RNA–Protein interactions for RNA: ENST00000323224.7

TYMS-201, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 1,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-201ENST00000323224 SIGLEC1Q9BZZ2 1709 aa30.49■■■□□ 2.47
TYMS-201ENST00000323224 FYCO1Q9BQS8 1478 aa30.49■■■□□ 2.47
TYMS-201ENST00000323224 POGZQ7Z3K3 1410 aa30.48■■■□□ 2.47
TYMS-201ENST00000323224 HECW2Q9P2P5 1572 aa30.47■■■□□ 2.47
TYMS-201ENST00000323224 ZFYVE16Q7Z3T8 1539 aa30.46■■■□□ 2.47
TYMS-201ENST00000323224 EFCAB2Q5VUJ9 269 aa30.46■■■□□ 2.47
TYMS-201ENST00000323224 ARID4BQ4LE39 1312 aaPredicted RBP30.45■■■□□ 2.47
TYMS-201ENST00000323224 ARHGAP5Q13017 1502 aa30.45■■■□□ 2.47
TYMS-201ENST00000323224 CDC42BPBQ9Y5S2 1711 aa30.45■■■□□ 2.46
TYMS-201ENST00000323224 MADDQ8WXG6 1647 aa30.43■■■□□ 2.46
TYMS-201ENST00000323224 PTPRMP28827 1452 aa30.4■■■□□ 2.46
TYMS-201ENST00000323224 PREX2Q70Z35 1606 aa30.39■■■□□ 2.46
TYMS-201ENST00000323224 MAGI2Q86UL8 1455 aa30.38■■■□□ 2.45
TYMS-201ENST00000323224 CDC42BPAQ5VT25 1732 aa30.36■■■□□ 2.45
TYMS-201ENST00000323224 RIMS1Q86UR5 1692 aaKnown RBP30.33■■■□□ 2.45
TYMS-201ENST00000323224 AFAP1Q8N556 730 aa30.32■■■□□ 2.44
TYMS-201ENST00000323224 CEP162Q5TB80 1403 aa30.31■■■□□ 2.44
TYMS-201ENST00000323224 ARHGEF12Q9NZN5 1544 aa30.31■■■□□ 2.44
TYMS-201ENST00000323224 KDM5CP41229 1560 aa30.3■■■□□ 2.44
TYMS-201ENST00000323224 ZNF518AQ6AHZ1 1483 aa30.29■■■□□ 2.44
TYMS-201ENST00000323224 ABCC1P33527 1531 aa30.28■■■□□ 2.44
TYMS-201ENST00000323224 ATP10AO60312 1499 aa30.26■■■□□ 2.43
TYMS-201ENST00000323224 ITSN2Q9NZM3 1697 aa30.26■■■□□ 2.43
TYMS-201ENST00000323224 MLECQ14165 292 aa30.25■■■□□ 2.43
TYMS-201ENST00000323224 TRAPPC8Q9Y2L5 1435 aa30.25■■■□□ 2.43
TYMS-201ENST00000323224 C9orf84Q5VXU9 1444 aa30.23■■■□□ 2.43
TYMS-201ENST00000323224 LOC105371045A0A1W2PR82 267 aa30.22■■■□□ 2.43
TYMS-201ENST00000323224 GPATCH8Q9UKJ3 1502 aaKnown RBP30.21■■■□□ 2.43
TYMS-201ENST00000323224 DIP2CQ9Y2E4 1556 aa30.21■■■□□ 2.43
TYMS-201ENST00000323224 SAMD9LQ8IVG5 1584 aa30.2■■■□□ 2.43
TYMS-201ENST00000323224 ABCA6Q8N139 1617 aa30.19■■■□□ 2.42
TYMS-201ENST00000323224 FER1L4A9Z1Z3 1794 aa30.19■■■□□ 2.42
TYMS-201ENST00000323224 PLPPR3Q6T4P5 718 aa30.18■■■□□ 2.42
TYMS-201ENST00000323224 ZNF777Q9ULD5 760 aaPredicted RBP30.17■■■□□ 2.42
TYMS-201ENST00000323224 MYT1LQ9UL68 1186 aa30.16■■■□□ 2.42
TYMS-201ENST00000323224 MTUS2Q5JR59 1369 aa30.15■■■□□ 2.42
TYMS-201ENST00000323224 MLH3Q9UHC1 1453 aa30.14■■■□□ 2.42
TYMS-201ENST00000323224 SYCP2Q9BX26 1530 aa30.14■■■□□ 2.42
TYMS-201ENST00000323224 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
TYMS-201ENST00000323224 LMTK3Q96Q04 1460 aa30.1■■■□□ 2.41
TYMS-201ENST00000323224 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
TYMS-201ENST00000323224 TIAM1Q13009 1591 aa30.08■■■□□ 2.41
TYMS-201ENST00000323224 EHBP1L1Q8N3D4 1523 aa30.08■■■□□ 2.41
TYMS-201ENST00000323224 REREQ9P2R6 1566 aa30.08■■■□□ 2.41
TYMS-201ENST00000323224 HNRNPMP52272 730 aaKnown RBP eCLIP30.07■■■□□ 2.41e-7■■■■■ 27.4
TYMS-201ENST00000323224 CFDP1Q9UEE9 299 aaPredicted RBP30.06■■■□□ 2.4
TYMS-201ENST00000323224 ZNF644Q9H582 1327 aaPredicted RBP30■■■□□ 2.39
TYMS-201ENST00000323224 CEBPAP49715 358 aaPredicted RBP29.99■■■□□ 2.39
TYMS-201ENST00000323224 KIAA1107Q9UPP5 1409 aa29.98■■■□□ 2.39
TYMS-201ENST00000323224 AGLP35573 1532 aa29.98■■■□□ 2.39
TYMS-201ENST00000323224 HSPA2P54652 639 aa29.96■■■□□ 2.39
TYMS-201ENST00000323224 SPAG9O60271 1321 aaKnown RBP29.95■■■□□ 2.39
TYMS-201ENST00000323224 VPS8Q8N3P4 1428 aa29.95■■■□□ 2.39
TYMS-201ENST00000323224 PLEKHH2Q8IVE3 1493 aa29.95■■■□□ 2.39
TYMS-201ENST00000323224 INO80Q9ULG1 1556 aaPredicted RBP29.95■■■□□ 2.39
TYMS-201ENST00000323224 ATP7AQ04656 1500 aa29.94■■■□□ 2.38
TYMS-201ENST00000323224 NCOA2Q15596 1464 aa29.94■■■□□ 2.38
TYMS-201ENST00000323224 SUPT6HQ7KZ85 1726 aaKnown RBP29.93■■■□□ 2.38
TYMS-201ENST00000323224 ILDR1Q86SU0 546 aaPredicted RBP29.91■■■□□ 2.38
TYMS-201ENST00000323224 MBD5Q9P267 1494 aa29.89■■■□□ 2.37
TYMS-201ENST00000323224 C3P01024 1663 aa29.88■■■□□ 2.37
TYMS-201ENST00000323224 PREX1Q8TCU6 1659 aa29.86■■■□□ 2.37
TYMS-201ENST00000323224 PLXNC1O60486 1568 aa29.84■■■□□ 2.37
TYMS-201ENST00000323224 LRRC9Q6ZRR7 1453 aa29.84■■■□□ 2.37
TYMS-201ENST00000323224 A2MP01023 1474 aa29.81■■■□□ 2.36
TYMS-201ENST00000323224 CAMSAP2Q08AD1 1489 aa29.81■■■□□ 2.36
TYMS-201ENST00000323224 KANK4Q5T7N3 995 aaPredicted RBP29.8■■■□□ 2.36
TYMS-201ENST00000323224 ADGBQ8N7X0 1667 aa29.77■■■□□ 2.36
TYMS-201ENST00000323224 ESF1Q9H501 851 aaKnown RBP29.76■■■□□ 2.36
TYMS-201ENST00000323224 SETD1BQ9UPS6 1966 aaKnown RBP29.76■■■□□ 2.35
TYMS-201ENST00000323224 CCDC141Q6ZP82 1450 aa29.74■■■□□ 2.35
TYMS-201ENST00000323224 MAP3K1Q13233 1512 aa29.73■■■□□ 2.35
TYMS-201ENST00000323224 CLTCQ00610 1675 aaKnown RBP29.72■■■□□ 2.35
TYMS-201ENST00000323224 CNTLNQ9NXG0 1405 aa29.72■■■□□ 2.35
TYMS-201ENST00000323224 MROH2AA6NES4 1674 aa29.72■■■□□ 2.35
TYMS-201ENST00000323224 UHRF1BP1Q6BDS2 1440 aa29.71■■■□□ 2.35
TYMS-201ENST00000323224 RTEL1-TNFRSF6BF6WH68 1400 aa29.7■■■□□ 2.35
TYMS-201ENST00000323224 GGT6Q6P531 493 aa29.68■■■□□ 2.34
TYMS-201ENST00000323224 STRCQ7RTU9 1775 aa29.67■■■□□ 2.34
TYMS-201ENST00000323224 ARHGEF5Q12774 1597 aa29.66■■■□□ 2.34
TYMS-201ENST00000323224 ZMYM3Q14202 1370 aa29.66■■■□□ 2.34
TYMS-201ENST00000323224 DHX29Q7Z478 1369 aaKnown RBP29.63■■■□□ 2.33
TYMS-201ENST00000323224 MYOM3Q5VTT5 1437 aa29.6■■■□□ 2.33
TYMS-201ENST00000323224 NPATQ14207 1427 aa29.57■■■□□ 2.32
TYMS-201ENST00000323224 RSPH4AQ5TD94 716 aa29.57■■■□□ 2.32
TYMS-201ENST00000323224 KIF3BO15066 747 aa29.55■■■□□ 2.32
TYMS-201ENST00000323224 PTPRKQ15262 1439 aa29.55■■■□□ 2.32
TYMS-201ENST00000323224 MIA2Q96PC5 1412 aa29.53■■■□□ 2.32
TYMS-201ENST00000323224 FBXO41Q8TF61 875 aa29.52■■■□□ 2.32
TYMS-201ENST00000323224 MAST1Q9Y2H9 1570 aa29.52■■■□□ 2.32
TYMS-201ENST00000323224 MYO3AQ8NEV4 1616 aa29.51■■■□□ 2.32
TYMS-201ENST00000323224 TSPY4P0CV99 314 aa29.51■■■□□ 2.32
TYMS-201ENST00000323224 TSPY10P0CW01 314 aa29.51■■■□□ 2.32
TYMS-201ENST00000323224 APLP2Q06481 763 aa29.48■■■□□ 2.31
TYMS-201ENST00000323224 PPP6R1Q9UPN7 881 aa29.48■■■□□ 2.31
TYMS-201ENST00000323224 NCOA1Q15788 1441 aa29.46■■■□□ 2.31
TYMS-201ENST00000323224 CAMSAP1Q5T5Y3 1602 aa29.46■■■□□ 2.31
TYMS-201ENST00000323224 ZNF142P52746 1687 aaPredicted RBP29.46■■■□□ 2.31
TYMS-201ENST00000323224 PTPN23Q9H3S7 1636 aa29.45■■■□□ 2.31
TYMS-201ENST00000323224 KDM5DQ9BY66 1539 aa29.45■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms