RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ARHGAP5Q13017 1502 aa32.26■■■□□ 2.76
SYNE2-201ENST00000341472 LRRIQ1Q96JM4 1722 aa32.24■■■□□ 2.75
SYNE2-201ENST00000341472 YEATS2Q9ULM3 1422 aa32.23■■■□□ 2.75
SYNE2-201ENST00000341472 RICTORQ6R327 1708 aa32.23■■■□□ 2.75
SYNE2-201ENST00000341472 MYT1LQ9UL68 1186 aa32.22■■■□□ 2.75
SYNE2-201ENST00000341472 ZMYM4Q5VZL5 1548 aa32.2■■■□□ 2.74
SYNE2-201ENST00000341472 MYO5CQ9NQX4 1742 aa32.19■■■□□ 2.74
SYNE2-201ENST00000341472 ZFYVE16Q7Z3T8 1539 aa32.18■■■□□ 2.74
SYNE2-201ENST00000341472 ARHGEF40Q8TER5 1519 aa32.17■■■□□ 2.74
SYNE2-201ENST00000341472 ZNF777Q9ULD5 760 aaPredicted RBP32.17■■■□□ 2.74
SYNE2-201ENST00000341472 MTUS2Q5JR59 1369 aa32.16■■■□□ 2.74
SYNE2-201ENST00000341472 MLECQ14165 292 aa32.14■■■□□ 2.74
SYNE2-201ENST00000341472 ZNF518AQ6AHZ1 1483 aa32.13■■■□□ 2.73
SYNE2-201ENST00000341472 ATP10AO60312 1499 aa32.12■■■□□ 2.73
SYNE2-201ENST00000341472 PTPRMP28827 1452 aa32.11■■■□□ 2.73
SYNE2-201ENST00000341472 CFDP1Q9UEE9 299 aaPredicted RBP32.11■■■□□ 2.73
SYNE2-201ENST00000341472 ADAMTSL3P82987 1691 aa32.08■■■□□ 2.73
SYNE2-201ENST00000341472 CCNB3Q8WWL7 1395 aa32.08■■■□□ 2.73
SYNE2-201ENST00000341472 GPATCH8Q9UKJ3 1502 aaKnown RBP32.08■■■□□ 2.73
SYNE2-201ENST00000341472 TRAPPC8Q9Y2L5 1435 aa32.06■■■□□ 2.72
SYNE2-201ENST00000341472 HNRNPMP52272 730 aaKnown RBP eCLIP32.04■■■□□ 2.72
SYNE2-201ENST00000341472 ARHGEF12Q9NZN5 1544 aa32.04■■■□□ 2.72
SYNE2-201ENST00000341472 BCORL1Q5H9F3 1711 aa32.03■■■□□ 2.72
SYNE2-201ENST00000341472 C9orf84Q5VXU9 1444 aa32.03■■■□□ 2.72
SYNE2-201ENST00000341472 CDC42BPBQ9Y5S2 1711 aa32.02■■■□□ 2.72
SYNE2-201ENST00000341472 PREX2Q70Z35 1606 aa32.01■■■□□ 2.72
SYNE2-201ENST00000341472 MLH3Q9UHC1 1453 aa32■■■□□ 2.71
SYNE2-201ENST00000341472 PLPPR3Q6T4P5 718 aa32■■■□□ 2.71
SYNE2-201ENST00000341472 KDM5CP41229 1560 aa31.98■■■□□ 2.71
SYNE2-201ENST00000341472 ABCC1P33527 1531 aa31.97■■■□□ 2.71
SYNE2-201ENST00000341472 HECW2Q9P2P5 1572 aa31.96■■■□□ 2.71
SYNE2-201ENST00000341472 MADDQ8WXG6 1647 aa31.96■■■□□ 2.71
SYNE2-201ENST00000341472 SPAG9O60271 1321 aaKnown RBP31.95■■■□□ 2.7
SYNE2-201ENST00000341472 KIAA1107Q9UPP5 1409 aa31.93■■■□□ 2.7
SYNE2-201ENST00000341472 VPS8Q8N3P4 1428 aa31.92■■■□□ 2.7
SYNE2-201ENST00000341472 ZNF644Q9H582 1327 aaPredicted RBP31.91■■■□□ 2.7
SYNE2-201ENST00000341472 CDC42BPAQ5VT25 1732 aa31.91■■■□□ 2.7
SYNE2-201ENST00000341472 PLEKHH2Q8IVE3 1493 aa31.91■■■□□ 2.7
SYNE2-201ENST00000341472 EHBP1L1Q8N3D4 1523 aa31.89■■■□□ 2.7
SYNE2-201ENST00000341472 SIGLEC1Q9BZZ2 1709 aa31.86■■■□□ 2.69
SYNE2-201ENST00000341472 SAMD9LQ8IVG5 1584 aa31.85■■■□□ 2.69
SYNE2-201ENST00000341472 DIP2CQ9Y2E4 1556 aa31.83■■■□□ 2.69
SYNE2-201ENST00000341472 ESF1Q9H501 851 aaKnown RBP31.83■■■□□ 2.69
SYNE2-201ENST00000341472 SYCP2Q9BX26 1530 aa31.83■■■□□ 2.69
SYNE2-201ENST00000341472 CEBPAP49715 358 aaPredicted RBP31.82■■■□□ 2.68
SYNE2-201ENST00000341472 RIMS1Q86UR5 1692 aaKnown RBP31.82■■■□□ 2.68
SYNE2-201ENST00000341472 ITSN2Q9NZM3 1697 aa31.82■■■□□ 2.68
SYNE2-201ENST00000341472 NCOA2Q15596 1464 aa31.79■■■□□ 2.68
SYNE2-201ENST00000341472 REREQ9P2R6 1566 aa31.77■■■□□ 2.68
SYNE2-201ENST00000341472 KANK4Q5T7N3 995 aaPredicted RBP31.77■■■□□ 2.68
SYNE2-201ENST00000341472 TIAM1Q13009 1591 aa31.77■■■□□ 2.68
SYNE2-201ENST00000341472 AGLP35573 1532 aa31.75■■■□□ 2.67
SYNE2-201ENST00000341472 ABCA6Q8N139 1617 aa31.75■■■□□ 2.67
SYNE2-201ENST00000341472 RSPH4AQ5TD94 716 aa31.75■■■□□ 2.67
SYNE2-201ENST00000341472 APLP2Q06481 763 aa31.74■■■□□ 2.67
SYNE2-201ENST00000341472 LRRC9Q6ZRR7 1453 aa31.73■■■□□ 2.67
SYNE2-201ENST00000341472 MBD5Q9P267 1494 aa31.72■■■□□ 2.67
SYNE2-201ENST00000341472 HSPA2P54652 639 aa31.72■■■□□ 2.67
SYNE2-201ENST00000341472 KIDINS220Q9ULH0 1771 aa31.71■■■□□ 2.67
SYNE2-201ENST00000341472 LMTK3Q96Q04 1460 aa31.71■■■□□ 2.67
SYNE2-201ENST00000341472 MAP3K1Q13233 1512 aa31.67■■■□□ 2.66
SYNE2-201ENST00000341472 ATP7AQ04656 1500 aa31.65■■■□□ 2.66
SYNE2-201ENST00000341472 SUPT6HQ7KZ85 1726 aaKnown RBP31.65■■■□□ 2.66
SYNE2-201ENST00000341472 FER1L4A9Z1Z3 1794 aa31.65■■■□□ 2.66
SYNE2-201ENST00000341472 A2MP01023 1474 aa31.65■■■□□ 2.66
SYNE2-201ENST00000341472 TSPY4P0CV99 314 aa31.64■■■□□ 2.66
SYNE2-201ENST00000341472 TSPY10P0CW01 314 aa31.64■■■□□ 2.66
SYNE2-201ENST00000341472 GGT6Q6P531 493 aa31.63■■■□□ 2.65
SYNE2-201ENST00000341472 RTEL1-TNFRSF6BF6WH68 1400 aa31.63■■■□□ 2.65
SYNE2-201ENST00000341472 CNTLNQ9NXG0 1405 aa31.6■■■□□ 2.65
SYNE2-201ENST00000341472 CAMSAP2Q08AD1 1489 aa31.59■■■□□ 2.65
SYNE2-201ENST00000341472 PPP6R1Q9UPN7 881 aa31.58■■■□□ 2.65
SYNE2-201ENST00000341472 DHX29Q7Z478 1369 aaKnown RBP31.56■■■□□ 2.64
SYNE2-201ENST00000341472 CCDC141Q6ZP82 1450 aa31.56■■■□□ 2.64
SYNE2-201ENST00000341472 INO80Q9ULG1 1556 aaPredicted RBP31.56■■■□□ 2.64
SYNE2-201ENST00000341472 ZMYM3Q14202 1370 aa31.55■■■□□ 2.64
SYNE2-201ENST00000341472 ILDR1Q86SU0 546 aaPredicted RBP31.54■■■□□ 2.64
SYNE2-201ENST00000341472 KIF3BO15066 747 aa31.51■■■□□ 2.63
SYNE2-201ENST00000341472 MIA2Q96PC5 1412 aa31.5■■■□□ 2.63
SYNE2-201ENST00000341472 MYOM3Q5VTT5 1437 aa31.49■■■□□ 2.63
SYNE2-201ENST00000341472 UHRF1BP1Q6BDS2 1440 aa31.49■■■□□ 2.63
SYNE2-201ENST00000341472 PLXNC1O60486 1568 aa31.47■■■□□ 2.63
SYNE2-201ENST00000341472 SETD1BQ9UPS6 1966 aaKnown RBP31.41■■■□□ 2.62
SYNE2-201ENST00000341472 DMRT2Q9Y5R5 561 aa31.41■■■□□ 2.62
SYNE2-201ENST00000341472 ARHGEF5Q12774 1597 aa31.41■■■□□ 2.62
SYNE2-201ENST00000341472 NPATQ14207 1427 aa31.39■■■□□ 2.62
SYNE2-201ENST00000341472 C3P01024 1663 aa31.38■■■□□ 2.61
SYNE2-201ENST00000341472 ADGBQ8N7X0 1667 aa31.38■■■□□ 2.61
SYNE2-201ENST00000341472 WASHC2CQ9Y4E1 1318 aa31.36■■■□□ 2.61
SYNE2-201ENST00000341472 PREX1Q8TCU6 1659 aa31.35■■■□□ 2.61
SYNE2-201ENST00000341472 PTPRKQ15262 1439 aa31.31■■■□□ 2.6
SYNE2-201ENST00000341472 FBXO41Q8TF61 875 aa31.28■■■□□ 2.6
SYNE2-201ENST00000341472 MROH2AA6NES4 1674 aa31.27■■■□□ 2.6
SYNE2-201ENST00000341472 ABCC5O15440 1437 aa31.26■■■□□ 2.6
SYNE2-201ENST00000341472 FBXO31Q5XUX0 539 aaPredicted RBP31.26■■■□□ 2.59
SYNE2-201ENST00000341472 FGD6Q6ZV73 1430 aa31.25■■■□□ 2.59
SYNE2-201ENST00000341472 RRP7BPQ9NSQ0 103 aa31.25■■■□□ 2.59
SYNE2-201ENST00000341472 CLTCQ00610 1675 aaKnown RBP31.25■■■□□ 2.59
SYNE2-201ENST00000341472 MAST1Q9Y2H9 1570 aa31.23■■■□□ 2.59
SYNE2-201ENST00000341472 CERKQ8TCT0 537 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms