RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 DIP2BQ9P265 1576 aa14.47□□□□□ -0.09
C11orf54-201ENST00000331239 MAP3K4Q9Y6R4 1608 aa14.47□□□□□ -0.09
C11orf54-201ENST00000331239 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
C11orf54-201ENST00000331239 CDC42BPBQ9Y5S2 1711 aa14.45□□□□□ -0.1
C11orf54-201ENST00000331239 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
C11orf54-201ENST00000331239 KIAA1107Q9UPP5 1409 aa14.44□□□□□ -0.1
C11orf54-201ENST00000331239 PTPN23Q9H3S7 1636 aa14.44□□□□□ -0.1
C11orf54-201ENST00000331239 EFCAB2Q5VUJ9 269 aa14.43□□□□□ -0.1
C11orf54-201ENST00000331239 KCNH8Q96L42 1107 aa14.43□□□□□ -0.1
C11orf54-201ENST00000331239 CFDP1Q9UEE9 299 aaPredicted RBP14.43□□□□□ -0.1
C11orf54-201ENST00000331239 CD109Q6YHK3 1445 aa14.43□□□□□ -0.1
C11orf54-201ENST00000331239 NEO1Q92859 1461 aa14.43□□□□□ -0.1
C11orf54-201ENST00000331239 KIF13AQ9H1H9 1805 aa14.41□□□□□ -0.1
C11orf54-201ENST00000331239 TEX14Q8IWB6 1497 aa14.41□□□□□ -0.1
C11orf54-201ENST00000331239 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
C11orf54-201ENST00000331239 PPARGC1BQ86YN6 1023 aaKnown RBP14.4□□□□□ -0.1
C11orf54-201ENST00000331239 ARHGAP5Q13017 1502 aa14.4□□□□□ -0.1
C11orf54-201ENST00000331239 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
C11orf54-201ENST00000331239 FANCAO15360 1455 aa14.37□□□□□ -0.11
C11orf54-201ENST00000331239 FAM69CQ0P6D2 419 aa14.37□□□□□ -0.11
C11orf54-201ENST00000331239 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
C11orf54-201ENST00000331239 DNMT1P26358 1616 aaKnown RBP14.36□□□□□ -0.11
C11orf54-201ENST00000331239 SHANK2Q9UPX8 1470 aa14.36□□□□□ -0.11
C11orf54-201ENST00000331239 SAMD9LQ8IVG5 1584 aa14.36□□□□□ -0.11
C11orf54-201ENST00000331239 ABCC1P33527 1531 aa14.35□□□□□ -0.11
C11orf54-201ENST00000331239 AKNAQ7Z591 1439 aa14.34□□□□□ -0.11
C11orf54-201ENST00000331239 PPRC1Q5VV67 1664 aaKnown RBP14.33□□□□□ -0.11
C11orf54-201ENST00000331239 MAST1Q9Y2H9 1570 aa14.33□□□□□ -0.12
C11orf54-201ENST00000331239 MBD5Q9P267 1494 aa14.33□□□□□ -0.12
C11orf54-201ENST00000331239 CROCC2H7BZ55 1655 aa14.32□□□□□ -0.12
C11orf54-201ENST00000331239 ROCK1Q13464 1354 aa14.32□□□□□ -0.12
C11orf54-201ENST00000331239 CCDC141Q6ZP82 1450 aa14.31□□□□□ -0.12
C11orf54-201ENST00000331239 RTEL1-TNFRSF6BF6WH68 1400 aa14.3□□□□□ -0.12
C11orf54-201ENST00000331239 DAPK1P53355 1430 aa14.3□□□□□ -0.12
C11orf54-201ENST00000331239 ADGRL1O94910 1474 aa14.3□□□□□ -0.12
C11orf54-201ENST00000331239 ADGRL2O95490 1459 aa14.29□□□□□ -0.12
C11orf54-201ENST00000331239 ABCC5O15440 1437 aa14.29□□□□□ -0.12
C11orf54-201ENST00000331239 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
C11orf54-201ENST00000331239 ADGBQ8N7X0 1667 aa14.28□□□□□ -0.12
C11orf54-201ENST00000331239 ZNF518AQ6AHZ1 1483 aa14.28□□□□□ -0.12
C11orf54-201ENST00000331239 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
C11orf54-201ENST00000331239 DENND4BO75064 1496 aaPredicted RBP14.26□□□□□ -0.13
C11orf54-201ENST00000331239 SCAPERQ9BY12 1400 aa14.26□□□□□ -0.13
C11orf54-201ENST00000331239 KDM5CP41229 1560 aa14.26□□□□□ -0.13
C11orf54-201ENST00000331239 TSPY4P0CV99 314 aa14.26□□□□□ -0.13
C11orf54-201ENST00000331239 TSPY10P0CW01 314 aa14.26□□□□□ -0.13
C11orf54-201ENST00000331239 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
C11orf54-201ENST00000331239 ZNF777Q9ULD5 760 aaPredicted RBP14.25□□□□□ -0.13
C11orf54-201ENST00000331239 POGZQ7Z3K3 1410 aa14.25□□□□□ -0.13
C11orf54-201ENST00000331239 ARHGEF12Q9NZN5 1544 aa14.25□□□□□ -0.13
C11orf54-201ENST00000331239 ZNF644Q9H582 1327 aaPredicted RBP14.25□□□□□ -0.13
C11orf54-201ENST00000331239 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
C11orf54-201ENST00000331239 PLXNC1O60486 1568 aa14.25□□□□□ -0.13
C11orf54-201ENST00000331239 ZMYM4Q5VZL5 1548 aa14.24□□□□□ -0.13
C11orf54-201ENST00000331239 MLH3Q9UHC1 1453 aa14.24□□□□□ -0.13
C11orf54-201ENST00000331239 TSPOAP1O95153 1857 aa14.24□□□□□ -0.13
C11orf54-201ENST00000331239 ANKRD30AQ9BXX3 1397 aa14.23□□□□□ -0.13
C11orf54-201ENST00000331239 RICTORQ6R327 1708 aa14.23□□□□□ -0.13
C11orf54-201ENST00000331239 HFM1A2PYH4 1435 aa14.23□□□□□ -0.13
C11orf54-201ENST00000331239 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
C11orf54-201ENST00000331239 GCC2Q8IWJ2 1684 aa14.22□□□□□ -0.13
C11orf54-201ENST00000331239 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
C11orf54-201ENST00000331239 HNRNPMP52272 730 aaKnown RBP eCLIP14.21□□□□□ -0.13
C11orf54-201ENST00000331239 NCOA1Q15788 1441 aa14.21□□□□□ -0.13
C11orf54-201ENST00000331239 PTPRKQ15262 1439 aa14.2□□□□□ -0.14
C11orf54-201ENST00000331239 TRAPPC8Q9Y2L5 1435 aa14.2□□□□□ -0.14
C11orf54-201ENST00000331239 HECW2Q9P2P5 1572 aa14.19□□□□□ -0.14
C11orf54-201ENST00000331239 ZFYVE16Q7Z3T8 1539 aa14.19□□□□□ -0.14
C11orf54-201ENST00000331239 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
C11orf54-201ENST00000331239 ATP7AQ04656 1500 aa14.18□□□□□ -0.14
C11orf54-201ENST00000331239 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
C11orf54-201ENST00000331239 SETD5Q9C0A6 1442 aa14.18□□□□□ -0.14
C11orf54-201ENST00000331239 DUOX2Q9NRD8 1548 aa14.18□□□□□ -0.14
C11orf54-201ENST00000331239 FRMPD1Q5SYB0 1578 aa14.17□□□□□ -0.14
C11orf54-201ENST00000331239 REREQ9P2R6 1566 aa14.16□□□□□ -0.14
C11orf54-201ENST00000331239 NAIPQ13075 1403 aa14.16□□□□□ -0.14
C11orf54-201ENST00000331239 KIDINS220Q9ULH0 1771 aa14.16□□□□□ -0.14
C11orf54-201ENST00000331239 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
C11orf54-201ENST00000331239 BCORL1Q5H9F3 1711 aa14.15□□□□□ -0.14
C11orf54-201ENST00000331239 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
C11orf54-201ENST00000331239 AFAP1Q8N556 730 aa14.13□□□□□ -0.15
C11orf54-201ENST00000331239 KIF15Q9NS87 1388 aa14.12□□□□□ -0.15
C11orf54-201ENST00000331239 KDM6BO15054 1643 aa14.12□□□□□ -0.15
C11orf54-201ENST00000331239 DHX29Q7Z478 1369 aaKnown RBP14.11□□□□□ -0.15
C11orf54-201ENST00000331239 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
C11orf54-201ENST00000331239 ITGAEP38570 1179 aa14.1□□□□□ -0.15
C11orf54-201ENST00000331239 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
C11orf54-201ENST00000331239 ATP10AO60312 1499 aa14.09□□□□□ -0.15
C11orf54-201ENST00000331239 COL17A1Q9UMD9 1497 aaPredicted RBP14.09□□□□□ -0.15
C11orf54-201ENST00000331239 AGLP35573 1532 aa14.09□□□□□ -0.15
C11orf54-201ENST00000331239 ARHGEF40Q8TER5 1519 aa14.09□□□□□ -0.15
C11orf54-201ENST00000331239 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
C11orf54-201ENST00000331239 A2MP01023 1474 aa14.08□□□□□ -0.16
C11orf54-201ENST00000331239 CHIC2Q9UKJ5 165 aa14.08□□□□□ -0.16
C11orf54-201ENST00000331239 ABCA6Q8N139 1617 aa14.08□□□□□ -0.16
C11orf54-201ENST00000331239 RAPGEF3O95398 923 aa14.07□□□□□ -0.16
C11orf54-201ENST00000331239 KDM5DQ9BY66 1539 aa14.07□□□□□ -0.16
C11orf54-201ENST00000331239 RAB3GAP2Q9H2M9 1393 aa14.07□□□□□ -0.16
C11orf54-201ENST00000331239 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
C11orf54-201ENST00000331239 UNC13BO14795 1591 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms