204 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
TRIO-202ENST00000344204 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
TRIO-202ENST00000344204 PAK3O75914 559 aaPredicted RBP17.03■□□□□ 0.32
TRIO-202ENST00000344204 CDCA8Q53HL2 280 aa17.03■□□□□ 0.32
TRIO-202ENST00000344204 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
TRIO-202ENST00000344204 NASPP49321 788 aaPredicted RBP17.01■□□□□ 0.31
TRIO-202ENST00000344204 PDE3BQ13370 1112 aa17■□□□□ 0.31
TRIO-202ENST00000344204 HSPA5P11021 654 aaKnown RBP17■□□□□ 0.31
TRIO-202ENST00000344204 R3HCC1Q9Y3T6 440 aaKnown RBP16.99■□□□□ 0.31
TRIO-202ENST00000344204 CWC15Q9P013 229 aaKnown RBP16.99■□□□□ 0.31
TRIO-202ENST00000344204 MSH5O43196 834 aa16.98■□□□□ 0.31
TRIO-202ENST00000344204 PMFBP1Q8TBY8 1022 aa16.98■□□□□ 0.31
TRIO-202ENST00000344204 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
TRIO-202ENST00000344204 RALBP1Q15311 655 aa16.98■□□□□ 0.31
TRIO-202ENST00000344204 RAB3GAP2Q9H2M9 1393 aa16.97■□□□□ 0.31
TRIO-202ENST00000344204 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
TRIO-202ENST00000344204 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
TRIO-202ENST00000344204 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
TRIO-202ENST00000344204 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
TRIO-202ENST00000344204 PHLDB1Q86UU1 1377 aa16.96■□□□□ 0.31
TRIO-202ENST00000344204 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
TRIO-202ENST00000344204 HMGN5P82970 282 aaKnown RBP16.94■□□□□ 0.3
TRIO-202ENST00000344204 RBM10P98175 930 aaKnown RBP16.94■□□□□ 0.3
TRIO-202ENST00000344204 FGD1P98174 961 aa16.94■□□□□ 0.3
TRIO-202ENST00000344204 KCNJ4P48050 445 aa16.93■□□□□ 0.3
TRIO-202ENST00000344204 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
TRIO-202ENST00000344204 TPM4P67936 248 aa16.91■□□□□ 0.3
TRIO-202ENST00000344204 NOC3LQ8WTT2 800 aaKnown RBP16.91■□□□□ 0.3
TRIO-202ENST00000344204 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
TRIO-202ENST00000344204 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
TRIO-202ENST00000344204 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
TRIO-202ENST00000344204 CCDC173Q0VFZ6 552 aa16.9■□□□□ 0.3
TRIO-202ENST00000344204 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
TRIO-202ENST00000344204 CHMP5Q9NZZ3 219 aa16.9■□□□□ 0.3
TRIO-202ENST00000344204 FRAT2O75474 233 aaPredicted RBP16.9■□□□□ 0.3
TRIO-202ENST00000344204 ST18O60284 1047 aa16.89■□□□□ 0.29
TRIO-202ENST00000344204 UQCRHLA0A096LP55 91 aa16.88■□□□□ 0.29
TRIO-202ENST00000344204 UQCRHP07919 91 aa16.88■□□□□ 0.29
TRIO-202ENST00000344204 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
TRIO-202ENST00000344204 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
TRIO-202ENST00000344204 EXOC6Q8TAG9 804 aa16.87■□□□□ 0.29
TRIO-202ENST00000344204 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
TRIO-202ENST00000344204 DHX57Q6P158 1386 aaKnown RBP16.87■□□□□ 0.29
TRIO-202ENST00000344204 ESPNB1AK53 854 aa16.86■□□□□ 0.29
TRIO-202ENST00000344204 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
TRIO-202ENST00000344204 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
TRIO-202ENST00000344204 ZNF592Q92610 1267 aa16.85■□□□□ 0.29
TRIO-202ENST00000344204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.297e-7■■□□□ 14.1
TRIO-202ENST00000344204 ARGLU1Q9NWB6 273 aaPredicted RBP16.84■□□□□ 0.29
TRIO-202ENST00000344204 ITPRIPQ8IWB1 547 aa16.83■□□□□ 0.28
TRIO-202ENST00000344204 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
TRIO-202ENST00000344204 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
TRIO-202ENST00000344204 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
TRIO-202ENST00000344204 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
TRIO-202ENST00000344204 CRBNQ96SW2 442 aa16.81■□□□□ 0.28
TRIO-202ENST00000344204 TSPYL1Q9H0U9 437 aa16.81■□□□□ 0.28
TRIO-202ENST00000344204 TRAK2O60296 914 aa16.81■□□□□ 0.28
TRIO-202ENST00000344204 BBXQ8WY36 941 aaPredicted RBP16.8■□□□□ 0.28
TRIO-202ENST00000344204 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
TRIO-202ENST00000344204 NAP1L2Q9ULW6 460 aaPredicted RBP16.8■□□□□ 0.28
TRIO-202ENST00000344204 PPP1R15AO75807 674 aaPredicted RBP16.79■□□□□ 0.28
TRIO-202ENST00000344204 CCAR2Q8N163 923 aaKnown RBP16.79■□□□□ 0.28
TRIO-202ENST00000344204 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
TRIO-202ENST00000344204 ZHX1Q9UKY1 873 aaPredicted RBP16.78■□□□□ 0.28
TRIO-202ENST00000344204 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
TRIO-202ENST00000344204 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
TRIO-202ENST00000344204 CENPJQ9HC77 1338 aaPredicted RBP16.78■□□□□ 0.28
TRIO-202ENST00000344204 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.27
TRIO-202ENST00000344204 NLRP13Q86W25 1043 aa16.77■□□□□ 0.27
TRIO-202ENST00000344204 GNL2Q13823 731 aaKnown RBP16.77■□□□□ 0.27
TRIO-202ENST00000344204 TAF7LQ5H9L4 462 aa16.76■□□□□ 0.27
TRIO-202ENST00000344204 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
TRIO-202ENST00000344204 ATP6V1DQ9Y5K8 247 aa16.76■□□□□ 0.27
TRIO-202ENST00000344204 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
TRIO-202ENST00000344204 OS9Q13438 667 aaPredicted RBP16.76■□□□□ 0.27
TRIO-202ENST00000344204 IFT57Q9NWB7 429 aa16.75■□□□□ 0.27
TRIO-202ENST00000344204 TPM3P06753 285 aa16.75■□□□□ 0.27
TRIO-202ENST00000344204 GOLGA6L19H0YKK7 550 aa16.75■□□□□ 0.27
TRIO-202ENST00000344204 PDIA4P13667 645 aaKnown RBP16.75■□□□□ 0.27
TRIO-202ENST00000344204 TMF1P82094 1093 aa16.75■□□□□ 0.27
TRIO-202ENST00000344204 KIF27Q86VH2 1401 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms