RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 KIF7Q2M1P5 1343 aa19.93■□□□□ 0.78
CUL1-201ENST00000325222 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
CUL1-201ENST00000325222 SPATA31E1Q6ZUB1 1445 aa19.91■□□□□ 0.78
CUL1-201ENST00000325222 AKNAQ7Z591 1439 aa19.91■□□□□ 0.78
CUL1-201ENST00000325222 CCDC136Q96JN2 1154 aa19.91■□□□□ 0.78
CUL1-201ENST00000325222 SALL2Q9Y467 1007 aaPredicted RBP19.89■□□□□ 0.77
CUL1-201ENST00000325222 ANKRD30BQ9BXX2 1392 aa19.89■□□□□ 0.77
CUL1-201ENST00000325222 TEX14Q8IWB6 1497 aa19.88■□□□□ 0.77
CUL1-201ENST00000325222 NOP58Q9Y2X3 529 aaKnown RBP19.87■□□□□ 0.77
CUL1-201ENST00000325222 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
CUL1-201ENST00000325222 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
CUL1-201ENST00000325222 RPRD2Q5VT52 1461 aaKnown RBP19.85■□□□□ 0.77
CUL1-201ENST00000325222 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
CUL1-201ENST00000325222 CNGB1Q14028 1251 aaPredicted RBP19.84■□□□□ 0.77
CUL1-201ENST00000325222 NBR1Q14596 966 aa19.84■□□□□ 0.77
CUL1-201ENST00000325222 SMG6Q86US8 1419 aaKnown RBP19.84■□□□□ 0.77
CUL1-201ENST00000325222 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
CUL1-201ENST00000325222 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.77
CUL1-201ENST00000325222 GAPVD1Q14C86 1478 aa19.82■□□□□ 0.76
CUL1-201ENST00000325222 RNF123Q5XPI4 1314 aa19.82■□□□□ 0.76
CUL1-201ENST00000325222 MYT1LQ9UL68 1186 aa19.82■□□□□ 0.76
CUL1-201ENST00000325222 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
CUL1-201ENST00000325222 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
CUL1-201ENST00000325222 LAMC3Q9Y6N6 1575 aa19.79■□□□□ 0.76
CUL1-201ENST00000325222 NUDCQ9Y266 331 aa19.79■□□□□ 0.76
CUL1-201ENST00000325222 MIA2Q96PC5 1412 aa19.78■□□□□ 0.76
CUL1-201ENST00000325222 POLR1AO95602 1720 aaPredicted RBP19.78■□□□□ 0.76
CUL1-201ENST00000325222 ZNF644Q9H582 1327 aaPredicted RBP19.76■□□□□ 0.75
CUL1-201ENST00000325222 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
CUL1-201ENST00000325222 BCORL1Q5H9F3 1711 aa19.75■□□□□ 0.75
CUL1-201ENST00000325222 RTN4Q9NQC3 1192 aaKnown RBP19.74■□□□□ 0.75
CUL1-201ENST00000325222 DAPK1P53355 1430 aa19.74■□□□□ 0.75
CUL1-201ENST00000325222 ABCC5O15440 1437 aa19.74■□□□□ 0.75
CUL1-201ENST00000325222 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
CUL1-201ENST00000325222 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.72■□□□□ 0.75
CUL1-201ENST00000325222 IPO9Q96P70 1041 aaKnown RBP19.72■□□□□ 0.75
CUL1-201ENST00000325222 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
CUL1-201ENST00000325222 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
CUL1-201ENST00000325222 PNISRQ8TF01 805 aaKnown RBP19.69■□□□□ 0.74
CUL1-201ENST00000325222 WDR62O43379 1518 aa19.68■□□□□ 0.74
CUL1-201ENST00000325222 PZPP20742 1482 aa19.68■□□□□ 0.74
CUL1-201ENST00000325222 MBD5Q9P267 1494 aa19.68■□□□□ 0.74
CUL1-201ENST00000325222 USP47Q96K76 1375 aa19.67■□□□□ 0.74
CUL1-201ENST00000325222 DNMT1P26358 1616 aaKnown RBP19.66■□□□□ 0.74
CUL1-201ENST00000325222 ANP32AP39687 249 aaKnown RBP19.65■□□□□ 0.74
CUL1-201ENST00000325222 ZNF326Q5BKZ1 582 aaKnown RBP19.65■□□□□ 0.74
CUL1-201ENST00000325222 IQGAP2Q13576 1575 aa19.62■□□□□ 0.73
CUL1-201ENST00000325222 ZBTB47Q9UFB7 747 aaPredicted RBP19.62■□□□□ 0.73
CUL1-201ENST00000325222 IL27Q8NEV9 243 aa19.6■□□□□ 0.73
CUL1-201ENST00000325222 KDM5CP41229 1560 aa19.6■□□□□ 0.73
CUL1-201ENST00000325222 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
CUL1-201ENST00000325222 EXOC6Q8TAG9 804 aa19.57■□□□□ 0.72
CUL1-201ENST00000325222 TMC1Q8TDI8 760 aa19.57■□□□□ 0.72
CUL1-201ENST00000325222 LRPPRCP42704 1394 aaKnown RBP19.57■□□□□ 0.72
CUL1-201ENST00000325222 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
CUL1-201ENST00000325222 PKD2Q13563 968 aa19.54■□□□□ 0.72
CUL1-201ENST00000325222 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
CUL1-201ENST00000325222 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
CUL1-201ENST00000325222 KIF14Q15058 1648 aa19.54■□□□□ 0.72
CUL1-201ENST00000325222 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
CUL1-201ENST00000325222 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
CUL1-201ENST00000325222 ARID4BQ4LE39 1312 aaPredicted RBP19.52■□□□□ 0.72
CUL1-201ENST00000325222 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
CUL1-201ENST00000325222 PBRM1Q86U86 1689 aa19.51■□□□□ 0.71
CUL1-201ENST00000325222 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
CUL1-201ENST00000325222 CAMSAP2Q08AD1 1489 aa19.49■□□□□ 0.71
CUL1-201ENST00000325222 KIF15Q9NS87 1388 aa19.49■□□□□ 0.71
CUL1-201ENST00000325222 UBE2Q2Q8WVN8 375 aa19.48■□□□□ 0.71
CUL1-201ENST00000325222 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
CUL1-201ENST00000325222 PDE4AP27815 886 aa19.48■□□□□ 0.71
CUL1-201ENST00000325222 ST20-MTHFSA0A0A6YYL1 179 aa19.48■□□□□ 0.71
CUL1-201ENST00000325222 UHRF1BP1Q6BDS2 1440 aa19.47■□□□□ 0.71
CUL1-201ENST00000325222 RALGAPBQ86X10 1494 aa19.47■□□□□ 0.71
CUL1-201ENST00000325222 DISP1Q96F81 1524 aa19.47■□□□□ 0.71
CUL1-201ENST00000325222 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
CUL1-201ENST00000325222 LAS1LQ9Y4W2 734 aaKnown RBP19.47■□□□□ 0.71
CUL1-201ENST00000325222 MYBBP1AQ9BQG0 1328 aaKnown RBP19.47■□□□□ 0.71
CUL1-201ENST00000325222 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
CUL1-201ENST00000325222 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
CUL1-201ENST00000325222 SKAP1Q86WV1 359 aa19.46■□□□□ 0.71
CUL1-201ENST00000325222 RCAN3Q9UKA8 241 aa19.46■□□□□ 0.71
CUL1-201ENST00000325222 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.71
CUL1-201ENST00000325222 EIF5BO60841 1220 aaKnown RBP19.46■□□□□ 0.71
CUL1-201ENST00000325222 TCERG1O14776 1098 aaKnown RBP19.45■□□□□ 0.7
CUL1-201ENST00000325222 BACH2Q9BYV9 841 aa19.45■□□□□ 0.7
CUL1-201ENST00000325222 CFDP1Q9UEE9 299 aaPredicted RBP19.44■□□□□ 0.7
CUL1-201ENST00000325222 ZNF777Q9ULD5 760 aaPredicted RBP19.44■□□□□ 0.7
CUL1-201ENST00000325222 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
CUL1-201ENST00000325222 KDM2AQ9Y2K7 1162 aa19.43■□□□□ 0.7
CUL1-201ENST00000325222 KIAA0556O60303 1618 aa19.43■□□□□ 0.7
CUL1-201ENST00000325222 GPATCH8Q9UKJ3 1502 aaKnown RBP19.42■□□□□ 0.7
CUL1-201ENST00000325222 ADGRL2O95490 1459 aa19.42■□□□□ 0.7
CUL1-201ENST00000325222 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
CUL1-201ENST00000325222 RAPGEF6Q8TEU7 1601 aa19.41■□□□□ 0.7
CUL1-201ENST00000325222 RALBP1Q15311 655 aa19.4■□□□□ 0.7
CUL1-201ENST00000325222 PLIN1O60240 522 aa19.4■□□□□ 0.7
CUL1-201ENST00000325222 KIAA0586Q9BVV6 1533 aa19.4■□□□□ 0.7
CUL1-201ENST00000325222 E9PCH4 1651 aa19.39■□□□□ 0.7
CUL1-201ENST00000325222 NEFMP07197 916 aa19.39■□□□□ 0.69
CUL1-201ENST00000325222 TROQ12816 1431 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms