RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
VSTM1-201ENST00000338372 POGZQ7Z3K3 1410 aa27.96■■■□□ 2.07
VSTM1-201ENST00000338372 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.07
VSTM1-201ENST00000338372 MADDQ8WXG6 1647 aa27.95■■■□□ 2.06
VSTM1-201ENST00000338372 CDC42BPBQ9Y5S2 1711 aa27.95■■■□□ 2.06
VSTM1-201ENST00000338372 ZFYVE16Q7Z3T8 1539 aa27.93■■■□□ 2.06
VSTM1-201ENST00000338372 EFCAB2Q5VUJ9 269 aa27.92■■■□□ 2.06
VSTM1-201ENST00000338372 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.06
VSTM1-201ENST00000338372 CLIP1P30622 1438 aa27.87■■■□□ 2.05
VSTM1-201ENST00000338372 FYCO1Q9BQS8 1478 aa27.87■■■□□ 2.05
VSTM1-201ENST00000338372 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
VSTM1-201ENST00000338372 KDM5CP41229 1560 aa27.85■■■□□ 2.05
VSTM1-201ENST00000338372 PREX2Q70Z35 1606 aa27.84■■■□□ 2.05
VSTM1-201ENST00000338372 RIMS1Q86UR5 1692 aaKnown RBP27.84■■■□□ 2.05
VSTM1-201ENST00000338372 ARHGAP5Q13017 1502 aa27.83■■■□□ 2.05
VSTM1-201ENST00000338372 CDC42BPAQ5VT25 1732 aa27.82■■■□□ 2.04
VSTM1-201ENST00000338372 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
VSTM1-201ENST00000338372 ATP10AO60312 1499 aa27.8■■■□□ 2.04
VSTM1-201ENST00000338372 ZNF518AQ6AHZ1 1483 aa27.79■■■□□ 2.04
VSTM1-201ENST00000338372 AFAP1Q8N556 730 aa27.79■■■□□ 2.04
VSTM1-201ENST00000338372 ABCC1P33527 1531 aa27.76■■■□□ 2.03
VSTM1-201ENST00000338372 ITSN2Q9NZM3 1697 aa27.74■■■□□ 2.03
VSTM1-201ENST00000338372 C9orf84Q5VXU9 1444 aa27.74■■■□□ 2.03
VSTM1-201ENST00000338372 TRAPPC8Q9Y2L5 1435 aa27.73■■■□□ 2.03
VSTM1-201ENST00000338372 LMTK3Q96Q04 1460 aa27.72■■■□□ 2.03
VSTM1-201ENST00000338372 FER1L4A9Z1Z3 1794 aa27.72■■■□□ 2.03
VSTM1-201ENST00000338372 DIP2CQ9Y2E4 1556 aa27.72■■■□□ 2.03
VSTM1-201ENST00000338372 MLH3Q9UHC1 1453 aa27.71■■■□□ 2.03
VSTM1-201ENST00000338372 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
VSTM1-201ENST00000338372 GPATCH8Q9UKJ3 1502 aaKnown RBP27.69■■■□□ 2.02
VSTM1-201ENST00000338372 ABCA6Q8N139 1617 aa27.69■■■□□ 2.02
VSTM1-201ENST00000338372 KIDINS220Q9ULH0 1771 aa27.66■■■□□ 2.02
VSTM1-201ENST00000338372 SAMD9LQ8IVG5 1584 aa27.66■■■□□ 2.02
VSTM1-201ENST00000338372 MLECQ14165 292 aa27.65■■■□□ 2.02
VSTM1-201ENST00000338372 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
VSTM1-201ENST00000338372 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
VSTM1-201ENST00000338372 AGLP35573 1532 aa27.59■■■□□ 2.01
VSTM1-201ENST00000338372 SYCP2Q9BX26 1530 aa27.56■■■□□ 2
VSTM1-201ENST00000338372 KIAA1107Q9UPP5 1409 aa27.53■■■□□ 2
VSTM1-201ENST00000338372 TIAM1Q13009 1591 aa27.52■■■□□ 2
VSTM1-201ENST00000338372 HNRNPMP52272 730 aaKnown RBP eCLIP27.51■■□□□ 1.99
VSTM1-201ENST00000338372 MTUS2Q5JR59 1369 aa27.5■■□□□ 1.99
VSTM1-201ENST00000338372 CEBPAP49715 358 aaPredicted RBP27.5■■□□□ 1.99
VSTM1-201ENST00000338372 HSPA2P54652 639 aa27.5■■□□□ 1.99
VSTM1-201ENST00000338372 ZNF777Q9ULD5 760 aaPredicted RBP27.5■■□□□ 1.99
VSTM1-201ENST00000338372 PLPPR3Q6T4P5 718 aa27.49■■□□□ 1.99
VSTM1-201ENST00000338372 EHBP1L1Q8N3D4 1523 aa27.49■■□□□ 1.99
VSTM1-201ENST00000338372 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
VSTM1-201ENST00000338372 SETD1BQ9UPS6 1966 aaKnown RBP27.48■■□□□ 1.99
VSTM1-201ENST00000338372 CFDP1Q9UEE9 299 aaPredicted RBP27.47■■□□□ 1.99
VSTM1-201ENST00000338372 INO80Q9ULG1 1556 aaPredicted RBP27.47■■□□□ 1.99
VSTM1-201ENST00000338372 PREX1Q8TCU6 1659 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 MYT1LQ9UL68 1186 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 C3P01024 1663 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 PLEKHH2Q8IVE3 1493 aa27.44■■□□□ 1.98
VSTM1-201ENST00000338372 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
VSTM1-201ENST00000338372 ZNF644Q9H582 1327 aaPredicted RBP27.43■■□□□ 1.98
VSTM1-201ENST00000338372 ATP7AQ04656 1500 aa27.42■■□□□ 1.98
VSTM1-201ENST00000338372 SPAG9O60271 1321 aaKnown RBP27.41■■□□□ 1.98
VSTM1-201ENST00000338372 PLXNC1O60486 1568 aa27.41■■□□□ 1.98
VSTM1-201ENST00000338372 SUPT6HQ7KZ85 1726 aaKnown RBP27.38■■□□□ 1.97
VSTM1-201ENST00000338372 STRCQ7RTU9 1775 aa27.37■■□□□ 1.97
VSTM1-201ENST00000338372 NCOA2Q15596 1464 aa27.35■■□□□ 1.97
VSTM1-201ENST00000338372 VPS8Q8N3P4 1428 aa27.33■■□□□ 1.97
VSTM1-201ENST00000338372 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
VSTM1-201ENST00000338372 A2MP01023 1474 aa27.32■■□□□ 1.96
VSTM1-201ENST00000338372 ADGBQ8N7X0 1667 aa27.31■■□□□ 1.96
VSTM1-201ENST00000338372 CNTLNQ9NXG0 1405 aa27.31■■□□□ 1.96
VSTM1-201ENST00000338372 RTEL1-TNFRSF6BF6WH68 1400 aa27.29■■□□□ 1.96
VSTM1-201ENST00000338372 UHRF1BP1Q6BDS2 1440 aa27.27■■□□□ 1.96
VSTM1-201ENST00000338372 FBXO41Q8TF61 875 aa27.27■■□□□ 1.96
VSTM1-201ENST00000338372 LRRC9Q6ZRR7 1453 aa27.26■■□□□ 1.95
VSTM1-201ENST00000338372 CAMSAP2Q08AD1 1489 aa27.25■■□□□ 1.95
VSTM1-201ENST00000338372 ZMYM3Q14202 1370 aa27.24■■□□□ 1.95
VSTM1-201ENST00000338372 CLTCQ00610 1675 aaKnown RBP27.24■■□□□ 1.95
VSTM1-201ENST00000338372 MAP3K1Q13233 1512 aa27.24■■□□□ 1.95
VSTM1-201ENST00000338372 KANK4Q5T7N3 995 aaPredicted RBP27.21■■□□□ 1.95
VSTM1-201ENST00000338372 NPATQ14207 1427 aa27.21■■□□□ 1.95
VSTM1-201ENST00000338372 ESF1Q9H501 851 aaKnown RBP27.2■■□□□ 1.94
VSTM1-201ENST00000338372 DHX29Q7Z478 1369 aaKnown RBP27.2■■□□□ 1.94
VSTM1-201ENST00000338372 CCDC141Q6ZP82 1450 aa27.19■■□□□ 1.94
VSTM1-201ENST00000338372 ARHGEF5Q12774 1597 aa27.19■■□□□ 1.94
VSTM1-201ENST00000338372 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
VSTM1-201ENST00000338372 PPP6R1Q9UPN7 881 aa27.15■■□□□ 1.94
VSTM1-201ENST00000338372 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
VSTM1-201ENST00000338372 GGT6Q6P531 493 aa27.14■■□□□ 1.94
VSTM1-201ENST00000338372 PTPRTO14522 1441 aa27.11■■□□□ 1.93
VSTM1-201ENST00000338372 NCOA1Q15788 1441 aa27.1■■□□□ 1.93
VSTM1-201ENST00000338372 CERKQ8TCT0 537 aa27.1■■□□□ 1.93
VSTM1-201ENST00000338372 ZNF142P52746 1687 aaPredicted RBP27.1■■□□□ 1.93
VSTM1-201ENST00000338372 DMRT2Q9Y5R5 561 aa27.08■■□□□ 1.93
VSTM1-201ENST00000338372 MAST1Q9Y2H9 1570 aa27.08■■□□□ 1.93
VSTM1-201ENST00000338372 MYO3AQ8NEV4 1616 aa27.08■■□□□ 1.93
VSTM1-201ENST00000338372 CAMSAP1Q5T5Y3 1602 aa27.05■■□□□ 1.92
VSTM1-201ENST00000338372 MYOM3Q5VTT5 1437 aa27.05■■□□□ 1.92
VSTM1-201ENST00000338372 MIA2Q96PC5 1412 aa27.05■■□□□ 1.92
VSTM1-201ENST00000338372 KIF3BO15066 747 aa27.03■■□□□ 1.92
VSTM1-201ENST00000338372 CEP170BQ9Y4F5 1589 aaPredicted RBP27.01■■□□□ 1.92
VSTM1-201ENST00000338372 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms