RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CAMSAP2Q08AD1 1489 aa22.34■■□□□ 1.17
MBD1-203ENST00000339998 YTHDC1Q96MU7 727 aaKnown RBP22.32■■□□□ 1.16
MBD1-203ENST00000339998 DENND4BO75064 1496 aaPredicted RBP22.31■■□□□ 1.16
MBD1-203ENST00000339998 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
MBD1-203ENST00000339998 DNMT1P26358 1616 aaKnown RBP22.29■■□□□ 1.16
MBD1-203ENST00000339998 MPHOSPH9Q99550 1183 aa22.29■■□□□ 1.16
MBD1-203ENST00000339998 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
MBD1-203ENST00000339998 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.16
MBD1-203ENST00000339998 GCC2Q8IWJ2 1684 aa22.28■■□□□ 1.16
MBD1-203ENST00000339998 SHROOM2Q13796 1616 aa22.27■■□□□ 1.16
MBD1-203ENST00000339998 TONSLQ96HA7 1378 aa22.27■■□□□ 1.16
MBD1-203ENST00000339998 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
MBD1-203ENST00000339998 ADCY10Q96PN6 1610 aa22.25■■□□□ 1.15
MBD1-203ENST00000339998 CDC42BPAQ5VT25 1732 aa22.25■■□□□ 1.15
MBD1-203ENST00000339998 AKNAQ7Z591 1439 aa22.24■■□□□ 1.15
MBD1-203ENST00000339998 ITSN2Q9NZM3 1697 aa22.22■■□□□ 1.15
MBD1-203ENST00000339998 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
MBD1-203ENST00000339998 ROCK1Q13464 1354 aa22.19■■□□□ 1.14
MBD1-203ENST00000339998 NCOA1Q15788 1441 aa22.19■■□□□ 1.14
MBD1-203ENST00000339998 CLASP1Q7Z460 1538 aa22.19■■□□□ 1.14
MBD1-203ENST00000339998 TIMELESSQ9UNS1 1208 aa22.14■■□□□ 1.14
MBD1-203ENST00000339998 ABCC2Q92887 1545 aa22.13■■□□□ 1.13
MBD1-203ENST00000339998 DDX10Q13206 875 aaKnown RBP22.13■■□□□ 1.13
MBD1-203ENST00000339998 TSPY4P0CV99 314 aa22.12■■□□□ 1.13
MBD1-203ENST00000339998 TSPY10P0CW01 314 aa22.12■■□□□ 1.13
MBD1-203ENST00000339998 TTC37Q6PGP7 1564 aa22.11■■□□□ 1.13
MBD1-203ENST00000339998 CDC42BPBQ9Y5S2 1711 aa22.1■■□□□ 1.13
MBD1-203ENST00000339998 C9orf84Q5VXU9 1444 aa22.1■■□□□ 1.13
MBD1-203ENST00000339998 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
MBD1-203ENST00000339998 ANKRD30AQ9BXX3 1397 aa22.1■■□□□ 1.13
MBD1-203ENST00000339998 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
MBD1-203ENST00000339998 KDM5BQ9UGL1 1544 aa22.08■■□□□ 1.13
MBD1-203ENST00000339998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.08■■□□□ 1.13
MBD1-203ENST00000339998 SAMD9LQ8IVG5 1584 aa22.07■■□□□ 1.12
MBD1-203ENST00000339998 ANKRD50Q9ULJ7 1429 aa22.07■■□□□ 1.12
MBD1-203ENST00000339998 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
MBD1-203ENST00000339998 MBD5Q9P267 1494 aa22.06■■□□□ 1.12
MBD1-203ENST00000339998 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
MBD1-203ENST00000339998 ANKRD30BQ9BXX2 1392 aa22.06■■□□□ 1.12
MBD1-203ENST00000339998 PKD2Q13563 968 aa22.05■■□□□ 1.12
MBD1-203ENST00000339998 PZPP20742 1482 aa22.05■■□□□ 1.12
MBD1-203ENST00000339998 ARHGAP5Q13017 1502 aa22.05■■□□□ 1.12
MBD1-203ENST00000339998 ADGBQ8N7X0 1667 aa22.04■■□□□ 1.12
MBD1-203ENST00000339998 ZCCHC11Q5TAX3 1644 aaKnown RBP22.03■■□□□ 1.12
MBD1-203ENST00000339998 ADGRL2O95490 1459 aa22.03■■□□□ 1.12
MBD1-203ENST00000339998 KIF15Q9NS87 1388 aa22.02■■□□□ 1.11
MBD1-203ENST00000339998 SYCP2Q9BX26 1530 aa22.01■■□□□ 1.11
MBD1-203ENST00000339998 NUP155O75694 1391 aa22.01■■□□□ 1.11
MBD1-203ENST00000339998 PREX2Q70Z35 1606 aa22.01■■□□□ 1.11
MBD1-203ENST00000339998 NBPF8Q3BBV2 869 aa21.98■■□□□ 1.11
MBD1-203ENST00000339998 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
MBD1-203ENST00000339998 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
MBD1-203ENST00000339998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.11
MBD1-203ENST00000339998 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
MBD1-203ENST00000339998 ARHGEF12Q9NZN5 1544 aa21.95■■□□□ 1.11
MBD1-203ENST00000339998 ZNF326Q5BKZ1 582 aaKnown RBP21.95■■□□□ 1.1
MBD1-203ENST00000339998 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
MBD1-203ENST00000339998 SHANK2Q9UPX8 1470 aa21.93■■□□□ 1.1
MBD1-203ENST00000339998 HSPA5P11021 654 aaKnown RBP21.93■■□□□ 1.1
MBD1-203ENST00000339998 UHRF1BP1LA0JNW5 1464 aa21.92■■□□□ 1.1
MBD1-203ENST00000339998 MYO5CQ9NQX4 1742 aa21.91■■□□□ 1.1
MBD1-203ENST00000339998 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
MBD1-203ENST00000339998 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
MBD1-203ENST00000339998 KIAA1107Q9UPP5 1409 aa21.9■■□□□ 1.1
MBD1-203ENST00000339998 EFCAB2Q5VUJ9 269 aa21.89■■□□□ 1.1
MBD1-203ENST00000339998 PLCH2O75038 1416 aa21.89■■□□□ 1.09
MBD1-203ENST00000339998 TEX14Q8IWB6 1497 aa21.87■■□□□ 1.09
MBD1-203ENST00000339998 TRAPPC8Q9Y2L5 1435 aa21.87■■□□□ 1.09
MBD1-203ENST00000339998 GTF3C3Q9Y5Q9 886 aa21.87■■□□□ 1.09
MBD1-203ENST00000339998 RSPH4AQ5TD94 716 aa21.84■■□□□ 1.09
MBD1-203ENST00000339998 C11orf95C9JLR9 678 aaPredicted RBP21.84■■□□□ 1.09
MBD1-203ENST00000339998 PLEKHH2Q8IVE3 1493 aa21.83■■□□□ 1.09
MBD1-203ENST00000339998 KDM2AQ9Y2K7 1162 aa21.83■■□□□ 1.09
MBD1-203ENST00000339998 EIF4G2P78344 907 aaKnown RBP eCLIP21.81■■□□□ 1.08
MBD1-203ENST00000339998 WDR7Q9Y4E6 1490 aa21.81■■□□□ 1.08
MBD1-203ENST00000339998 WASHC2AQ641Q2 1341 aa21.8■■□□□ 1.08
MBD1-203ENST00000339998 MYT1LQ9UL68 1186 aa21.79■■□□□ 1.08
MBD1-203ENST00000339998 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
MBD1-203ENST00000339998 RGL3Q3MIN7 710 aa21.76■■□□□ 1.07
MBD1-203ENST00000339998 FAM135AQ9P2D6 1515 aa21.76■■□□□ 1.07
MBD1-203ENST00000339998 ABCC1P33527 1531 aa21.75■■□□□ 1.07
MBD1-203ENST00000339998 SPAG9O60271 1321 aaKnown RBP21.75■■□□□ 1.07
MBD1-203ENST00000339998 NPM1P06748 294 aaKnown RBP eCLIP21.74■■□□□ 1.07
MBD1-203ENST00000339998 DCAF11Q8TEB1 546 aa21.73■■□□□ 1.07
MBD1-203ENST00000339998 FANCAO15360 1455 aa21.72■■□□□ 1.07
MBD1-203ENST00000339998 MAST1Q9Y2H9 1570 aa21.7■■□□□ 1.06
MBD1-203ENST00000339998 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
MBD1-203ENST00000339998 ANP32CO43423 234 aa21.7■■□□□ 1.06
MBD1-203ENST00000339998 POLR3GLQ9BT43 218 aa21.69■■□□□ 1.06
MBD1-203ENST00000339998 CNGB1Q14028 1251 aaPredicted RBP21.68■■□□□ 1.06
MBD1-203ENST00000339998 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
MBD1-203ENST00000339998 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
MBD1-203ENST00000339998 PLA2R1Q13018 1463 aa21.66■■□□□ 1.06
MBD1-203ENST00000339998 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
MBD1-203ENST00000339998 DUOX2Q9NRD8 1548 aa21.64■■□□□ 1.06
MBD1-203ENST00000339998 ADGRL1O94910 1474 aa21.63■■□□□ 1.05
MBD1-203ENST00000339998 ABCA9Q8IUA7 1624 aa21.63■■□□□ 1.05
MBD1-203ENST00000339998 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
MBD1-203ENST00000339998 CCDC144AA2RUR9 1427 aa21.62■■□□□ 1.05
MBD1-203ENST00000339998 KIF7Q2M1P5 1343 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms