RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 CFAP74Q9C0B2 1584 aa13.29□□□□□ -0.28
CCNC-201ENST00000326298 ZMYM4Q5VZL5 1548 aa13.29□□□□□ -0.28
CCNC-201ENST00000326298 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
CCNC-201ENST00000326298 MYO5CQ9NQX4 1742 aa13.28□□□□□ -0.28
CCNC-201ENST00000326298 CLIP1P30622 1438 aa13.28□□□□□ -0.28
CCNC-201ENST00000326298 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
CCNC-201ENST00000326298 MLECQ14165 292 aa13.27□□□□□ -0.28
CCNC-201ENST00000326298 EFCAB2Q5VUJ9 269 aa13.27□□□□□ -0.28
CCNC-201ENST00000326298 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.28
CCNC-201ENST00000326298 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
CCNC-201ENST00000326298 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
CCNC-201ENST00000326298 ARHGAP5Q13017 1502 aa13.26□□□□□ -0.29
CCNC-201ENST00000326298 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
CCNC-201ENST00000326298 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
CCNC-201ENST00000326298 ILDR1Q86SU0 546 aaPredicted RBP13.23□□□□□ -0.29
CCNC-201ENST00000326298 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
CCNC-201ENST00000326298 MAGI2Q86UL8 1455 aa13.22□□□□□ -0.29
CCNC-201ENST00000326298 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
CCNC-201ENST00000326298 CCDC18Q5T9S5 1454 aa13.22□□□□□ -0.29
CCNC-201ENST00000326298 PREX2Q70Z35 1606 aa13.21□□□□□ -0.3
CCNC-201ENST00000326298 KDM5CP41229 1560 aa13.2□□□□□ -0.3
CCNC-201ENST00000326298 ATP10AO60312 1499 aa13.2□□□□□ -0.3
CCNC-201ENST00000326298 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
CCNC-201ENST00000326298 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
CCNC-201ENST00000326298 ZNF518AQ6AHZ1 1483 aa13.2□□□□□ -0.3
CCNC-201ENST00000326298 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
CCNC-201ENST00000326298 HSPA2P54652 639 aa13.19□□□□□ -0.3
CCNC-201ENST00000326298 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
CCNC-201ENST00000326298 ABCC1P33527 1531 aa13.18□□□□□ -0.3
CCNC-201ENST00000326298 DIP2CQ9Y2E4 1556 aa13.17□□□□□ -0.3
CCNC-201ENST00000326298 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
CCNC-201ENST00000326298 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
CCNC-201ENST00000326298 GPATCH8Q9UKJ3 1502 aaKnown RBP13.17□□□□□ -0.3
CCNC-201ENST00000326298 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
CCNC-201ENST00000326298 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
CCNC-201ENST00000326298 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
CCNC-201ENST00000326298 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
CCNC-201ENST00000326298 FER1L4A9Z1Z3 1794 aa13.15□□□□□ -0.3
CCNC-201ENST00000326298 HNRNPMP52272 730 aaKnown RBP eCLIP13.15□□□□□ -0.38e-10■■■■□ 20.8
CCNC-201ENST00000326298 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.3
CCNC-201ENST00000326298 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
CCNC-201ENST00000326298 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
CCNC-201ENST00000326298 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
CCNC-201ENST00000326298 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
CCNC-201ENST00000326298 MTUS2Q5JR59 1369 aa13.1□□□□□ -0.31
CCNC-201ENST00000326298 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
CCNC-201ENST00000326298 CCNB3Q8WWL7 1395 aa13.09□□□□□ -0.31
CCNC-201ENST00000326298 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
CCNC-201ENST00000326298 REREQ9P2R6 1566 aa13.08□□□□□ -0.32
CCNC-201ENST00000326298 SPAG9O60271 1321 aaKnown RBP13.06□□□□□ -0.32
CCNC-201ENST00000326298 AGLP35573 1532 aa13.06□□□□□ -0.32
CCNC-201ENST00000326298 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
CCNC-201ENST00000326298 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
CCNC-201ENST00000326298 KIAA1107Q9UPP5 1409 aa13.04□□□□□ -0.32
CCNC-201ENST00000326298 C3P01024 1663 aa13.04□□□□□ -0.32
CCNC-201ENST00000326298 ATP7AQ04656 1500 aa13.04□□□□□ -0.32
CCNC-201ENST00000326298 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
CCNC-201ENST00000326298 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
CCNC-201ENST00000326298 NCOA2Q15596 1464 aa13.02□□□□□ -0.32
CCNC-201ENST00000326298 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
CCNC-201ENST00000326298 PREX1Q8TCU6 1659 aa13.01□□□□□ -0.33
CCNC-201ENST00000326298 PLXNC1O60486 1568 aa13□□□□□ -0.33
CCNC-201ENST00000326298 STRCQ7RTU9 1775 aa12.99□□□□□ -0.33
CCNC-201ENST00000326298 A2MP01023 1474 aa12.99□□□□□ -0.33
CCNC-201ENST00000326298 VPS8Q8N3P4 1428 aa12.99□□□□□ -0.33
CCNC-201ENST00000326298 PLEKHH2Q8IVE3 1493 aa12.99□□□□□ -0.33
CCNC-201ENST00000326298 GGT6Q6P531 493 aa12.98□□□□□ -0.33
CCNC-201ENST00000326298 FBXO41Q8TF61 875 aa12.97□□□□□ -0.33
CCNC-201ENST00000326298 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
CCNC-201ENST00000326298 UHRF1BP1Q6BDS2 1440 aa12.97□□□□□ -0.33
CCNC-201ENST00000326298 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
CCNC-201ENST00000326298 LRRC9Q6ZRR7 1453 aa12.97□□□□□ -0.33
CCNC-201ENST00000326298 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.33
CCNC-201ENST00000326298 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
CCNC-201ENST00000326298 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
CCNC-201ENST00000326298 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
CCNC-201ENST00000326298 CNTLNQ9NXG0 1405 aa12.93□□□□□ -0.34
CCNC-201ENST00000326298 CCDC141Q6ZP82 1450 aa12.92□□□□□ -0.34
CCNC-201ENST00000326298 DHX29Q7Z478 1369 aaKnown RBP12.92□□□□□ -0.34
CCNC-201ENST00000326298 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
CCNC-201ENST00000326298 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
CCNC-201ENST00000326298 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
CCNC-201ENST00000326298 PTPRKQ15262 1439 aa12.91□□□□□ -0.34
CCNC-201ENST00000326298 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
CCNC-201ENST00000326298 KIF3BO15066 747 aa12.9□□□□□ -0.34
CCNC-201ENST00000326298 NPATQ14207 1427 aa12.88□□□□□ -0.35
CCNC-201ENST00000326298 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
CCNC-201ENST00000326298 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
CCNC-201ENST00000326298 CAMSAP1Q5T5Y3 1602 aa12.88□□□□□ -0.35
CCNC-201ENST00000326298 ARHGEF5Q12774 1597 aa12.87□□□□□ -0.35
CCNC-201ENST00000326298 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
CCNC-201ENST00000326298 MYO3AQ8NEV4 1616 aa12.86□□□□□ -0.35
CCNC-201ENST00000326298 MYOM3Q5VTT5 1437 aa12.86□□□□□ -0.35
CCNC-201ENST00000326298 CEP170BQ9Y4F5 1589 aaPredicted RBP12.84□□□□□ -0.35
CCNC-201ENST00000326298 PTPRTO14522 1441 aa12.84□□□□□ -0.35
CCNC-201ENST00000326298 LTBP4Q8N2S1 1624 aa12.84□□□□□ -0.35
CCNC-201ENST00000326298 TSPY4P0CV99 314 aa12.84□□□□□ -0.35
CCNC-201ENST00000326298 TSPY10P0CW01 314 aa12.84□□□□□ -0.35
CCNC-201ENST00000326298 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
CCNC-201ENST00000326298 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms