RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 PLEKHD1A6NEE1 506 aa22.82■■□□□ 1.24
CCDC144A-202ENST00000340621 GPATCH8Q9UKJ3 1502 aaKnown RBP22.82■■□□□ 1.24
CCDC144A-202ENST00000340621 ATP10BO94823 1461 aa22.82■■□□□ 1.24
CCDC144A-202ENST00000340621 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
CCDC144A-202ENST00000340621 PTPRGP23470 1445 aa22.8■■□□□ 1.24
CCDC144A-202ENST00000340621 MPHOSPH9Q99550 1183 aa22.8■■□□□ 1.24
CCDC144A-202ENST00000340621 KIF14Q15058 1648 aa22.79■■□□□ 1.24
CCDC144A-202ENST00000340621 ZNF777Q9ULD5 760 aaPredicted RBP22.79■■□□□ 1.24
CCDC144A-202ENST00000340621 DNMT1P26358 1616 aaKnown RBP22.79■■□□□ 1.24
CCDC144A-202ENST00000340621 CAMSAP2Q08AD1 1489 aa22.76■■□□□ 1.23
CCDC144A-202ENST00000340621 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
CCDC144A-202ENST00000340621 HIRIP3Q9BW71 556 aaPredicted RBP22.73■■□□□ 1.23
CCDC144A-202ENST00000340621 FOXD1Q16676 465 aa22.72■■□□□ 1.23
CCDC144A-202ENST00000340621 CHD1O14646 1710 aa22.71■■□□□ 1.23
CCDC144A-202ENST00000340621 ABCC10Q5T3U5 1492 aa22.69■■□□□ 1.22
CCDC144A-202ENST00000340621 ITSN2Q9NZM3 1697 aa22.69■■□□□ 1.22
CCDC144A-202ENST00000340621 GTF3C3Q9Y5Q9 886 aa22.69■■□□□ 1.22
CCDC144A-202ENST00000340621 NCOA1Q15788 1441 aa22.68■■□□□ 1.22
CCDC144A-202ENST00000340621 DDX10Q13206 875 aaKnown RBP22.67■■□□□ 1.22
CCDC144A-202ENST00000340621 KDM5BQ9UGL1 1544 aa22.67■■□□□ 1.22
CCDC144A-202ENST00000340621 SLC4A1APQ9BWU0 796 aaKnown RBP22.63■■□□□ 1.21
CCDC144A-202ENST00000340621 SHROOM2Q13796 1616 aa22.62■■□□□ 1.21
CCDC144A-202ENST00000340621 ANKRD30BQ9BXX2 1392 aa22.61■■□□□ 1.21
CCDC144A-202ENST00000340621 ADGRL2O95490 1459 aa22.6■■□□□ 1.21
CCDC144A-202ENST00000340621 ANKRD30AQ9BXX3 1397 aa22.59■■□□□ 1.21
CCDC144A-202ENST00000340621 L3MBTL2Q969R5 705 aa22.59■■□□□ 1.21
CCDC144A-202ENST00000340621 CDC42BPAQ5VT25 1732 aa22.59■■□□□ 1.21
CCDC144A-202ENST00000340621 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.21
CCDC144A-202ENST00000340621 HNRNPMP52272 730 aaKnown RBP eCLIP22.57■■□□□ 1.2
CCDC144A-202ENST00000340621 TSPY4P0CV99 314 aa22.54■■□□□ 1.2
CCDC144A-202ENST00000340621 TSPY10P0CW01 314 aa22.54■■□□□ 1.2
CCDC144A-202ENST00000340621 PZPP20742 1482 aa22.54■■□□□ 1.2
CCDC144A-202ENST00000340621 CROCC2H7BZ55 1655 aa22.53■■□□□ 1.2
CCDC144A-202ENST00000340621 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
CCDC144A-202ENST00000340621 C9orf84Q5VXU9 1444 aa22.52■■□□□ 1.2
CCDC144A-202ENST00000340621 KCNH8Q96L42 1107 aa22.52■■□□□ 1.2
CCDC144A-202ENST00000340621 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
CCDC144A-202ENST00000340621 RPRD2Q5VT52 1461 aaKnown RBP22.51■■□□□ 1.19
CCDC144A-202ENST00000340621 SHANK2Q9UPX8 1470 aa22.5■■□□□ 1.19
CCDC144A-202ENST00000340621 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
CCDC144A-202ENST00000340621 ABCC2Q92887 1545 aa22.48■■□□□ 1.19
CCDC144A-202ENST00000340621 HSPA5P11021 654 aaKnown RBP22.47■■□□□ 1.19
CCDC144A-202ENST00000340621 PKD2Q13563 968 aa22.46■■□□□ 1.19
CCDC144A-202ENST00000340621 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
CCDC144A-202ENST00000340621 NBPF8Q3BBV2 869 aa22.45■■□□□ 1.18
CCDC144A-202ENST00000340621 KIAA1107Q9UPP5 1409 aa22.44■■□□□ 1.18
CCDC144A-202ENST00000340621 ARHGEF5Q12774 1597 aa22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 NUP155O75694 1391 aa22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 RSPH4AQ5TD94 716 aa22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 CDC42BPBQ9Y5S2 1711 aa22.42■■□□□ 1.18
CCDC144A-202ENST00000340621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
CCDC144A-202ENST00000340621 PREX2Q70Z35 1606 aa22.41■■□□□ 1.18
CCDC144A-202ENST00000340621 ANP32CO43423 234 aa22.39■■□□□ 1.18
CCDC144A-202ENST00000340621 CCDC141Q6ZP82 1450 aa22.39■■□□□ 1.18
CCDC144A-202ENST00000340621 TTC37Q6PGP7 1564 aa22.39■■□□□ 1.18
CCDC144A-202ENST00000340621 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
CCDC144A-202ENST00000340621 ARHGAP5Q13017 1502 aa22.37■■□□□ 1.17
CCDC144A-202ENST00000340621 UHRF1BP1LA0JNW5 1464 aa22.35■■□□□ 1.17
CCDC144A-202ENST00000340621 SYCP2Q9BX26 1530 aa22.33■■□□□ 1.17
CCDC144A-202ENST00000340621 CCER2I3L3R5 266 aa22.33■■□□□ 1.16
CCDC144A-202ENST00000340621 C11orf95C9JLR9 678 aaPredicted RBP22.3■■□□□ 1.16
CCDC144A-202ENST00000340621 ZCCHC11Q5TAX3 1644 aaKnown RBP22.3■■□□□ 1.16
CCDC144A-202ENST00000340621 KDM5DQ9BY66 1539 aa22.29■■□□□ 1.16
CCDC144A-202ENST00000340621 PLCH2O75038 1416 aa22.29■■□□□ 1.16
CCDC144A-202ENST00000340621 EFCAB2Q5VUJ9 269 aa22.27■■□□□ 1.16
CCDC144A-202ENST00000340621 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
CCDC144A-202ENST00000340621 ARHGEF12Q9NZN5 1544 aa22.26■■□□□ 1.15
CCDC144A-202ENST00000340621 SPATA31E1Q6ZUB1 1445 aa22.25■■□□□ 1.15
CCDC144A-202ENST00000340621 MYO5CQ9NQX4 1742 aa22.24■■□□□ 1.15
CCDC144A-202ENST00000340621 ZNF326Q5BKZ1 582 aaKnown RBP22.24■■□□□ 1.15
CCDC144A-202ENST00000340621 MAST1Q9Y2H9 1570 aa22.23■■□□□ 1.15
CCDC144A-202ENST00000340621 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
CCDC144A-202ENST00000340621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCDC144A-202ENST00000340621 FAM135AQ9P2D6 1515 aa22.2■■□□□ 1.14
CCDC144A-202ENST00000340621 KIF7Q2M1P5 1343 aa22.16■■□□□ 1.14
CCDC144A-202ENST00000340621 TRAPPC8Q9Y2L5 1435 aa22.15■■□□□ 1.14
CCDC144A-202ENST00000340621 UHRF1BP1Q6BDS2 1440 aa22.15■■□□□ 1.14
CCDC144A-202ENST00000340621 CNTLNQ9NXG0 1405 aa22.15■■□□□ 1.14
CCDC144A-202ENST00000340621 KDM2AQ9Y2K7 1162 aa22.15■■□□□ 1.14
CCDC144A-202ENST00000340621 PLXNC1O60486 1568 aa22.14■■□□□ 1.13
CCDC144A-202ENST00000340621 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
CCDC144A-202ENST00000340621 AFAP1Q8N556 730 aa22.12■■□□□ 1.13
CCDC144A-202ENST00000340621 USP47Q96K76 1375 aa22.12■■□□□ 1.13
CCDC144A-202ENST00000340621 ABCC1P33527 1531 aa22.12■■□□□ 1.13
CCDC144A-202ENST00000340621 DUOX2Q9NRD8 1548 aa22.12■■□□□ 1.13
CCDC144A-202ENST00000340621 WDR7Q9Y4E6 1490 aa22.11■■□□□ 1.13
CCDC144A-202ENST00000340621 UNC13BO14795 1591 aa22.1■■□□□ 1.13
CCDC144A-202ENST00000340621 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
CCDC144A-202ENST00000340621 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
CCDC144A-202ENST00000340621 SPAG9O60271 1321 aaKnown RBP22.08■■□□□ 1.13
CCDC144A-202ENST00000340621 ERBINQ96RT1 1412 aa22.08■■□□□ 1.13
CCDC144A-202ENST00000340621 CCDC144AA2RUR9 1427 aa22.08■■□□□ 1.12
CCDC144A-202ENST00000340621 CARD11Q9BXL7 1154 aa22.07■■□□□ 1.12
CCDC144A-202ENST00000340621 ARAP3Q8WWN8 1544 aa22.06■■□□□ 1.12
CCDC144A-202ENST00000340621 RALGAPBQ86X10 1494 aa22.06■■□□□ 1.12
CCDC144A-202ENST00000340621 RGL3Q3MIN7 710 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms