RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 FAM13BQ9NYF5 915 aa20.76■□□□□ 0.91
SMAD3-201ENST00000327367 SYAP1Q96A49 352 aaPredicted RBP20.76■□□□□ 0.91
SMAD3-201ENST00000327367 RCAN3Q9UKA8 241 aa20.76■□□□□ 0.91
SMAD3-201ENST00000327367 GSE1Q14687 1217 aa20.76■□□□□ 0.91
SMAD3-201ENST00000327367 CREBRFQ8IUR6 639 aa20.75■□□□□ 0.91
SMAD3-201ENST00000327367 CHMP4BQ9H444 224 aaKnown RBP20.75■□□□□ 0.91
SMAD3-201ENST00000327367 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
SMAD3-201ENST00000327367 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
SMAD3-201ENST00000327367 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
SMAD3-201ENST00000327367 SETQ01105 290 aaPredicted RBP20.72■□□□□ 0.91
SMAD3-201ENST00000327367 CCER2I3L3R5 266 aa20.72■□□□□ 0.91
SMAD3-201ENST00000327367 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
SMAD3-201ENST00000327367 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
SMAD3-201ENST00000327367 GOLGA2Q08379 1002 aa20.7■□□□□ 0.9
SMAD3-201ENST00000327367 BCL11BQ9C0K0 894 aaPredicted RBP20.7■□□□□ 0.9
SMAD3-201ENST00000327367 FOXD4L6Q3SYB3 417 aaPredicted RBP20.69■□□□□ 0.9
SMAD3-201ENST00000327367 FOXD4L3Q6VB84 417 aaPredicted RBP20.69■□□□□ 0.9
SMAD3-201ENST00000327367 CCAR2Q8N163 923 aaKnown RBP20.69■□□□□ 0.9
SMAD3-201ENST00000327367 KIAA1211Q6ZU35 1233 aa20.69■□□□□ 0.9
SMAD3-201ENST00000327367 SOX12O15370 315 aa20.68■□□□□ 0.9
SMAD3-201ENST00000327367 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
SMAD3-201ENST00000327367 ZNF592Q92610 1267 aa20.67■□□□□ 0.9
SMAD3-201ENST00000327367 TPM4P67936 248 aa20.66■□□□□ 0.9
SMAD3-201ENST00000327367 NPHP1O15259 732 aa20.66■□□□□ 0.9
SMAD3-201ENST00000327367 HAP1P54257 671 aaPredicted RBP20.66■□□□□ 0.9
SMAD3-201ENST00000327367 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
SMAD3-201ENST00000327367 LMOD2Q6P5Q4 547 aa20.65■□□□□ 0.9
SMAD3-201ENST00000327367 PKNOX2Q96KN3 472 aa20.65■□□□□ 0.9
SMAD3-201ENST00000327367 KCNH8Q96L42 1107 aa20.65■□□□□ 0.9
SMAD3-201ENST00000327367 CALRP27797 417 aaKnown RBP20.63■□□□□ 0.89
SMAD3-201ENST00000327367 RWDD1Q9H446 243 aaPredicted RBP20.63■□□□□ 0.89
SMAD3-201ENST00000327367 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMAD3-201ENST00000327367 POGKQ9P215 609 aa20.59■□□□□ 0.89
SMAD3-201ENST00000327367 CLUAP1Q96AJ1 413 aa20.58■□□□□ 0.89
SMAD3-201ENST00000327367 TRIM6-TRIM34B2RNG4 842 aa20.58■□□□□ 0.89
SMAD3-201ENST00000327367 PRM3Q9NNZ6 103 aa20.58■□□□□ 0.88
SMAD3-201ENST00000327367 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.88
SMAD3-201ENST00000327367 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
SMAD3-201ENST00000327367 DDX11L8A8MPP1 907 aa20.56■□□□□ 0.88
SMAD3-201ENST00000327367 HTATSF1O43719 755 aaKnown RBP20.56■□□□□ 0.88
SMAD3-201ENST00000327367 USP35Q9P2H5 1018 aa20.56■□□□□ 0.88
SMAD3-201ENST00000327367 MORC1Q86VD1 984 aa20.56■□□□□ 0.88
SMAD3-201ENST00000327367 TMF1P82094 1093 aa20.55■□□□□ 0.88
SMAD3-201ENST00000327367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.55■□□□□ 0.88
SMAD3-201ENST00000327367 CFAP44Q96MT7 982 aa20.54■□□□□ 0.88
SMAD3-201ENST00000327367 PDE4AP27815 886 aa20.54■□□□□ 0.88
SMAD3-201ENST00000327367 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
SMAD3-201ENST00000327367 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
SMAD3-201ENST00000327367 TAF7LQ5H9L4 462 aa20.52■□□□□ 0.88
SMAD3-201ENST00000327367 PMFBP1Q8TBY8 1022 aa20.52■□□□□ 0.88
SMAD3-201ENST00000327367 PHF14O94880 888 aa20.52■□□□□ 0.88
SMAD3-201ENST00000327367 TPM3P06753 285 aa20.52■□□□□ 0.88
SMAD3-201ENST00000327367 FBXO3Q9UK99 471 aa20.51■□□□□ 0.87
SMAD3-201ENST00000327367 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
SMAD3-201ENST00000327367 PES1O00541 588 aaKnown RBP20.5■□□□□ 0.87
SMAD3-201ENST00000327367 PODXL2Q9NZ53 605 aa20.5■□□□□ 0.87
SMAD3-201ENST00000327367 IPO8O15397 1037 aaKnown RBP20.49■□□□□ 0.87
SMAD3-201ENST00000327367 PLIN1O60240 522 aa20.49■□□□□ 0.87
SMAD3-201ENST00000327367 PRKCSHP14314 528 aaPredicted RBP20.49■□□□□ 0.87
SMAD3-201ENST00000327367 FOXD1Q16676 465 aa20.49■□□□□ 0.87
SMAD3-201ENST00000327367 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
SMAD3-201ENST00000327367 CSPP1Q1MSJ5 1256 aa20.48■□□□□ 0.87
SMAD3-201ENST00000327367 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
SMAD3-201ENST00000327367 IL27Q8NEV9 243 aa20.47■□□□□ 0.87
SMAD3-201ENST00000327367 RASSF8Q8NHQ8 419 aa20.47■□□□□ 0.87
SMAD3-201ENST00000327367 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
SMAD3-201ENST00000327367 APPP05067 770 aa20.46■□□□□ 0.87
SMAD3-201ENST00000327367 R3HCC1Q9Y3T6 440 aaKnown RBP20.45■□□□□ 0.86
SMAD3-201ENST00000327367 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
SMAD3-201ENST00000327367 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
SMAD3-201ENST00000327367 CFDP1Q9UEE9 299 aaPredicted RBP20.45■□□□□ 0.86
SMAD3-201ENST00000327367 FAM43AQ8N2R8 423 aa20.45■□□□□ 0.86
SMAD3-201ENST00000327367 CHMP3Q9Y3E7 222 aa20.44■□□□□ 0.86
SMAD3-201ENST00000327367 SRPK2P78362 688 aaKnown RBP20.42■□□□□ 0.86
SMAD3-201ENST00000327367 RBM10P98175 930 aaKnown RBP20.42■□□□□ 0.86
SMAD3-201ENST00000327367 BRPF3Q9ULD4 1205 aa20.42■□□□□ 0.86
SMAD3-201ENST00000327367 ST18O60284 1047 aa20.42■□□□□ 0.86
SMAD3-201ENST00000327367 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
SMAD3-201ENST00000327367 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMAD3-201ENST00000327367 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
SMAD3-201ENST00000327367 GOLGA6L19H0YKK7 550 aa20.42■□□□□ 0.86
SMAD3-201ENST00000327367 EXOC6Q8TAG9 804 aa20.42■□□□□ 0.86
SMAD3-201ENST00000327367 TEX35Q5T0J7 233 aa20.41■□□□□ 0.86
SMAD3-201ENST00000327367 GPS2Q13227 327 aa20.41■□□□□ 0.86
SMAD3-201ENST00000327367 FAM161AQ3B820 660 aa20.41■□□□□ 0.86
SMAD3-201ENST00000327367 SF3A1Q15459 793 aaKnown RBP20.4■□□□□ 0.86
SMAD3-201ENST00000327367 FBXW7Q969H0 707 aa20.39■□□□□ 0.86
SMAD3-201ENST00000327367 FANCIQ9NVI1 1328 aa20.39■□□□□ 0.85
SMAD3-201ENST00000327367 MAPK8IP2Q13387 824 aaPredicted RBP20.39■□□□□ 0.85
SMAD3-201ENST00000327367 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.39■□□□□ 0.85
SMAD3-201ENST00000327367 KIF16BQ96L93 1317 aa20.39■□□□□ 0.85
SMAD3-201ENST00000327367 SLC4A10Q6U841 1118 aa20.39■□□□□ 0.85
SMAD3-201ENST00000327367 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
SMAD3-201ENST00000327367 BECN2A8MW95 431 aa20.38■□□□□ 0.85
SMAD3-201ENST00000327367 TPD52L1Q16890 204 aaPredicted RBP20.37■□□□□ 0.85
SMAD3-201ENST00000327367 SKOR2Q2VWA4 1001 aaPredicted RBP20.37■□□□□ 0.85
SMAD3-201ENST00000327367 PLEKHD1A6NEE1 506 aa20.36■□□□□ 0.85
SMAD3-201ENST00000327367 WWC1Q8IX03 1113 aa20.36■□□□□ 0.85
SMAD3-201ENST00000327367 HOMER1Q86YM7 354 aa20.35■□□□□ 0.85
SMAD3-201ENST00000327367 H3BQV1 296 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms