RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 CDK11AQ9UQ88 783 aaPredicted RBP34.74■■■■□ 3.15
ME3-201ENST00000323418 CDC42BPBQ9Y5S2 1711 aa34.74■■■■□ 3.15
ME3-201ENST00000323418 CCDC18Q5T9S5 1454 aa34.73■■■■□ 3.15
ME3-201ENST00000323418 YEATS2Q9ULM3 1422 aa34.72■■■■□ 3.15
ME3-201ENST00000323418 PTPRMP28827 1452 aa34.72■■■■□ 3.15
ME3-201ENST00000323418 SCAPERQ9BY12 1400 aa34.72■■■■□ 3.15
ME3-201ENST00000323418 MAGI2Q86UL8 1455 aa34.71■■■■□ 3.15
ME3-201ENST00000323418 CLIP1P30622 1438 aa34.7■■■■□ 3.15
ME3-201ENST00000323418 FYCO1Q9BQS8 1478 aa34.69■■■■□ 3.14
ME3-201ENST00000323418 PREX2Q70Z35 1606 aa34.68■■■■□ 3.14
ME3-201ENST00000323418 RIMS1Q86UR5 1692 aaKnown RBP34.64■■■■□ 3.14
ME3-201ENST00000323418 ARHGAP5Q13017 1502 aa34.64■■■■□ 3.14
ME3-201ENST00000323418 KDM5CP41229 1560 aa34.62■■■■□ 3.13
ME3-201ENST00000323418 CDC42BPAQ5VT25 1732 aa34.62■■■■□ 3.13
ME3-201ENST00000323418 EFCAB2Q5VUJ9 269 aa34.62■■■■□ 3.13
ME3-201ENST00000323418 ARID4BQ4LE39 1312 aaPredicted RBP34.57■■■■□ 3.13
ME3-201ENST00000323418 ZNF518AQ6AHZ1 1483 aa34.56■■■■□ 3.12
ME3-201ENST00000323418 ITSN2Q9NZM3 1697 aa34.54■■■■□ 3.12
ME3-201ENST00000323418 ABCC1P33527 1531 aa34.54■■■■□ 3.12
ME3-201ENST00000323418 FER1L4A9Z1Z3 1794 aa34.51■■■■□ 3.12
ME3-201ENST00000323418 ATP10AO60312 1499 aa34.5■■■■□ 3.11
ME3-201ENST00000323418 ARHGEF12Q9NZN5 1544 aa34.49■■■■□ 3.11
ME3-201ENST00000323418 C9orf84Q5VXU9 1444 aa34.48■■■■□ 3.11
ME3-201ENST00000323418 DIP2CQ9Y2E4 1556 aa34.47■■■■□ 3.11
ME3-201ENST00000323418 ABCA6Q8N139 1617 aa34.44■■■■□ 3.1
ME3-201ENST00000323418 REREQ9P2R6 1566 aa34.43■■■■□ 3.1
ME3-201ENST00000323418 AFAP1Q8N556 730 aa34.42■■■■□ 3.1
ME3-201ENST00000323418 LMTK3Q96Q04 1460 aa34.41■■■■□ 3.1
ME3-201ENST00000323418 SAMD9LQ8IVG5 1584 aa34.4■■■■□ 3.1
ME3-201ENST00000323418 MLH3Q9UHC1 1453 aa34.4■■■■□ 3.1
ME3-201ENST00000323418 TRAPPC8Q9Y2L5 1435 aa34.4■■■■□ 3.1
ME3-201ENST00000323418 KIDINS220Q9ULH0 1771 aa34.39■■■■□ 3.1
ME3-201ENST00000323418 GPATCH8Q9UKJ3 1502 aaKnown RBP34.37■■■■□ 3.09
ME3-201ENST00000323418 CEP162Q5TB80 1403 aa34.35■■■■□ 3.09
ME3-201ENST00000323418 MLECQ14165 292 aa34.3■■■■□ 3.08
ME3-201ENST00000323418 SYCP2Q9BX26 1530 aa34.29■■■■□ 3.08
ME3-201ENST00000323418 AGLP35573 1532 aa34.26■■■■□ 3.08
ME3-201ENST00000323418 EHBP1L1Q8N3D4 1523 aa34.25■■■■□ 3.07
ME3-201ENST00000323418 TIAM1Q13009 1591 aa34.24■■■■□ 3.07
ME3-201ENST00000323418 MTUS2Q5JR59 1369 aa34.21■■■■□ 3.07
ME3-201ENST00000323418 ILDR1Q86SU0 546 aaPredicted RBP34.19■■■■□ 3.06
ME3-201ENST00000323418 INO80Q9ULG1 1556 aaPredicted RBP34.19■■■■□ 3.06
ME3-201ENST00000323418 PREX1Q8TCU6 1659 aa34.19■■■■□ 3.06
ME3-201ENST00000323418 KIAA1107Q9UPP5 1409 aa34.18■■■■□ 3.06
ME3-201ENST00000323418 CCNB3Q8WWL7 1395 aa34.16■■■■□ 3.06
ME3-201ENST00000323418 C3P01024 1663 aa34.15■■■■□ 3.06
ME3-201ENST00000323418 PLEKHH2Q8IVE3 1493 aa34.14■■■■□ 3.06
ME3-201ENST00000323418 ZNF777Q9ULD5 760 aaPredicted RBP34.14■■■■□ 3.06
ME3-201ENST00000323418 PLPPR3Q6T4P5 718 aa34.13■■■■□ 3.05
ME3-201ENST00000323418 MYT1LQ9UL68 1186 aa34.13■■■■□ 3.05
ME3-201ENST00000323418 ATP7AQ04656 1500 aa34.13■■■■□ 3.05
ME3-201ENST00000323418 PLXNC1O60486 1568 aa34.1■■■■□ 3.05
ME3-201ENST00000323418 HNRNPMP52272 730 aaKnown RBP eCLIP34.09■■■■□ 3.05
ME3-201ENST00000323418 CFDP1Q9UEE9 299 aaPredicted RBP34.09■■■■□ 3.05
ME3-201ENST00000323418 SUPT6HQ7KZ85 1726 aaKnown RBP34.07■■■■□ 3.05
ME3-201ENST00000323418 HSPA2P54652 639 aa34.07■■■■□ 3.04
ME3-201ENST00000323418 SETD1BQ9UPS6 1966 aaKnown RBP34.06■■■■□ 3.04
ME3-201ENST00000323418 CEBPAP49715 358 aaPredicted RBP34.06■■■■□ 3.04
ME3-201ENST00000323418 MBD5Q9P267 1494 aa34.03■■■■□ 3.04
ME3-201ENST00000323418 SPAG9O60271 1321 aaKnown RBP34.03■■■■□ 3.04
ME3-201ENST00000323418 MROH2AA6NES4 1674 aa34.02■■■■□ 3.04
ME3-201ENST00000323418 ADGBQ8N7X0 1667 aa34.01■■■■□ 3.04
ME3-201ENST00000323418 LOC105371045A0A1W2PR82 267 aa34.01■■■■□ 3.03
ME3-201ENST00000323418 NCOA2Q15596 1464 aa34.01■■■■□ 3.03
ME3-201ENST00000323418 VPS8Q8N3P4 1428 aa33.99■■■■□ 3.03
ME3-201ENST00000323418 ZNF644Q9H582 1327 aaPredicted RBP33.99■■■■□ 3.03
ME3-201ENST00000323418 STRCQ7RTU9 1775 aa33.95■■■■□ 3.03
ME3-201ENST00000323418 A2MP01023 1474 aa33.95■■■■□ 3.03
ME3-201ENST00000323418 CNTLNQ9NXG0 1405 aa33.94■■■■□ 3.02
ME3-201ENST00000323418 CLTCQ00610 1675 aaKnown RBP33.9■■■■□ 3.02
ME3-201ENST00000323418 CAMSAP2Q08AD1 1489 aa33.9■■■■□ 3.02
ME3-201ENST00000323418 UHRF1BP1Q6BDS2 1440 aa33.9■■■■□ 3.02
ME3-201ENST00000323418 LRRC9Q6ZRR7 1453 aa33.89■■■■□ 3.02
ME3-201ENST00000323418 RTEL1-TNFRSF6BF6WH68 1400 aa33.87■■■■□ 3.01
ME3-201ENST00000323418 MAP3K1Q13233 1512 aa33.87■■■■□ 3.01
ME3-201ENST00000323418 CCDC141Q6ZP82 1450 aa33.84■■■■□ 3.01
ME3-201ENST00000323418 ARHGEF5Q12774 1597 aa33.83■■■■□ 3.01
ME3-201ENST00000323418 ESF1Q9H501 851 aaKnown RBP33.8■■■■□ 3
ME3-201ENST00000323418 NPATQ14207 1427 aa33.79■■■■□ 3
ME3-201ENST00000323418 FBXO41Q8TF61 875 aa33.78■■■■□ 3
ME3-201ENST00000323418 ZMYM3Q14202 1370 aa33.77■■■■□ 3
ME3-201ENST00000323418 ZNF142P52746 1687 aaPredicted RBP33.74■■■□□ 2.99
ME3-201ENST00000323418 DHX29Q7Z478 1369 aaKnown RBP33.72■■■□□ 2.99
ME3-201ENST00000323418 MYO3AQ8NEV4 1616 aa33.72■■■□□ 2.99
ME3-201ENST00000323418 KANK4Q5T7N3 995 aaPredicted RBP33.71■■■□□ 2.99
ME3-201ENST00000323418 MAST1Q9Y2H9 1570 aa33.69■■■□□ 2.98
ME3-201ENST00000323418 PTPRKQ15262 1439 aa33.69■■■□□ 2.98
ME3-201ENST00000323418 RSPH4AQ5TD94 716 aa33.67■■■□□ 2.98
ME3-201ENST00000323418 GGT6Q6P531 493 aa33.66■■■□□ 2.98
ME3-201ENST00000323418 NCOA1Q15788 1441 aa33.64■■■□□ 2.98
ME3-201ENST00000323418 PPP6R1Q9UPN7 881 aa33.64■■■□□ 2.98
ME3-201ENST00000323418 FAM135AQ9P2D6 1515 aa33.63■■■□□ 2.97
ME3-201ENST00000323418 MYOM3Q5VTT5 1437 aa33.63■■■□□ 2.97
ME3-201ENST00000323418 PTPRTO14522 1441 aa33.62■■■□□ 2.97
ME3-201ENST00000323418 MIA2Q96PC5 1412 aa33.62■■■□□ 2.97
ME3-201ENST00000323418 CAMSAP1Q5T5Y3 1602 aa33.61■■■□□ 2.97
ME3-201ENST00000323418 CEP170BQ9Y4F5 1589 aaPredicted RBP33.6■■■□□ 2.97
ME3-201ENST00000323418 KDM5DQ9BY66 1539 aa33.58■■■□□ 2.97
ME3-201ENST00000323418 CERKQ8TCT0 537 aa33.57■■■□□ 2.96
ME3-201ENST00000323418 DMRT2Q9Y5R5 561 aa33.57■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms