RNA–Protein interactions for RNA: ENST00000324849.8

VPS37A-201, Transcript of VPS37A, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37A, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-201ENST00000324849 CHMP4AQ9BY43 222 aa22.43■■□□□ 1.18
VPS37A-201ENST00000324849 TPRNQ4KMQ1 711 aa22.43■■□□□ 1.18
VPS37A-201ENST00000324849 EID1Q9Y6B2 187 aa22.41■■□□□ 1.18
VPS37A-201ENST00000324849 KIF3BO15066 747 aa22.41■■□□□ 1.18
VPS37A-201ENST00000324849 CALD1Q05682 793 aaKnown RBP22.4■■□□□ 1.18
VPS37A-201ENST00000324849 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
VPS37A-201ENST00000324849 NUP155O75694 1391 aa22.39■■□□□ 1.17
VPS37A-201ENST00000324849 ANKRD30AQ9BXX3 1397 aa22.38■■□□□ 1.17
VPS37A-201ENST00000324849 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
VPS37A-201ENST00000324849 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
VPS37A-201ENST00000324849 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
VPS37A-201ENST00000324849 SETD5Q9C0A6 1442 aa22.36■■□□□ 1.17
VPS37A-201ENST00000324849 HSP90AB1P08238 724 aaKnown RBP22.36■■□□□ 1.17
VPS37A-201ENST00000324849 CFAP44Q96MT7 982 aa22.36■■□□□ 1.17
VPS37A-201ENST00000324849 U2AF1L5P0DN76 240 aaPredicted RBP22.35■■□□□ 1.17
VPS37A-201ENST00000324849 U2AF1Q01081 240 aaKnown RBP eCLIP22.35■■□□□ 1.17
VPS37A-201ENST00000324849 MCCP23508 829 aa22.34■■□□□ 1.17
VPS37A-201ENST00000324849 GOLGA6L4A6NEF3 574 aa22.34■■□□□ 1.17
VPS37A-201ENST00000324849 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
VPS37A-201ENST00000324849 KTN1Q86UP2 1357 aaKnown RBP22.33■■□□□ 1.16
VPS37A-201ENST00000324849 CCDC9Q9Y3X0 531 aaKnown RBP22.33■■□□□ 1.16
VPS37A-201ENST00000324849 ISY1Q9ULR0 285 aaKnown RBP22.32■■□□□ 1.16
VPS37A-201ENST00000324849 HSPA5P11021 654 aaKnown RBP22.32■■□□□ 1.16
VPS37A-201ENST00000324849 SPAG9O60271 1321 aaKnown RBP22.32■■□□□ 1.16
VPS37A-201ENST00000324849 NRDCO43847 1150 aa22.31■■□□□ 1.16
VPS37A-201ENST00000324849 TMX4Q9H1E5 349 aaPredicted RBP22.31■■□□□ 1.16
VPS37A-201ENST00000324849 WASHC2CQ9Y4E1 1318 aa22.31■■□□□ 1.16
VPS37A-201ENST00000324849 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
VPS37A-201ENST00000324849 PLCB2Q00722 1185 aa22.3■■□□□ 1.16
VPS37A-201ENST00000324849 DNTTIP2Q5QJE6 756 aaKnown RBP22.3■■□□□ 1.16
VPS37A-201ENST00000324849 VPS8Q8N3P4 1428 aa22.3■■□□□ 1.16
VPS37A-201ENST00000324849 MPHOSPH9Q99550 1183 aa22.3■■□□□ 1.16
VPS37A-201ENST00000324849 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
VPS37A-201ENST00000324849 FOXD1Q16676 465 aa22.29■■□□□ 1.16
VPS37A-201ENST00000324849 GOLGA6L6A8MZA4 724 aa22.28■■□□□ 1.16
VPS37A-201ENST00000324849 NGDNQ8NEJ9 315 aaKnown RBP22.28■■□□□ 1.16
VPS37A-201ENST00000324849 ROCK2O75116 1388 aaKnown RBP22.27■■□□□ 1.16
VPS37A-201ENST00000324849 HDAC5Q9UQL6 1122 aa22.26■■□□□ 1.15
VPS37A-201ENST00000324849 EIF3AQ14152 1382 aaKnown RBP22.26■■□□□ 1.15
VPS37A-201ENST00000324849 JPH4Q96JJ6 628 aa22.25■■□□□ 1.15
VPS37A-201ENST00000324849 CCER2I3L3R5 266 aa22.25■■□□□ 1.15
VPS37A-201ENST00000324849 STK31Q9BXU1 1019 aa22.25■■□□□ 1.15
VPS37A-201ENST00000324849 KIAA1211Q6ZU35 1233 aa22.24■■□□□ 1.15
VPS37A-201ENST00000324849 HSCBQ8IWL3 235 aa22.24■■□□□ 1.15
VPS37A-201ENST00000324849 KANK4Q5T7N3 995 aaPredicted RBP22.24■■□□□ 1.15
VPS37A-201ENST00000324849 HNRNPMP52272 730 aaKnown RBP eCLIP22.23■■□□□ 1.156e-7■■■■■ 30.1
VPS37A-201ENST00000324849 RALBP1Q15311 655 aa22.22■■□□□ 1.15
VPS37A-201ENST00000324849 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
VPS37A-201ENST00000324849 B4GALNT3Q6L9W6 998 aa22.2■■□□□ 1.14
VPS37A-201ENST00000324849 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
VPS37A-201ENST00000324849 APBB1O00213 710 aa22.2■■□□□ 1.14
VPS37A-201ENST00000324849 AMPHP49418 695 aa22.17■■□□□ 1.14
VPS37A-201ENST00000324849 GORABQ5T7V8 394 aa22.17■■□□□ 1.14
VPS37A-201ENST00000324849 GNL2Q13823 731 aaKnown RBP22.16■■□□□ 1.14
VPS37A-201ENST00000324849 ERICH6BQ5W0A0 696 aa22.16■■□□□ 1.14
VPS37A-201ENST00000324849 TAF7LQ5H9L4 462 aa22.15■■□□□ 1.14
VPS37A-201ENST00000324849 CLSTN1O94985 981 aa22.14■■□□□ 1.13
VPS37A-201ENST00000324849 RWDD1Q9H446 243 aaPredicted RBP22.13■■□□□ 1.13
VPS37A-201ENST00000324849 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
VPS37A-201ENST00000324849 ITPRIPQ8IWB1 547 aa22.12■■□□□ 1.13
VPS37A-201ENST00000324849 NUTM2DQ5VT03 806 aaPredicted RBP22.11■■□□□ 1.13
VPS37A-201ENST00000324849 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
VPS37A-201ENST00000324849 CHMP3Q9Y3E7 222 aa22.1■■□□□ 1.13
VPS37A-201ENST00000324849 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
VPS37A-201ENST00000324849 GTF2E1P29083 439 aaPredicted RBP22.09■■□□□ 1.13
VPS37A-201ENST00000324849 CYB5RLQ6IPT4 315 aa22.09■■□□□ 1.13
VPS37A-201ENST00000324849 RAB3GAP2Q9H2M9 1393 aa22.09■■□□□ 1.13
VPS37A-201ENST00000324849 HMMRO75330 724 aa22.09■■□□□ 1.13
VPS37A-201ENST00000324849 NUTM2FA1L443 756 aa22.08■■□□□ 1.13
VPS37A-201ENST00000324849 G3V3G9 751 aa22.07■■□□□ 1.12
VPS37A-201ENST00000324849 DCAF8Q5TAQ9 597 aa22.07■■□□□ 1.12
VPS37A-201ENST00000324849 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
VPS37A-201ENST00000324849 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
VPS37A-201ENST00000324849 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
VPS37A-201ENST00000324849 GPATCH3Q96I76 525 aa22.06■■□□□ 1.12
VPS37A-201ENST00000324849 TRAK1Q9UPV9 953 aa22.05■■□□□ 1.12
VPS37A-201ENST00000324849 NOP58Q9Y2X3 529 aaKnown RBP22.05■■□□□ 1.12
VPS37A-201ENST00000324849 RAPGEF2Q9Y4G8 1499 aa22.05■■□□□ 1.12
VPS37A-201ENST00000324849 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
VPS37A-201ENST00000324849 SMC4Q9NTJ3 1288 aa22.05■■□□□ 1.12
VPS37A-201ENST00000324849 VGFO15240 615 aaPredicted RBP22.04■■□□□ 1.12
VPS37A-201ENST00000324849 NLRP13Q86W25 1043 aa22.02■■□□□ 1.12
VPS37A-201ENST00000324849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.02■■□□□ 1.124e-7■■■□□ 14.7
VPS37A-201ENST00000324849 FHOD3Q2V2M9 1422 aa22.01■■□□□ 1.11
VPS37A-201ENST00000324849 PTPRGP23470 1445 aa22.01■■□□□ 1.11
VPS37A-201ENST00000324849 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
VPS37A-201ENST00000324849 HTATSF1O43719 755 aaKnown RBP22.01■■□□□ 1.11
VPS37A-201ENST00000324849 SLC4A10Q6U841 1118 aa22.01■■□□□ 1.11
VPS37A-201ENST00000324849 L1TD1Q5T7N2 865 aaKnown RBP21.99■■□□□ 1.11
VPS37A-201ENST00000324849 PMFBP1Q8TBY8 1022 aa21.98■■□□□ 1.11
VPS37A-201ENST00000324849 FRAT2O75474 233 aaPredicted RBP21.98■■□□□ 1.11
VPS37A-201ENST00000324849 CCDC34Q96HJ3 373 aa21.97■■□□□ 1.11
VPS37A-201ENST00000324849 CHAF1AQ13111 956 aaPredicted RBP21.95■■□□□ 1.1
VPS37A-201ENST00000324849 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
VPS37A-201ENST00000324849 DRC7Q8IY82 874 aa21.94■■□□□ 1.1
VPS37A-201ENST00000324849 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
VPS37A-201ENST00000324849 EVA1CP58658 441 aa21.94■■□□□ 1.1
VPS37A-201ENST00000324849 SPRYD3Q8NCJ5 442 aa21.94■■□□□ 1.1
VPS37A-201ENST00000324849 TRIM6-TRIM34B2RNG4 842 aa21.94■■□□□ 1.1
VPS37A-201ENST00000324849 COG3Q96JB2 828 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms