RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ARHGAP5Q13017 1502 aa23.93■■□□□ 1.42
KATNA1-201ENST00000335643 SCAPERQ9BY12 1400 aa23.9■■□□□ 1.42
KATNA1-201ENST00000335643 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
KATNA1-201ENST00000335643 ZMYM4Q5VZL5 1548 aa23.88■■□□□ 1.41
KATNA1-201ENST00000335643 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
KATNA1-201ENST00000335643 VPS8Q8N3P4 1428 aa23.88■■□□□ 1.41
KATNA1-201ENST00000335643 ARHGEF40Q8TER5 1519 aa23.86■■□□□ 1.41
KATNA1-201ENST00000335643 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
KATNA1-201ENST00000335643 SIGLEC1Q9BZZ2 1709 aa23.83■■□□□ 1.41
KATNA1-201ENST00000335643 EHBP1L1Q8N3D4 1523 aa23.83■■□□□ 1.41
KATNA1-201ENST00000335643 GPATCH8Q9UKJ3 1502 aaKnown RBP23.83■■□□□ 1.41
KATNA1-201ENST00000335643 YEATS2Q9ULM3 1422 aa23.83■■□□□ 1.41
KATNA1-201ENST00000335643 ARHGEF12Q9NZN5 1544 aa23.82■■□□□ 1.4
KATNA1-201ENST00000335643 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
KATNA1-201ENST00000335643 ABCC1P33527 1531 aa23.82■■□□□ 1.4
KATNA1-201ENST00000335643 ZFYVE16Q7Z3T8 1539 aa23.8■■□□□ 1.4
KATNA1-201ENST00000335643 ITSN2Q9NZM3 1697 aa23.8■■□□□ 1.4
KATNA1-201ENST00000335643 SAMD9LQ8IVG5 1584 aa23.8■■□□□ 1.4
KATNA1-201ENST00000335643 KDM5CP41229 1560 aa23.78■■□□□ 1.4
KATNA1-201ENST00000335643 ZNF518AQ6AHZ1 1483 aa23.76■■□□□ 1.39
KATNA1-201ENST00000335643 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
KATNA1-201ENST00000335643 MAGI2Q86UL8 1455 aa23.76■■□□□ 1.39
KATNA1-201ENST00000335643 TRAPPC8Q9Y2L5 1435 aa23.75■■□□□ 1.39
KATNA1-201ENST00000335643 BCORL1Q5H9F3 1711 aa23.74■■□□□ 1.39
KATNA1-201ENST00000335643 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
KATNA1-201ENST00000335643 ADAMTSL3P82987 1691 aa23.73■■□□□ 1.39
KATNA1-201ENST00000335643 ZNF777Q9ULD5 760 aaPredicted RBP23.72■■□□□ 1.39
KATNA1-201ENST00000335643 SUPT6HQ7KZ85 1726 aaKnown RBP23.72■■□□□ 1.39
KATNA1-201ENST00000335643 SYCP2Q9BX26 1530 aa23.72■■□□□ 1.39
KATNA1-201ENST00000335643 HECW2Q9P2P5 1572 aa23.71■■□□□ 1.39
KATNA1-201ENST00000335643 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
KATNA1-201ENST00000335643 LRRC9Q6ZRR7 1453 aa23.7■■□□□ 1.38
KATNA1-201ENST00000335643 ABCA6Q8N139 1617 aa23.68■■□□□ 1.38
KATNA1-201ENST00000335643 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
KATNA1-201ENST00000335643 ARID4BQ4LE39 1312 aaPredicted RBP23.67■■□□□ 1.38
KATNA1-201ENST00000335643 KANK4Q5T7N3 995 aaPredicted RBP23.67■■□□□ 1.38
KATNA1-201ENST00000335643 DIP2CQ9Y2E4 1556 aa23.67■■□□□ 1.38
KATNA1-201ENST00000335643 MAP3K1Q13233 1512 aa23.67■■□□□ 1.38
KATNA1-201ENST00000335643 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
KATNA1-201ENST00000335643 KIDINS220Q9ULH0 1771 aa23.66■■□□□ 1.38
KATNA1-201ENST00000335643 ATP10AO60312 1499 aa23.65■■□□□ 1.38
KATNA1-201ENST00000335643 MLH3Q9UHC1 1453 aa23.65■■□□□ 1.38
KATNA1-201ENST00000335643 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
KATNA1-201ENST00000335643 HNRNPMP52272 730 aaKnown RBP eCLIP23.64■■□□□ 1.37
KATNA1-201ENST00000335643 C9orf84Q5VXU9 1444 aa23.63■■□□□ 1.37
KATNA1-201ENST00000335643 KIAA1107Q9UPP5 1409 aa23.62■■□□□ 1.37
KATNA1-201ENST00000335643 PLEKHH2Q8IVE3 1493 aa23.6■■□□□ 1.37
KATNA1-201ENST00000335643 PTPRMP28827 1452 aa23.59■■□□□ 1.37
KATNA1-201ENST00000335643 RIMS1Q86UR5 1692 aaKnown RBP23.58■■□□□ 1.37
KATNA1-201ENST00000335643 MBD5Q9P267 1494 aa23.58■■□□□ 1.37
KATNA1-201ENST00000335643 MYT1LQ9UL68 1186 aa23.58■■□□□ 1.37
KATNA1-201ENST00000335643 REREQ9P2R6 1566 aa23.57■■□□□ 1.36
KATNA1-201ENST00000335643 INO80Q9ULG1 1556 aaPredicted RBP23.57■■□□□ 1.36
KATNA1-201ENST00000335643 MLECQ14165 292 aa23.56■■□□□ 1.36
KATNA1-201ENST00000335643 CAMSAP2Q08AD1 1489 aa23.55■■□□□ 1.36
KATNA1-201ENST00000335643 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
KATNA1-201ENST00000335643 FER1L4A9Z1Z3 1794 aa23.53■■□□□ 1.36
KATNA1-201ENST00000335643 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.36
KATNA1-201ENST00000335643 AGLP35573 1532 aa23.48■■□□□ 1.35
KATNA1-201ENST00000335643 MYOM3Q5VTT5 1437 aa23.47■■□□□ 1.35
KATNA1-201ENST00000335643 PLXNC1O60486 1568 aa23.45■■□□□ 1.35
KATNA1-201ENST00000335643 APLP2Q06481 763 aa23.45■■□□□ 1.34
KATNA1-201ENST00000335643 CCDC141Q6ZP82 1450 aa23.45■■□□□ 1.34
KATNA1-201ENST00000335643 ARHGEF5Q12774 1597 aa23.43■■□□□ 1.34
KATNA1-201ENST00000335643 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
KATNA1-201ENST00000335643 MIA2Q96PC5 1412 aa23.41■■□□□ 1.34
KATNA1-201ENST00000335643 A2MP01023 1474 aa23.41■■□□□ 1.34
KATNA1-201ENST00000335643 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
KATNA1-201ENST00000335643 RTEL1-TNFRSF6BF6WH68 1400 aa23.4■■□□□ 1.34
KATNA1-201ENST00000335643 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
KATNA1-201ENST00000335643 CEBPAP49715 358 aaPredicted RBP23.34■■□□□ 1.33
KATNA1-201ENST00000335643 RSPH4AQ5TD94 716 aa23.33■■□□□ 1.33
KATNA1-201ENST00000335643 LMTK3Q96Q04 1460 aa23.33■■□□□ 1.33
KATNA1-201ENST00000335643 C3P01024 1663 aa23.33■■□□□ 1.33
KATNA1-201ENST00000335643 MAST1Q9Y2H9 1570 aa23.32■■□□□ 1.32
KATNA1-201ENST00000335643 FGD6Q6ZV73 1430 aa23.32■■□□□ 1.32
KATNA1-201ENST00000335643 CROCC2H7BZ55 1655 aa23.3■■□□□ 1.32
KATNA1-201ENST00000335643 TCOF1Q13428 1488 aaKnown RBP23.29■■□□□ 1.32
KATNA1-201ENST00000335643 DHX29Q7Z478 1369 aaKnown RBP23.29■■□□□ 1.32
KATNA1-201ENST00000335643 CLTCQ00610 1675 aaKnown RBP23.27■■□□□ 1.32
KATNA1-201ENST00000335643 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
KATNA1-201ENST00000335643 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
KATNA1-201ENST00000335643 ABCC5O15440 1437 aa23.26■■□□□ 1.31
KATNA1-201ENST00000335643 MROH2AA6NES4 1674 aa23.26■■□□□ 1.31
KATNA1-201ENST00000335643 DNMT1P26358 1616 aaKnown RBP23.25■■□□□ 1.31
KATNA1-201ENST00000335643 GGT6Q6P531 493 aa23.25■■□□□ 1.31
KATNA1-201ENST00000335643 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
KATNA1-201ENST00000335643 DAPK1P53355 1430 aa23.22■■□□□ 1.31
KATNA1-201ENST00000335643 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
KATNA1-201ENST00000335643 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
KATNA1-201ENST00000335643 PPARGC1BQ86YN6 1023 aaKnown RBP23.21■■□□□ 1.31
KATNA1-201ENST00000335643 ESF1Q9H501 851 aaKnown RBP23.21■■□□□ 1.31
KATNA1-201ENST00000335643 KIF3BO15066 747 aa23.19■■□□□ 1.3
KATNA1-201ENST00000335643 HSPA2P54652 639 aa23.19■■□□□ 1.3
KATNA1-201ENST00000335643 ZMYM3Q14202 1370 aa23.18■■□□□ 1.3
KATNA1-201ENST00000335643 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
KATNA1-201ENST00000335643 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
KATNA1-201ENST00000335643 MROH1Q8NDA8 1641 aa23.14■■□□□ 1.29
KATNA1-201ENST00000335643 SETD1BQ9UPS6 1966 aaKnown RBP23.14■■□□□ 1.29
KATNA1-201ENST00000335643 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms