RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 GTF2E1P29083 439 aaPredicted RBP9.42□□□□□ -0.9
ABCA9-201ENST00000340001 CREBRFQ8IUR6 639 aa9.42□□□□□ -0.9
ABCA9-201ENST00000340001 PLEKHD1A6NEE1 506 aa9.41□□□□□ -0.9
ABCA9-201ENST00000340001 FRAT2O75474 233 aaPredicted RBP9.41□□□□□ -0.9
ABCA9-201ENST00000340001 SRPK2P78362 688 aaKnown RBP9.41□□□□□ -0.9
ABCA9-201ENST00000340001 KNSTRNQ9Y448 316 aa9.4□□□□□ -0.9
ABCA9-201ENST00000340001 SYTL4Q96C24 671 aaPredicted RBP9.4□□□□□ -0.9
ABCA9-201ENST00000340001 CWC22Q9HCG8 908 aaKnown RBP9.39□□□□□ -0.91
ABCA9-201ENST00000340001 MAPK8IP3Q9UPT6 1336 aa9.39□□□□□ -0.91
ABCA9-201ENST00000340001 KANK4Q5T7N3 995 aaPredicted RBP9.39□□□□□ -0.91
ABCA9-201ENST00000340001 GNL2Q13823 731 aaKnown RBP9.39□□□□□ -0.91
ABCA9-201ENST00000340001 ANP32EQ9BTT0 268 aa9.38□□□□□ -0.91
ABCA9-201ENST00000340001 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
ABCA9-201ENST00000340001 WDR70Q9NW82 654 aa9.38□□□□□ -0.91
ABCA9-201ENST00000340001 CEP164Q9UPV0 1460 aa9.37□□□□□ -0.91
ABCA9-201ENST00000340001 TNIKQ9UKE5 1360 aa9.37□□□□□ -0.91
ABCA9-201ENST00000340001 NGEFQ8N5V2 710 aa9.37□□□□□ -0.91
ABCA9-201ENST00000340001 TAF7LQ5H9L4 462 aa9.36□□□□□ -0.91
ABCA9-201ENST00000340001 TRIM44Q96DX7 344 aaPredicted RBP9.36□□□□□ -0.91
ABCA9-201ENST00000340001 KIF27Q86VH2 1401 aa9.36□□□□□ -0.91
ABCA9-201ENST00000340001 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
ABCA9-201ENST00000340001 CASC1Q6TDU7 716 aa9.35□□□□□ -0.91
ABCA9-201ENST00000340001 TOMM22Q9NS69 142 aa9.35□□□□□ -0.91
ABCA9-201ENST00000340001 IBSPP21815 317 aaPredicted RBP9.34□□□□□ -0.91
ABCA9-201ENST00000340001 EVA1CP58658 441 aa9.34□□□□□ -0.91
ABCA9-201ENST00000340001 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
ABCA9-201ENST00000340001 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
ABCA9-201ENST00000340001 BECN1Q14457 450 aa9.34□□□□□ -0.91
ABCA9-201ENST00000340001 ARID3AQ99856 593 aa9.34□□□□□ -0.91
ABCA9-201ENST00000340001 GORABQ5T7V8 394 aa9.34□□□□□ -0.91
ABCA9-201ENST00000340001 HSPA5P11021 654 aaKnown RBP9.33□□□□□ -0.92
ABCA9-201ENST00000340001 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
ABCA9-201ENST00000340001 CCNB3Q8WWL7 1395 aa9.32□□□□□ -0.92
ABCA9-201ENST00000340001 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
ABCA9-201ENST00000340001 WIZO95785 1651 aa9.32□□□□□ -0.92
ABCA9-201ENST00000340001 CCDC88BA6NC98 1476 aa9.32□□□□□ -0.92
ABCA9-201ENST00000340001 CUX2O14529 1486 aa9.32□□□□□ -0.92
ABCA9-201ENST00000340001 NOC3LQ8WTT2 800 aaKnown RBP9.31□□□□□ -0.92
ABCA9-201ENST00000340001 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
ABCA9-201ENST00000340001 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
ABCA9-201ENST00000340001 SLC4A3P48751 1232 aa9.31□□□□□ -0.92
ABCA9-201ENST00000340001 HSP90B1P14625 803 aaKnown RBP9.3□□□□□ -0.92
ABCA9-201ENST00000340001 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
ABCA9-201ENST00000340001 MARCH6O60337 910 aa9.29□□□□□ -0.92
ABCA9-201ENST00000340001 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
ABCA9-201ENST00000340001 RASSF8Q8NHQ8 419 aa9.29□□□□□ -0.92
ABCA9-201ENST00000340001 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
ABCA9-201ENST00000340001 EEA1Q15075 1411 aa9.29□□□□□ -0.92
ABCA9-201ENST00000340001 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
ABCA9-201ENST00000340001 GOLGA6L4A6NEF3 574 aa9.28□□□□□ -0.92
ABCA9-201ENST00000340001 NOL8Q76FK4 1167 aaKnown RBP9.28□□□□□ -0.92
ABCA9-201ENST00000340001 DRC7Q8IY82 874 aa9.28□□□□□ -0.92
ABCA9-201ENST00000340001 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
ABCA9-201ENST00000340001 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
ABCA9-201ENST00000340001 PIP4K2BP78356 416 aa9.27□□□□□ -0.92
ABCA9-201ENST00000340001 HSP90AB1P08238 724 aaKnown RBP9.27□□□□□ -0.93
ABCA9-201ENST00000340001 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
ABCA9-201ENST00000340001 CARMIL1Q5VZK9 1371 aa9.26□□□□□ -0.93
ABCA9-201ENST00000340001 NUDCQ9Y266 331 aa9.26□□□□□ -0.93
ABCA9-201ENST00000340001 CCDC146Q8IYE0 955 aa9.26□□□□□ -0.93
ABCA9-201ENST00000340001 GLIPR1L2Q4G1C9 344 aa9.26□□□□□ -0.93
ABCA9-201ENST00000340001 NUTM2BA6NNL0 878 aaPredicted RBP9.26□□□□□ -0.93
ABCA9-201ENST00000340001 NUTM2EB1AL46 878 aaPredicted RBP9.26□□□□□ -0.93
ABCA9-201ENST00000340001 GOLGA6L22H0YM25 854 aa9.26□□□□□ -0.93
ABCA9-201ENST00000340001 NUTM2AQ8IVF1 878 aaPredicted RBP9.26□□□□□ -0.93
ABCA9-201ENST00000340001 ZNF428Q96B54 188 aa9.26□□□□□ -0.93
ABCA9-201ENST00000340001 NACADO15069 1562 aa9.26□□□□□ -0.93
ABCA9-201ENST00000340001 PKD2Q13563 968 aa9.25□□□□□ -0.93
ABCA9-201ENST00000340001 RAB3GAP2Q9H2M9 1393 aa9.25□□□□□ -0.93
ABCA9-201ENST00000340001 MTMR7Q9Y216 660 aa9.25□□□□□ -0.93
ABCA9-201ENST00000340001 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
ABCA9-201ENST00000340001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
ABCA9-201ENST00000340001 DEKP35659 375 aaKnown RBP9.24□□□□□ -0.93
ABCA9-201ENST00000340001 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
ABCA9-201ENST00000340001 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
ABCA9-201ENST00000340001 CYB5RLQ6IPT4 315 aa9.24□□□□□ -0.93
ABCA9-201ENST00000340001 NGDNQ8NEJ9 315 aaKnown RBP9.24□□□□□ -0.93
ABCA9-201ENST00000340001 FAM177BA6PVY3 158 aa9.24□□□□□ -0.93
ABCA9-201ENST00000340001 ARHGAP35Q9NRY4 1499 aa9.24□□□□□ -0.93
ABCA9-201ENST00000340001 SLC4A10Q6U841 1118 aa9.24□□□□□ -0.93
ABCA9-201ENST00000340001 TRIM34Q9BYJ4 488 aa9.24□□□□□ -0.93
ABCA9-201ENST00000340001 TMF1P82094 1093 aa9.23□□□□□ -0.93
ABCA9-201ENST00000340001 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
ABCA9-201ENST00000340001 TCEAL9Q9UHQ7 104 aa9.23□□□□□ -0.93
ABCA9-201ENST00000340001 A0A0U1RQG5 324 aaPredicted RBP9.23□□□□□ -0.93
ABCA9-201ENST00000340001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.23□□□□□ -0.93
ABCA9-201ENST00000340001 PES1O00541 588 aaKnown RBP9.22□□□□□ -0.93
ABCA9-201ENST00000340001 MORC1Q86VD1 984 aa9.22□□□□□ -0.93
ABCA9-201ENST00000340001 L1TD1Q5T7N2 865 aaKnown RBP9.22□□□□□ -0.93
ABCA9-201ENST00000340001 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
ABCA9-201ENST00000340001 FOXD4L1Q9NU39 408 aa9.21□□□□□ -0.93
ABCA9-201ENST00000340001 ROCK2O75116 1388 aaKnown RBP9.21□□□□□ -0.94
ABCA9-201ENST00000340001 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.94
ABCA9-201ENST00000340001 NECTIN2Q92692 538 aa9.21□□□□□ -0.94
ABCA9-201ENST00000340001 SLKQ9H2G2 1235 aaPredicted RBP9.21□□□□□ -0.94
ABCA9-201ENST00000340001 MYCNP04198 464 aaPredicted RBP9.21□□□□□ -0.94
ABCA9-201ENST00000340001 KDM4AO75164 1064 aa9.2□□□□□ -0.94
ABCA9-201ENST00000340001 PPM1FP49593 454 aaPredicted RBP9.2□□□□□ -0.94
ABCA9-201ENST00000340001 HNRNPMP52272 730 aaKnown RBP eCLIP9.2□□□□□ -0.94
ABCA9-201ENST00000340001 RUSC2Q8N2Y8 1516 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms