RNA–Protein interactions for RNA: ENST00000322099.11

PCBP4-201, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 1,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-201ENST00000322099 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
PCBP4-201ENST00000322099 ANP32EQ9BTT0 268 aa22.05■■□□□ 1.12
PCBP4-201ENST00000322099 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
PCBP4-201ENST00000322099 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
PCBP4-201ENST00000322099 DENND4BO75064 1496 aaPredicted RBP22.04■■□□□ 1.12
PCBP4-201ENST00000322099 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
PCBP4-201ENST00000322099 SHROOM2Q13796 1616 aa22■■□□□ 1.11
PCBP4-201ENST00000322099 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
PCBP4-201ENST00000322099 EIF4G2P78344 907 aaKnown RBP eCLIP21.99■■□□□ 1.11
PCBP4-201ENST00000322099 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
PCBP4-201ENST00000322099 WASHC2AQ641Q2 1341 aa21.98■■□□□ 1.11
PCBP4-201ENST00000322099 HSPA5P11021 654 aaKnown RBP21.98■■□□□ 1.11
PCBP4-201ENST00000322099 CNTLNQ9NXG0 1405 aa21.96■■□□□ 1.11
PCBP4-201ENST00000322099 MPHOSPH9Q99550 1183 aa21.95■■□□□ 1.1
PCBP4-201ENST00000322099 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
PCBP4-201ENST00000322099 ERICH6BQ5W0A0 696 aa21.94■■□□□ 1.1
PCBP4-201ENST00000322099 ABCA8O94911 1581 aa21.94■■□□□ 1.1
PCBP4-201ENST00000322099 PTPRGP23470 1445 aa21.94■■□□□ 1.1
PCBP4-201ENST00000322099 KDM6BO15054 1643 aa21.93■■□□□ 1.1
PCBP4-201ENST00000322099 CHIC2Q9UKJ5 165 aa21.92■■□□□ 1.1
PCBP4-201ENST00000322099 HNRNPUQ00839 825 aaKnown RBP eCLIP21.91■■□□□ 1.1
PCBP4-201ENST00000322099 NCOA1Q15788 1441 aa21.91■■□□□ 1.1
PCBP4-201ENST00000322099 RBM19Q9Y4C8 960 aaKnown RBP21.9■■□□□ 1.1
PCBP4-201ENST00000322099 RPRD2Q5VT52 1461 aaKnown RBP21.9■■□□□ 1.1
PCBP4-201ENST00000322099 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.1
PCBP4-201ENST00000322099 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
PCBP4-201ENST00000322099 DAPK1P53355 1430 aa21.89■■□□□ 1.09
PCBP4-201ENST00000322099 DNMT1P26358 1616 aaKnown RBP21.88■■□□□ 1.09
PCBP4-201ENST00000322099 ANKRD30BQ9BXX2 1392 aa21.88■■□□□ 1.09
PCBP4-201ENST00000322099 L3MBTL2Q969R5 705 aa21.87■■□□□ 1.09
PCBP4-201ENST00000322099 CCDC7Q96M83 1385 aa21.86■■□□□ 1.09
PCBP4-201ENST00000322099 ATP10BO94823 1461 aa21.84■■□□□ 1.09
PCBP4-201ENST00000322099 TEX14Q8IWB6 1497 aa21.84■■□□□ 1.09
PCBP4-201ENST00000322099 TROQ12816 1431 aaPredicted RBP21.83■■□□□ 1.09
PCBP4-201ENST00000322099 ABCC5O15440 1437 aa21.82■■□□□ 1.08
PCBP4-201ENST00000322099 POLR1AO95602 1720 aaPredicted RBP21.81■■□□□ 1.08
PCBP4-201ENST00000322099 PRKRIP1Q9H875 184 aaPredicted RBP21.79■■□□□ 1.08
PCBP4-201ENST00000322099 SPATA31E1Q6ZUB1 1445 aa21.79■■□□□ 1.08
PCBP4-201ENST00000322099 PLEKHD1A6NEE1 506 aa21.76■■□□□ 1.07
PCBP4-201ENST00000322099 ZBED9Q6R2W3 1325 aa21.75■■□□□ 1.07
PCBP4-201ENST00000322099 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
PCBP4-201ENST00000322099 ADCY10Q96PN6 1610 aa21.72■■□□□ 1.07
PCBP4-201ENST00000322099 KIF14Q15058 1648 aa21.72■■□□□ 1.07
PCBP4-201ENST00000322099 C11orf95C9JLR9 678 aaPredicted RBP21.72■■□□□ 1.07
PCBP4-201ENST00000322099 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
PCBP4-201ENST00000322099 PPP4R2Q9NY27 417 aa21.72■■□□□ 1.07
PCBP4-201ENST00000322099 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
PCBP4-201ENST00000322099 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
PCBP4-201ENST00000322099 ABCC2Q92887 1545 aa21.71■■□□□ 1.07
PCBP4-201ENST00000322099 ITSN2Q9NZM3 1697 aa21.7■■□□□ 1.06
PCBP4-201ENST00000322099 FOXD1Q16676 465 aa21.7■■□□□ 1.06
PCBP4-201ENST00000322099 ADGRL2O95490 1459 aa21.7■■□□□ 1.06
PCBP4-201ENST00000322099 ADGBQ8N7X0 1667 aa21.69■■□□□ 1.06
PCBP4-201ENST00000322099 KIF7Q2M1P5 1343 aa21.69■■□□□ 1.06
PCBP4-201ENST00000322099 PZPP20742 1482 aa21.69■■□□□ 1.06
PCBP4-201ENST00000322099 MRS2Q9HD23 443 aa21.68■■□□□ 1.06
PCBP4-201ENST00000322099 MBD5Q9P267 1494 aa21.68■■□□□ 1.06
PCBP4-201ENST00000322099 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
PCBP4-201ENST00000322099 ARID4BQ4LE39 1312 aaPredicted RBP21.67■■□□□ 1.06
PCBP4-201ENST00000322099 CAMSAP2Q08AD1 1489 aa21.66■■□□□ 1.06
PCBP4-201ENST00000322099 CCDC184Q52MB2 194 aa21.65■■□□□ 1.06
PCBP4-201ENST00000322099 ZNF644Q9H582 1327 aaPredicted RBP21.65■■□□□ 1.06
PCBP4-201ENST00000322099 UHRF1BP1LA0JNW5 1464 aa21.65■■□□□ 1.06
PCBP4-201ENST00000322099 ABCC10Q5T3U5 1492 aa21.65■■□□□ 1.06
PCBP4-201ENST00000322099 KIAA1107Q9UPP5 1409 aa21.64■■□□□ 1.06
PCBP4-201ENST00000322099 CFDP1Q9UEE9 299 aaPredicted RBP21.63■■□□□ 1.05
PCBP4-201ENST00000322099 CROCC2H7BZ55 1655 aa21.61■■□□□ 1.05
PCBP4-201ENST00000322099 FAM9BQ8IZU0 186 aa21.61■■□□□ 1.05
PCBP4-201ENST00000322099 IRX6P78412 446 aaPredicted RBP21.58■■□□□ 1.05
PCBP4-201ENST00000322099 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
PCBP4-201ENST00000322099 DHX29Q7Z478 1369 aaKnown RBP21.57■■□□□ 1.04
PCBP4-201ENST00000322099 UHRF1BP1Q6BDS2 1440 aa21.56■■□□□ 1.04
PCBP4-201ENST00000322099 SMG6Q86US8 1419 aaKnown RBP21.56■■□□□ 1.04
PCBP4-201ENST00000322099 ROCK2O75116 1388 aaKnown RBP21.56■■□□□ 1.04
PCBP4-201ENST00000322099 CDC42BPAQ5VT25 1732 aa21.55■■□□□ 1.04
PCBP4-201ENST00000322099 USP47Q96K76 1375 aa21.55■■□□□ 1.04
PCBP4-201ENST00000322099 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
PCBP4-201ENST00000322099 SHANK2Q9UPX8 1470 aa21.55■■□□□ 1.04
PCBP4-201ENST00000322099 ZNF777Q9ULD5 760 aaPredicted RBP21.54■■□□□ 1.04
PCBP4-201ENST00000322099 KDM5CP41229 1560 aa21.53■■□□□ 1.04
PCBP4-201ENST00000322099 ARHGEF12Q9NZN5 1544 aa21.53■■□□□ 1.04
PCBP4-201ENST00000322099 MSH5O43196 834 aa21.53■■□□□ 1.04
PCBP4-201ENST00000322099 RALGAPBQ86X10 1494 aa21.51■■□□□ 1.03
PCBP4-201ENST00000322099 ANKRD50Q9ULJ7 1429 aa21.5■■□□□ 1.03
PCBP4-201ENST00000322099 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
PCBP4-201ENST00000322099 BCORL1Q5H9F3 1711 aa21.49■■□□□ 1.03
PCBP4-201ENST00000322099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.48■■□□□ 1.03
PCBP4-201ENST00000322099 PKD2Q13563 968 aa21.48■■□□□ 1.03
PCBP4-201ENST00000322099 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
PCBP4-201ENST00000322099 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
PCBP4-201ENST00000322099 TTC37Q6PGP7 1564 aa21.46■■□□□ 1.03
PCBP4-201ENST00000322099 NUDCQ9Y266 331 aa21.45■■□□□ 1.02
PCBP4-201ENST00000322099 PREX2Q70Z35 1606 aa21.45■■□□□ 1.02
PCBP4-201ENST00000322099 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
PCBP4-201ENST00000322099 ERICH6Q7L0X2 663 aa21.43■■□□□ 1.02
PCBP4-201ENST00000322099 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
PCBP4-201ENST00000322099 C9orf84Q5VXU9 1444 aa21.41■■□□□ 1.02
PCBP4-201ENST00000322099 B4GALNT3Q6L9W6 998 aa21.41■■□□□ 1.02
PCBP4-201ENST00000322099 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
PCBP4-201ENST00000322099 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms