RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 MAGI1Q96QZ7 1491 aaPredicted RBP28.58■■■□□ 2.17
SPNS1-203ENST00000334536 GRIN2AQ12879 1464 aa28.58■■■□□ 2.17
SPNS1-203ENST00000334536 CHIC2Q9UKJ5 165 aa28.58■■■□□ 2.17
SPNS1-203ENST00000334536 DENND4BO75064 1496 aaPredicted RBP28.56■■■□□ 2.16
SPNS1-203ENST00000334536 HIRIP3Q9BW71 556 aaPredicted RBP28.55■■■□□ 2.16
SPNS1-203ENST00000334536 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
SPNS1-203ENST00000334536 UBE2Q2Q8WVN8 375 aa28.54■■■□□ 2.16
SPNS1-203ENST00000334536 NUP153P49790 1475 aaKnown RBP28.54■■■□□ 2.16
SPNS1-203ENST00000334536 TRIM52Q96A61 297 aa28.53■■■□□ 2.16
SPNS1-203ENST00000334536 KDM6BO15054 1643 aa28.52■■■□□ 2.16
SPNS1-203ENST00000334536 CDK11AQ9UQ88 783 aaPredicted RBP28.52■■■□□ 2.16
SPNS1-203ENST00000334536 DAPK1P53355 1430 aa28.52■■■□□ 2.16
SPNS1-203ENST00000334536 DNMT1P26358 1616 aaKnown RBP28.5■■■□□ 2.15
SPNS1-203ENST00000334536 MPHOSPH9Q99550 1183 aa28.5■■■□□ 2.15
SPNS1-203ENST00000334536 SYNJ2O15056 1496 aa28.49■■■□□ 2.15
SPNS1-203ENST00000334536 ABCC5O15440 1437 aa28.46■■■□□ 2.15
SPNS1-203ENST00000334536 CHMP7Q8WUX9 453 aaPredicted RBP28.45■■■□□ 2.14
SPNS1-203ENST00000334536 ARID3CA6NKF2 412 aa28.42■■■□□ 2.14
SPNS1-203ENST00000334536 FBLN2P98095 1184 aa28.42■■■□□ 2.14
SPNS1-203ENST00000334536 TROQ12816 1431 aaPredicted RBP28.41■■■□□ 2.14
SPNS1-203ENST00000334536 ANKRD30BQ9BXX2 1392 aa28.37■■■□□ 2.13
SPNS1-203ENST00000334536 CEP170Q5SW79 1584 aa28.36■■■□□ 2.13
SPNS1-203ENST00000334536 HSPA5P11021 654 aaKnown RBP28.36■■■□□ 2.13
SPNS1-203ENST00000334536 EIF4G2P78344 907 aaKnown RBP eCLIP28.35■■■□□ 2.13
SPNS1-203ENST00000334536 RPRD2Q5VT52 1461 aaKnown RBP28.34■■■□□ 2.13
SPNS1-203ENST00000334536 ITSN2Q9NZM3 1697 aa28.34■■■□□ 2.13
SPNS1-203ENST00000334536 ADCY10Q96PN6 1610 aa28.34■■■□□ 2.13
SPNS1-203ENST00000334536 L3MBTL2Q969R5 705 aa28.32■■■□□ 2.12
SPNS1-203ENST00000334536 CARMIL2Q6F5E8 1435 aa28.32■■■□□ 2.12
SPNS1-203ENST00000334536 SALL2Q9Y467 1007 aaPredicted RBP28.31■■■□□ 2.12
SPNS1-203ENST00000334536 ZNF644Q9H582 1327 aaPredicted RBP28.3■■■□□ 2.12
SPNS1-203ENST00000334536 NUP160Q12769 1436 aa28.3■■■□□ 2.12
SPNS1-203ENST00000334536 PRG4Q92954 1404 aaPredicted RBP28.3■■■□□ 2.12
SPNS1-203ENST00000334536 WASHC2AQ641Q2 1341 aa28.29■■■□□ 2.12
SPNS1-203ENST00000334536 CAMSAP2Q08AD1 1489 aa28.29■■■□□ 2.12
SPNS1-203ENST00000334536 GPATCH8Q9UKJ3 1502 aaKnown RBP28.26■■■□□ 2.11
SPNS1-203ENST00000334536 ADGBQ8N7X0 1667 aa28.26■■■□□ 2.11
SPNS1-203ENST00000334536 ADGRL2O95490 1459 aa28.26■■■□□ 2.11
SPNS1-203ENST00000334536 TEX14Q8IWB6 1497 aa28.25■■■□□ 2.11
SPNS1-203ENST00000334536 CFDP1Q9UEE9 299 aaPredicted RBP28.25■■■□□ 2.11
SPNS1-203ENST00000334536 PLB1Q6P1J6 1458 aa28.25■■■□□ 2.11
SPNS1-203ENST00000334536 CHD1O14646 1710 aa28.23■■■□□ 2.11
SPNS1-203ENST00000334536 SLC4A1APQ9BWU0 796 aaKnown RBP28.23■■■□□ 2.11
SPNS1-203ENST00000334536 NCOA1Q15788 1441 aa28.22■■■□□ 2.11
SPNS1-203ENST00000334536 FOXD1Q16676 465 aa28.21■■■□□ 2.11
SPNS1-203ENST00000334536 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
SPNS1-203ENST00000334536 JPH4Q96JJ6 628 aa28.21■■■□□ 2.11
SPNS1-203ENST00000334536 PZPP20742 1482 aa28.2■■■□□ 2.1
SPNS1-203ENST00000334536 CROCC2H7BZ55 1655 aa28.19■■■□□ 2.1
SPNS1-203ENST00000334536 NOP58Q9Y2X3 529 aaKnown RBP28.18■■■□□ 2.1
SPNS1-203ENST00000334536 KIF14Q15058 1648 aa28.17■■■□□ 2.1
SPNS1-203ENST00000334536 CCDC7Q96M83 1385 aa28.16■■■□□ 2.1
SPNS1-203ENST00000334536 ABCA8O94911 1581 aa28.15■■■□□ 2.1
SPNS1-203ENST00000334536 ANKRD30AQ9BXX3 1397 aa28.15■■■□□ 2.1
SPNS1-203ENST00000334536 NBPF8Q3BBV2 869 aa28.13■■■□□ 2.09
SPNS1-203ENST00000334536 KIAA1107Q9UPP5 1409 aa28.12■■■□□ 2.09
SPNS1-203ENST00000334536 SPATA31E1Q6ZUB1 1445 aa28.11■■■□□ 2.09
SPNS1-203ENST00000334536 SHANK2Q9UPX8 1470 aa28.09■■■□□ 2.09
SPNS1-203ENST00000334536 PLEKHD1A6NEE1 506 aa28.09■■■□□ 2.09
SPNS1-203ENST00000334536 ABCC10Q5T3U5 1492 aa28.08■■■□□ 2.09
SPNS1-203ENST00000334536 POLR1AO95602 1720 aaPredicted RBP28.07■■■□□ 2.08
SPNS1-203ENST00000334536 MBD5Q9P267 1494 aa28.06■■■□□ 2.08
SPNS1-203ENST00000334536 ATP10BO94823 1461 aa28.05■■■□□ 2.08
SPNS1-203ENST00000334536 C11orf95C9JLR9 678 aaPredicted RBP28.04■■■□□ 2.08
SPNS1-203ENST00000334536 ZNF777Q9ULD5 760 aaPredicted RBP28.04■■■□□ 2.08
SPNS1-203ENST00000334536 CDC42BPAQ5VT25 1732 aa28.03■■■□□ 2.08
SPNS1-203ENST00000334536 ANKRD50Q9ULJ7 1429 aa28.03■■■□□ 2.08
SPNS1-203ENST00000334536 RTL5Q5HYW3 569 aaPredicted RBP28.02■■■□□ 2.08
SPNS1-203ENST00000334536 HNRNPUQ00839 825 aaKnown RBP eCLIP28.02■■■□□ 2.08
SPNS1-203ENST00000334536 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
SPNS1-203ENST00000334536 PPP4R2Q9NY27 417 aa28■■■□□ 2.07
SPNS1-203ENST00000334536 KIF7Q2M1P5 1343 aa27.97■■■□□ 2.07
SPNS1-203ENST00000334536 C9orf84Q5VXU9 1444 aa27.97■■■□□ 2.07
SPNS1-203ENST00000334536 KDM5DQ9BY66 1539 aa27.97■■■□□ 2.07
SPNS1-203ENST00000334536 PKD2Q13563 968 aa27.97■■■□□ 2.07
SPNS1-203ENST00000334536 ARHGEF5Q12774 1597 aa27.95■■■□□ 2.06
SPNS1-203ENST00000334536 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
SPNS1-203ENST00000334536 ARID4BQ4LE39 1312 aaPredicted RBP27.91■■■□□ 2.06
SPNS1-203ENST00000334536 CCDC136Q96JN2 1154 aa27.91■■■□□ 2.06
SPNS1-203ENST00000334536 TSPY4P0CV99 314 aa27.91■■■□□ 2.06
SPNS1-203ENST00000334536 TSPY10P0CW01 314 aa27.91■■■□□ 2.06
SPNS1-203ENST00000334536 NBR1Q14596 966 aa27.9■■■□□ 2.06
SPNS1-203ENST00000334536 SHROOM2Q13796 1616 aa27.9■■■□□ 2.06
SPNS1-203ENST00000334536 ARHGEF12Q9NZN5 1544 aa27.88■■■□□ 2.05
SPNS1-203ENST00000334536 PTPRGP23470 1445 aa27.88■■■□□ 2.05
SPNS1-203ENST00000334536 NUP155O75694 1391 aa27.88■■■□□ 2.05
SPNS1-203ENST00000334536 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
SPNS1-203ENST00000334536 USP47Q96K76 1375 aa27.85■■■□□ 2.05
SPNS1-203ENST00000334536 IL27Q8NEV9 243 aa27.85■■■□□ 2.05
SPNS1-203ENST00000334536 CCDC184Q52MB2 194 aa27.84■■■□□ 2.05
SPNS1-203ENST00000334536 RSPH4AQ5TD94 716 aa27.84■■■□□ 2.05
SPNS1-203ENST00000334536 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
SPNS1-203ENST00000334536 MRS2Q9HD23 443 aa27.84■■■□□ 2.05
SPNS1-203ENST00000334536 KDM5CP41229 1560 aa27.82■■■□□ 2.04
SPNS1-203ENST00000334536 KIF15Q9NS87 1388 aa27.82■■■□□ 2.04
SPNS1-203ENST00000334536 USP35Q9P2H5 1018 aa27.8■■■□□ 2.04
SPNS1-203ENST00000334536 CCDC141Q6ZP82 1450 aa27.8■■■□□ 2.04
SPNS1-203ENST00000334536 PREX2Q70Z35 1606 aa27.79■■■□□ 2.04
SPNS1-203ENST00000334536 ZBED9Q6R2W3 1325 aa27.79■■■□□ 2.04
SPNS1-203ENST00000334536 PAK3O75914 559 aaPredicted RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms