RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 KTN1Q86UP2 1357 aaKnown RBP21.09■□□□□ 0.97
PDZD8-201ENST00000334464 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
PDZD8-201ENST00000334464 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.96
PDZD8-201ENST00000334464 DRC7Q8IY82 874 aa21.07■□□□□ 0.96
PDZD8-201ENST00000334464 GBP4Q96PP9 640 aa21.07■□□□□ 0.96
PDZD8-201ENST00000334464 GPATCH3Q96I76 525 aa21.05■□□□□ 0.96
PDZD8-201ENST00000334464 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
PDZD8-201ENST00000334464 CLSTN1O94985 981 aa21.04■□□□□ 0.96
PDZD8-201ENST00000334464 CCER2I3L3R5 266 aa21.02■□□□□ 0.96
PDZD8-201ENST00000334464 TPRNQ4KMQ1 711 aa21.02■□□□□ 0.95
PDZD8-201ENST00000334464 CARMIL2Q6F5E8 1435 aa21.01■□□□□ 0.95
PDZD8-201ENST00000334464 MORC1Q86VD1 984 aa21.01■□□□□ 0.95
PDZD8-201ENST00000334464 HDGFL2Q7Z4V5 671 aaPredicted RBP21■□□□□ 0.95
PDZD8-201ENST00000334464 RTN4Q9NQC3 1192 aaKnown RBP20.99■□□□□ 0.95
PDZD8-201ENST00000334464 TPM4P67936 248 aa20.99■□□□□ 0.95
PDZD8-201ENST00000334464 SRPK2P78362 688 aaKnown RBP20.99■□□□□ 0.95
PDZD8-201ENST00000334464 CC2D1BQ5T0F9 858 aaKnown RBP20.99■□□□□ 0.95
PDZD8-201ENST00000334464 TMX4Q9H1E5 349 aaPredicted RBP20.99■□□□□ 0.95
PDZD8-201ENST00000334464 CSPP1Q1MSJ5 1256 aa20.98■□□□□ 0.95
PDZD8-201ENST00000334464 NOC3LQ8WTT2 800 aaKnown RBP20.97■□□□□ 0.95
PDZD8-201ENST00000334464 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
PDZD8-201ENST00000334464 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
PDZD8-201ENST00000334464 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
PDZD8-201ENST00000334464 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
PDZD8-201ENST00000334464 PHLDB1Q86UU1 1377 aa20.94■□□□□ 0.94
PDZD8-201ENST00000334464 RALBP1Q15311 655 aa20.94■□□□□ 0.94
PDZD8-201ENST00000334464 DCAF11Q8TEB1 546 aa20.94■□□□□ 0.94
PDZD8-201ENST00000334464 PHF14O94880 888 aa20.92■□□□□ 0.94
PDZD8-201ENST00000334464 RWDD1Q9H446 243 aaPredicted RBP20.92■□□□□ 0.94
PDZD8-201ENST00000334464 HMMRO75330 724 aa20.9■□□□□ 0.94
PDZD8-201ENST00000334464 ROCK2O75116 1388 aaKnown RBP20.9■□□□□ 0.94
PDZD8-201ENST00000334464 CUX2O14529 1486 aa20.9■□□□□ 0.94
PDZD8-201ENST00000334464 ISY1Q9ULR0 285 aaKnown RBP20.89■□□□□ 0.93
PDZD8-201ENST00000334464 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
PDZD8-201ENST00000334464 KIF3AQ9Y496 699 aa20.88■□□□□ 0.93
PDZD8-201ENST00000334464 CHMP4CQ96CF2 233 aa20.88■□□□□ 0.93
PDZD8-201ENST00000334464 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
PDZD8-201ENST00000334464 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
PDZD8-201ENST00000334464 GOLGA6L1Q8N7Z2 621 aa20.86■□□□□ 0.93
PDZD8-201ENST00000334464 LMOD3Q0VAK6 560 aa20.85■□□□□ 0.93
PDZD8-201ENST00000334464 PMFBP1Q8TBY8 1022 aa20.84■□□□□ 0.93
PDZD8-201ENST00000334464 STK31Q9BXU1 1019 aa20.84■□□□□ 0.93
PDZD8-201ENST00000334464 CCDC18Q5T9S5 1454 aa20.83■□□□□ 0.93
PDZD8-201ENST00000334464 ANKRD30AQ9BXX3 1397 aa20.83■□□□□ 0.92
PDZD8-201ENST00000334464 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
PDZD8-201ENST00000334464 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
PDZD8-201ENST00000334464 TCERG1O14776 1098 aaKnown RBP20.81■□□□□ 0.92
PDZD8-201ENST00000334464 UACAQ9BZF9 1416 aa20.78■□□□□ 0.92
PDZD8-201ENST00000334464 KAT6BQ8WYB5 2073 aa20.78■□□□□ 0.92
PDZD8-201ENST00000334464 GORABQ5T7V8 394 aa20.78■□□□□ 0.92
PDZD8-201ENST00000334464 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.92
PDZD8-201ENST00000334464 B4GALNT3Q6L9W6 998 aa20.77■□□□□ 0.92
PDZD8-201ENST00000334464 ITPRIPQ8IWB1 547 aa20.77■□□□□ 0.92
PDZD8-201ENST00000334464 DEKP35659 375 aaKnown RBP20.76■□□□□ 0.91
PDZD8-201ENST00000334464 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
PDZD8-201ENST00000334464 RSPH4AQ5TD94 716 aa20.72■□□□□ 0.91
PDZD8-201ENST00000334464 U2AF1L5P0DN76 240 aaPredicted RBP20.72■□□□□ 0.91
PDZD8-201ENST00000334464 U2AF1Q01081 240 aaKnown RBP eCLIP20.72■□□□□ 0.91
PDZD8-201ENST00000334464 ST18O60284 1047 aa20.71■□□□□ 0.91
PDZD8-201ENST00000334464 A0A0U1RQG5 324 aaPredicted RBP20.71■□□□□ 0.91
PDZD8-201ENST00000334464 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
PDZD8-201ENST00000334464 TAF7LQ5H9L4 462 aa20.7■□□□□ 0.9
PDZD8-201ENST00000334464 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
PDZD8-201ENST00000334464 CEP89Q96ST8 783 aa20.7■□□□□ 0.9
PDZD8-201ENST00000334464 LRRFIP1Q32MZ4 808 aaKnown RBP20.7■□□□□ 0.9
PDZD8-201ENST00000334464 TPM3P06753 285 aa20.7■□□□□ 0.9
PDZD8-201ENST00000334464 CSB-PGBD3P0DP91 1061 aa20.7■□□□□ 0.9
PDZD8-201ENST00000334464 ATP6V1DQ9Y5K8 247 aa20.69■□□□□ 0.9
PDZD8-201ENST00000334464 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
PDZD8-201ENST00000334464 HSP90B1P14625 803 aaKnown RBP20.69■□□□□ 0.9
PDZD8-201ENST00000334464 RASSF8Q8NHQ8 419 aa20.68■□□□□ 0.9
PDZD8-201ENST00000334464 PKD2Q13563 968 aa20.67■□□□□ 0.9
PDZD8-201ENST00000334464 NUP155O75694 1391 aa20.67■□□□□ 0.9
PDZD8-201ENST00000334464 EID1Q9Y6B2 187 aa20.67■□□□□ 0.9
PDZD8-201ENST00000334464 PAK3O75914 559 aaPredicted RBP20.66■□□□□ 0.9
PDZD8-201ENST00000334464 EFCAB2Q5VUJ9 269 aa20.66■□□□□ 0.9
PDZD8-201ENST00000334464 SOX12O15370 315 aa20.66■□□□□ 0.9
PDZD8-201ENST00000334464 AMER1Q5JTC6 1135 aaPredicted RBP20.66■□□□□ 0.9
PDZD8-201ENST00000334464 DDX11L8A8MPP1 907 aa20.65■□□□□ 0.9
PDZD8-201ENST00000334464 NCBP3Q53F19 620 aaKnown RBP20.64■□□□□ 0.9
PDZD8-201ENST00000334464 GOLGA6L3A6NEY3 463 aa20.64■□□□□ 0.89
PDZD8-201ENST00000334464 TRIM6-TRIM34B2RNG4 842 aa20.64■□□□□ 0.89
PDZD8-201ENST00000334464 TSR1Q2NL82 804 aaKnown RBP20.63■□□□□ 0.89
PDZD8-201ENST00000334464 SMC4Q9NTJ3 1288 aa20.63■□□□□ 0.89
PDZD8-201ENST00000334464 TNNT3P45378 269 aaPredicted RBP20.63■□□□□ 0.89
PDZD8-201ENST00000334464 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
PDZD8-201ENST00000334464 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
PDZD8-201ENST00000334464 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
PDZD8-201ENST00000334464 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
PDZD8-201ENST00000334464 CCDC70Q6NSX1 233 aa20.61■□□□□ 0.89
PDZD8-201ENST00000334464 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
PDZD8-201ENST00000334464 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
PDZD8-201ENST00000334464 NLRP13Q86W25 1043 aa20.61■□□□□ 0.89
PDZD8-201ENST00000334464 G3V3G9 751 aa20.6■□□□□ 0.89
PDZD8-201ENST00000334464 DCAF8Q5TAQ9 597 aa20.6■□□□□ 0.89
PDZD8-201ENST00000334464 TPM1P09493 284 aa20.6■□□□□ 0.89
PDZD8-201ENST00000334464 SAFB2Q14151 953 aaKnown RBP eCLIP20.6■□□□□ 0.897e-7■□□□□ 8.7
PDZD8-201ENST00000334464 CENPJQ9HC77 1338 aaPredicted RBP20.6■□□□□ 0.89
PDZD8-201ENST00000334464 SENP3-EIF4A1A0A087X0R7 540 aa20.6■□□□□ 0.89
PDZD8-201ENST00000334464 APBB1O00213 710 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms