RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 CDC42BPBQ9Y5S2 1711 aa38.58■■■■□ 3.77
ATF4-201ENST00000337304 ABCC5O15440 1437 aa38.57■■■■□ 3.77
ATF4-201ENST00000337304 NAIPQ13075 1403 aa38.57■■■■□ 3.77
ATF4-201ENST00000337304 ZNF777Q9ULD5 760 aaPredicted RBP38.55■■■■□ 3.76
ATF4-201ENST00000337304 CHIC2Q9UKJ5 165 aa38.54■■■■□ 3.76
ATF4-201ENST00000337304 AKNAQ7Z591 1439 aa38.53■■■■□ 3.76
ATF4-201ENST00000337304 GCC2Q8IWJ2 1684 aa38.52■■■■□ 3.76
ATF4-201ENST00000337304 CLSPNQ9HAW4 1339 aa38.51■■■■□ 3.76
ATF4-201ENST00000337304 KCNH8Q96L42 1107 aa38.5■■■■□ 3.75
ATF4-201ENST00000337304 MYO5CQ9NQX4 1742 aa38.5■■■■□ 3.75
ATF4-201ENST00000337304 CROCC2H7BZ55 1655 aa38.47■■■■□ 3.75
ATF4-201ENST00000337304 WDR7Q9Y4E6 1490 aa38.45■■■■□ 3.75
ATF4-201ENST00000337304 RRP7BPQ9NSQ0 103 aa38.45■■■■□ 3.75
ATF4-201ENST00000337304 ROCK1Q13464 1354 aa38.45■■■■□ 3.75
ATF4-201ENST00000337304 SAMD9LQ8IVG5 1584 aa38.43■■■■□ 3.74
ATF4-201ENST00000337304 ARHGAP5Q13017 1502 aa38.39■■■■□ 3.74
ATF4-201ENST00000337304 ADGBQ8N7X0 1667 aa38.38■■■■□ 3.73
ATF4-201ENST00000337304 MAPKBP1O60336 1514 aa38.35■■■■□ 3.73
ATF4-201ENST00000337304 ASXL2Q76L83 1435 aa38.35■■■■□ 3.73
ATF4-201ENST00000337304 ARHGEF5Q12774 1597 aa38.35■■■■□ 3.73
ATF4-201ENST00000337304 PLCH2O75038 1416 aa38.34■■■■□ 3.73
ATF4-201ENST00000337304 KDM6BO15054 1643 aa38.33■■■■□ 3.73
ATF4-201ENST00000337304 RIMBP3CA6NJZ7 1639 aa38.33■■■■□ 3.73
ATF4-201ENST00000337304 RIMBP3BA6NNM3 1639 aa38.33■■■■□ 3.73
ATF4-201ENST00000337304 RIMBP3Q9UFD9 1639 aa38.33■■■■□ 3.73
ATF4-201ENST00000337304 MBD5Q9P267 1494 aa38.32■■■■□ 3.72
ATF4-201ENST00000337304 NPM1P06748 294 aaKnown RBP eCLIP38.31■■■■□ 3.72
ATF4-201ENST00000337304 ADGRL2O95490 1459 aa38.31■■■■□ 3.72
ATF4-201ENST00000337304 SHANK2Q9UPX8 1470 aa38.3■■■■□ 3.72
ATF4-201ENST00000337304 HNRNPMP52272 730 aaKnown RBP eCLIP38.28■■■■□ 3.72
ATF4-201ENST00000337304 NCOA1Q15788 1441 aa38.27■■■■□ 3.72
ATF4-201ENST00000337304 ABCA9Q8IUA7 1624 aa38.26■■■■□ 3.72
ATF4-201ENST00000337304 SYCP2Q9BX26 1530 aa38.24■■■■□ 3.71
ATF4-201ENST00000337304 ARAP3Q8WWN8 1544 aa38.23■■■■□ 3.71
ATF4-201ENST00000337304 C9orf84Q5VXU9 1444 aa38.22■■■■□ 3.71
ATF4-201ENST00000337304 CCDC141Q6ZP82 1450 aa38.22■■■■□ 3.71
ATF4-201ENST00000337304 PLEKHH2Q8IVE3 1493 aa38.21■■■■□ 3.71
ATF4-201ENST00000337304 KIAA1107Q9UPP5 1409 aa38.19■■■■□ 3.7
ATF4-201ENST00000337304 ANKRD30AQ9BXX3 1397 aa38.19■■■■□ 3.7
ATF4-201ENST00000337304 RSPH4AQ5TD94 716 aa38.18■■■■□ 3.7
ATF4-201ENST00000337304 EFCAB2Q5VUJ9 269 aa38.17■■■■□ 3.7
ATF4-201ENST00000337304 TSPY4P0CV99 314 aa38.16■■■■□ 3.7
ATF4-201ENST00000337304 TSPY10P0CW01 314 aa38.16■■■■□ 3.7
ATF4-201ENST00000337304 CYB5RLQ6IPT4 315 aa38.15■■■■□ 3.7
ATF4-201ENST00000337304 ABCC1P33527 1531 aa38.12■■■■□ 3.69
ATF4-201ENST00000337304 ARHGEF12Q9NZN5 1544 aa38.12■■■■□ 3.69
ATF4-201ENST00000337304 MAST1Q9Y2H9 1570 aa38.08■■■■□ 3.69
ATF4-201ENST00000337304 ACIN1Q9UKV3 1341 aaKnown RBP38.08■■■■□ 3.69
ATF4-201ENST00000337304 TRIM52Q96A61 297 aa38.06■■■■□ 3.68
ATF4-201ENST00000337304 FANCAO15360 1455 aa38.03■■■■□ 3.68
ATF4-201ENST00000337304 ANKRD50Q9ULJ7 1429 aa38.01■■■■□ 3.68
ATF4-201ENST00000337304 DENND4BO75064 1496 aaPredicted RBP38■■■■□ 3.67
ATF4-201ENST00000337304 KIF15Q9NS87 1388 aa37.98■■■■□ 3.67
ATF4-201ENST00000337304 SIN3AQ96ST3 1273 aa37.97■■■■□ 3.67
ATF4-201ENST00000337304 TRAPPC8Q9Y2L5 1435 aa37.95■■■■□ 3.67
ATF4-201ENST00000337304 PLXNC1O60486 1568 aa37.94■■■■□ 3.66
ATF4-201ENST00000337304 MPHOSPH9Q99550 1183 aa37.94■■■■□ 3.66
ATF4-201ENST00000337304 CD109Q6YHK3 1445 aa37.9■■■■□ 3.66
ATF4-201ENST00000337304 NEUROD1Q13562 356 aa37.87■■■■□ 3.65
ATF4-201ENST00000337304 ADGRL1O94910 1474 aa37.86■■■■□ 3.65
ATF4-201ENST00000337304 PZPP20742 1482 aa37.85■■■■□ 3.65
ATF4-201ENST00000337304 CFAP74Q9C0B2 1584 aa37.83■■■■□ 3.65
ATF4-201ENST00000337304 SCAPERQ9BY12 1400 aa37.81■■■■□ 3.64
ATF4-201ENST00000337304 AFAP1Q8N556 730 aa37.8■■■■□ 3.64
ATF4-201ENST00000337304 SLC4A1APQ9BWU0 796 aaKnown RBP37.78■■■■□ 3.64
ATF4-201ENST00000337304 RTEL1-TNFRSF6BF6WH68 1400 aa37.78■■■■□ 3.64
ATF4-201ENST00000337304 TIMELESSQ9UNS1 1208 aa37.78■■■■□ 3.64
ATF4-201ENST00000337304 ZFYVE16Q7Z3T8 1539 aa37.77■■■■□ 3.64
ATF4-201ENST00000337304 DUOX2Q9NRD8 1548 aa37.76■■■■□ 3.64
ATF4-201ENST00000337304 SPAG9O60271 1321 aaKnown RBP37.76■■■■□ 3.64
ATF4-201ENST00000337304 KDM5DQ9BY66 1539 aa37.76■■■■□ 3.64
ATF4-201ENST00000337304 GLI2P10070 1586 aa37.75■■■■□ 3.63
ATF4-201ENST00000337304 MAP3K4Q9Y6R4 1608 aa37.75■■■■□ 3.63
ATF4-201ENST00000337304 INO80Q9ULG1 1556 aaPredicted RBP37.72■■■■□ 3.63
ATF4-201ENST00000337304 FOXD1Q16676 465 aa37.72■■■■□ 3.63
ATF4-201ENST00000337304 NUP155O75694 1391 aa37.7■■■■□ 3.63
ATF4-201ENST00000337304 ATP7AQ04656 1500 aa37.69■■■■□ 3.62
ATF4-201ENST00000337304 ERBINQ96RT1 1412 aa37.68■■■■□ 3.62
ATF4-201ENST00000337304 ANKRD30BQ9BXX2 1392 aa37.68■■■■□ 3.62
ATF4-201ENST00000337304 UNC13BO14795 1591 aa37.67■■■■□ 3.62
ATF4-201ENST00000337304 DIP2BQ9P265 1576 aa37.67■■■■□ 3.62
ATF4-201ENST00000337304 NEO1Q92859 1461 aa37.66■■■■□ 3.62
ATF4-201ENST00000337304 ZNF518AQ6AHZ1 1483 aa37.64■■■■□ 3.62
ATF4-201ENST00000337304 TONSLQ96HA7 1378 aa37.63■■■■□ 3.61
ATF4-201ENST00000337304 ZNF316A6NFI3 1004 aaPredicted RBP37.6■■■■□ 3.61
ATF4-201ENST00000337304 PKD2Q13563 968 aa37.59■■■■□ 3.61
ATF4-201ENST00000337304 POGZQ7Z3K3 1410 aa37.59■■■■□ 3.61
ATF4-201ENST00000337304 KIDINS220Q9ULH0 1771 aa37.57■■■■□ 3.61
ATF4-201ENST00000337304 KDM5CP41229 1560 aa37.57■■■■□ 3.6
ATF4-201ENST00000337304 FAM135AQ9P2D6 1515 aa37.57■■■■□ 3.6
ATF4-201ENST00000337304 FAM69CQ0P6D2 419 aa37.55■■■■□ 3.6
ATF4-201ENST00000337304 PPP1R15AO75807 674 aaPredicted RBP37.54■■■■□ 3.6
ATF4-201ENST00000337304 MAGI2Q86UL8 1455 aa37.54■■■■□ 3.6
ATF4-201ENST00000337304 RPRD2Q5VT52 1461 aaKnown RBP37.52■■■■□ 3.6
ATF4-201ENST00000337304 IQGAP3Q86VI3 1631 aa37.52■■■■□ 3.6
ATF4-201ENST00000337304 MYT1LQ9UL68 1186 aa37.49■■■■□ 3.59
ATF4-201ENST00000337304 MLH3Q9UHC1 1453 aa37.46■■■■□ 3.59
ATF4-201ENST00000337304 HECW2Q9P2P5 1572 aa37.46■■■■□ 3.59
ATF4-201ENST00000337304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.46■■■■□ 3.594e-8■□□□□ 8.7
ATF4-201ENST00000337304 PPRC1Q5VV67 1664 aaKnown RBP37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms