RNA–Protein interactions for RNA: ENST00000334478.8

PFDN5-202, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-202ENST00000334478 RAPGEF3O95398 923 aa24.12■■□□□ 1.45
PFDN5-202ENST00000334478 ARHGEF40Q8TER5 1519 aa24.1■■□□□ 1.45
PFDN5-202ENST00000334478 KDM4FA0A1W2PPD8 638 aa24.08■■□□□ 1.45
PFDN5-202ENST00000334478 EFCAB2Q5VUJ9 269 aa24.08■■□□□ 1.45
PFDN5-202ENST00000334478 EHBP1L1Q8N3D4 1523 aa24.07■■□□□ 1.44
PFDN5-202ENST00000334478 POGZQ7Z3K3 1410 aa24.07■■□□□ 1.44
PFDN5-202ENST00000334478 VPS8Q8N3P4 1428 aa24.06■■□□□ 1.44
PFDN5-202ENST00000334478 SCAPERQ9BY12 1400 aa24.06■■□□□ 1.44
PFDN5-202ENST00000334478 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
PFDN5-202ENST00000334478 MAGI2Q86UL8 1455 aa24.03■■□□□ 1.44
PFDN5-202ENST00000334478 ABCC1P33527 1531 aa24.02■■□□□ 1.44
PFDN5-202ENST00000334478 ZFYVE16Q7Z3T8 1539 aa24.02■■□□□ 1.44
PFDN5-202ENST00000334478 ZNF518AQ6AHZ1 1483 aa24.01■■□□□ 1.43
PFDN5-202ENST00000334478 ITSN2Q9NZM3 1697 aa24.01■■□□□ 1.43
PFDN5-202ENST00000334478 KDM5CP41229 1560 aa24■■□□□ 1.43
PFDN5-202ENST00000334478 TIAM1Q13009 1591 aa24■■□□□ 1.43
PFDN5-202ENST00000334478 GPATCH8Q9UKJ3 1502 aaKnown RBP23.97■■□□□ 1.43
PFDN5-202ENST00000334478 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
PFDN5-202ENST00000334478 BCORL1Q5H9F3 1711 aa23.95■■□□□ 1.42
PFDN5-202ENST00000334478 SAMD9LQ8IVG5 1584 aa23.95■■□□□ 1.42
PFDN5-202ENST00000334478 HECW2Q9P2P5 1572 aa23.95■■□□□ 1.42
PFDN5-202ENST00000334478 CCNB3Q8WWL7 1395 aa23.93■■□□□ 1.42
PFDN5-202ENST00000334478 YEATS2Q9ULM3 1422 aa23.93■■□□□ 1.42
PFDN5-202ENST00000334478 ADAMTSL3P82987 1691 aa23.92■■□□□ 1.42
PFDN5-202ENST00000334478 MAP3K1Q13233 1512 aa23.92■■□□□ 1.42
PFDN5-202ENST00000334478 ARHGEF12Q9NZN5 1544 aa23.89■■□□□ 1.42
PFDN5-202ENST00000334478 SIGLEC1Q9BZZ2 1709 aa23.89■■□□□ 1.41
PFDN5-202ENST00000334478 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.41
PFDN5-202ENST00000334478 PLEKHH2Q8IVE3 1493 aa23.88■■□□□ 1.41
PFDN5-202ENST00000334478 MLH3Q9UHC1 1453 aa23.87■■□□□ 1.41
PFDN5-202ENST00000334478 ATP10AO60312 1499 aa23.86■■□□□ 1.41
PFDN5-202ENST00000334478 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
PFDN5-202ENST00000334478 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
PFDN5-202ENST00000334478 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
PFDN5-202ENST00000334478 TRAPPC8Q9Y2L5 1435 aa23.85■■□□□ 1.41
PFDN5-202ENST00000334478 DIP2CQ9Y2E4 1556 aa23.85■■□□□ 1.41
PFDN5-202ENST00000334478 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
PFDN5-202ENST00000334478 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
PFDN5-202ENST00000334478 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
PFDN5-202ENST00000334478 REREQ9P2R6 1566 aa23.84■■□□□ 1.41
PFDN5-202ENST00000334478 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
PFDN5-202ENST00000334478 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
PFDN5-202ENST00000334478 MADDQ8WXG6 1647 aa23.84■■□□□ 1.41
PFDN5-202ENST00000334478 KIDINS220Q9ULH0 1771 aa23.83■■□□□ 1.4
PFDN5-202ENST00000334478 ZNF777Q9ULD5 760 aaPredicted RBP23.82■■□□□ 1.4
PFDN5-202ENST00000334478 FER1L4A9Z1Z3 1794 aa23.78■■□□□ 1.4
PFDN5-202ENST00000334478 INO80Q9ULG1 1556 aaPredicted RBP23.78■■□□□ 1.4
PFDN5-202ENST00000334478 RIMS1Q86UR5 1692 aaKnown RBP23.77■■□□□ 1.4
PFDN5-202ENST00000334478 PTPRMP28827 1452 aa23.75■■□□□ 1.39
PFDN5-202ENST00000334478 MYT1LQ9UL68 1186 aa23.75■■□□□ 1.39
PFDN5-202ENST00000334478 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
PFDN5-202ENST00000334478 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
PFDN5-202ENST00000334478 AGLP35573 1532 aa23.71■■□□□ 1.39
PFDN5-202ENST00000334478 HNRNPMP52272 730 aaKnown RBP eCLIP23.71■■□□□ 1.39
PFDN5-202ENST00000334478 MBD5Q9P267 1494 aa23.7■■□□□ 1.38
PFDN5-202ENST00000334478 APLP2Q06481 763 aa23.7■■□□□ 1.38
PFDN5-202ENST00000334478 SPAG9O60271 1321 aaKnown RBP23.69■■□□□ 1.38
PFDN5-202ENST00000334478 KANK4Q5T7N3 995 aaPredicted RBP23.69■■□□□ 1.38
PFDN5-202ENST00000334478 ZNF644Q9H582 1327 aaPredicted RBP23.68■■□□□ 1.38
PFDN5-202ENST00000334478 ADGBQ8N7X0 1667 aa23.68■■□□□ 1.38
PFDN5-202ENST00000334478 ARHGEF5Q12774 1597 aa23.67■■□□□ 1.38
PFDN5-202ENST00000334478 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
PFDN5-202ENST00000334478 MYOM3Q5VTT5 1437 aa23.66■■□□□ 1.38
PFDN5-202ENST00000334478 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
PFDN5-202ENST00000334478 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
PFDN5-202ENST00000334478 MIA2Q96PC5 1412 aa23.63■■□□□ 1.37
PFDN5-202ENST00000334478 MLECQ14165 292 aa23.62■■□□□ 1.37
PFDN5-202ENST00000334478 RSPH4AQ5TD94 716 aa23.6■■□□□ 1.37
PFDN5-202ENST00000334478 A2MP01023 1474 aa23.59■■□□□ 1.37
PFDN5-202ENST00000334478 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
PFDN5-202ENST00000334478 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
PFDN5-202ENST00000334478 MROH2AA6NES4 1674 aa23.53■■□□□ 1.36
PFDN5-202ENST00000334478 CROCC2H7BZ55 1655 aa23.53■■□□□ 1.36
PFDN5-202ENST00000334478 C3P01024 1663 aa23.52■■□□□ 1.36
PFDN5-202ENST00000334478 CNTLNQ9NXG0 1405 aa23.5■■□□□ 1.35
PFDN5-202ENST00000334478 PREX1Q8TCU6 1659 aa23.49■■□□□ 1.35
PFDN5-202ENST00000334478 FGD6Q6ZV73 1430 aa23.49■■□□□ 1.35
PFDN5-202ENST00000334478 LMTK3Q96Q04 1460 aa23.49■■□□□ 1.35
PFDN5-202ENST00000334478 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
PFDN5-202ENST00000334478 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
PFDN5-202ENST00000334478 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
PFDN5-202ENST00000334478 DNMT1P26358 1616 aaKnown RBP23.46■■□□□ 1.35
PFDN5-202ENST00000334478 DHX29Q7Z478 1369 aaKnown RBP23.46■■□□□ 1.35
PFDN5-202ENST00000334478 ESF1Q9H501 851 aaKnown RBP23.46■■□□□ 1.35
PFDN5-202ENST00000334478 CLTCQ00610 1675 aaKnown RBP23.45■■□□□ 1.34
PFDN5-202ENST00000334478 SHANK2Q9UPX8 1470 aa23.45■■□□□ 1.34
PFDN5-202ENST00000334478 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
PFDN5-202ENST00000334478 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
PFDN5-202ENST00000334478 FAM135AQ9P2D6 1515 aa23.42■■□□□ 1.34
PFDN5-202ENST00000334478 SETD1BQ9UPS6 1966 aaKnown RBP23.41■■□□□ 1.34
PFDN5-202ENST00000334478 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
PFDN5-202ENST00000334478 RNF17Q9BXT8 1623 aaKnown RBP23.38■■□□□ 1.33
PFDN5-202ENST00000334478 CEBPAP49715 358 aaPredicted RBP23.38■■□□□ 1.33
PFDN5-202ENST00000334478 DAPK1P53355 1430 aa23.38■■□□□ 1.33
PFDN5-202ENST00000334478 ABCC5O15440 1437 aa23.37■■□□□ 1.33
PFDN5-202ENST00000334478 GGT6Q6P531 493 aa23.36■■□□□ 1.33
PFDN5-202ENST00000334478 DUOX2Q9NRD8 1548 aa23.36■■□□□ 1.33
PFDN5-202ENST00000334478 KDM5DQ9BY66 1539 aa23.35■■□□□ 1.33
PFDN5-202ENST00000334478 NPATQ14207 1427 aa23.34■■□□□ 1.33
PFDN5-202ENST00000334478 UHRF1BP1Q6BDS2 1440 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms