RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 KIF7Q2M1P5 1343 aa24.24■■□□□ 1.47
PRKCB-202ENST00000321728 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
PRKCB-202ENST00000321728 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
PRKCB-202ENST00000321728 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
PRKCB-202ENST00000321728 IPO9Q96P70 1041 aaKnown RBP24.22■■□□□ 1.47
PRKCB-202ENST00000321728 GCC2Q8IWJ2 1684 aa24.22■■□□□ 1.47
PRKCB-202ENST00000321728 UGGT2Q9NYU1 1516 aa24.22■■□□□ 1.47
PRKCB-202ENST00000321728 SMG6Q86US8 1419 aaKnown RBP24.22■■□□□ 1.47
PRKCB-202ENST00000321728 KDM6BO15054 1643 aa24.22■■□□□ 1.47
PRKCB-202ENST00000321728 RTL5Q5HYW3 569 aaPredicted RBP24.21■■□□□ 1.47
PRKCB-202ENST00000321728 NUDCQ9Y266 331 aa24.2■■□□□ 1.46
PRKCB-202ENST00000321728 ZBTB47Q9UFB7 747 aaPredicted RBP24.19■■□□□ 1.46
PRKCB-202ENST00000321728 SAMD9Q5K651 1589 aa24.18■■□□□ 1.46
PRKCB-202ENST00000321728 SENP3-EIF4A1A0A087X0R7 540 aa24.18■■□□□ 1.46
PRKCB-202ENST00000321728 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
PRKCB-202ENST00000321728 POLR3GLQ9BT43 218 aa24.15■■□□□ 1.46
PRKCB-202ENST00000321728 CDK13Q14004 1512 aaKnown RBP24.15■■□□□ 1.46
PRKCB-202ENST00000321728 TCOF1Q13428 1488 aaKnown RBP24.14■■□□□ 1.46
PRKCB-202ENST00000321728 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
PRKCB-202ENST00000321728 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
PRKCB-202ENST00000321728 SPATA31E1Q6ZUB1 1445 aa24.11■■□□□ 1.45
PRKCB-202ENST00000321728 RNF123Q5XPI4 1314 aa24.11■■□□□ 1.45
PRKCB-202ENST00000321728 RPRD2Q5VT52 1461 aaKnown RBP24.11■■□□□ 1.45
PRKCB-202ENST00000321728 ANKRD30BQ9BXX2 1392 aa24.1■■□□□ 1.45
PRKCB-202ENST00000321728 LAMC3Q9Y6N6 1575 aa24.1■■□□□ 1.45
PRKCB-202ENST00000321728 ZNF644Q9H582 1327 aaPredicted RBP24.09■■□□□ 1.45
PRKCB-202ENST00000321728 TEX14Q8IWB6 1497 aa24.07■■□□□ 1.44
PRKCB-202ENST00000321728 POLR1AO95602 1720 aaPredicted RBP24.06■■□□□ 1.44
PRKCB-202ENST00000321728 SLC4A1APQ9BWU0 796 aaKnown RBP24.06■■□□□ 1.44
PRKCB-202ENST00000321728 DHX29Q7Z478 1369 aaKnown RBP24.04■■□□□ 1.44
PRKCB-202ENST00000321728 ZNF326Q5BKZ1 582 aaKnown RBP24.03■■□□□ 1.44
PRKCB-202ENST00000321728 NPM2Q86SE8 214 aaKnown RBP24.02■■□□□ 1.44
PRKCB-202ENST00000321728 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
PRKCB-202ENST00000321728 EPRSP07814 1512 aaKnown RBP24.01■■□□□ 1.43
PRKCB-202ENST00000321728 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
PRKCB-202ENST00000321728 TMC1Q8TDI8 760 aa24■■□□□ 1.43
PRKCB-202ENST00000321728 PNISRQ8TF01 805 aaKnown RBP23.97■■□□□ 1.43
PRKCB-202ENST00000321728 PRKCSHP14314 528 aaPredicted RBP23.96■■□□□ 1.43
PRKCB-202ENST00000321728 USP47Q96K76 1375 aa23.95■■□□□ 1.42
PRKCB-202ENST00000321728 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
PRKCB-202ENST00000321728 ANO8Q9HCE9 1232 aaPredicted RBP23.93■■□□□ 1.42
PRKCB-202ENST00000321728 DAPK1P53355 1430 aa23.92■■□□□ 1.42
PRKCB-202ENST00000321728 ZNF777Q9ULD5 760 aaPredicted RBP23.92■■□□□ 1.42
PRKCB-202ENST00000321728 ROCK1Q13464 1354 aa23.92■■□□□ 1.42
PRKCB-202ENST00000321728 LAS1LQ9Y4W2 734 aaKnown RBP23.91■■□□□ 1.42
PRKCB-202ENST00000321728 IQGAP2Q13576 1575 aa23.9■■□□□ 1.42
PRKCB-202ENST00000321728 IL27Q8NEV9 243 aa23.9■■□□□ 1.42
PRKCB-202ENST00000321728 EXOC6Q8TAG9 804 aa23.89■■□□□ 1.42
PRKCB-202ENST00000321728 BCORL1Q5H9F3 1711 aa23.89■■□□□ 1.42
PRKCB-202ENST00000321728 TARBP1Q13395 1621 aaKnown RBP23.89■■□□□ 1.41
PRKCB-202ENST00000321728 TCERG1O14776 1098 aaKnown RBP23.88■■□□□ 1.41
PRKCB-202ENST00000321728 NEFMP07197 916 aa23.88■■□□□ 1.41
PRKCB-202ENST00000321728 RRP1P56182 461 aaKnown RBP23.88■■□□□ 1.41
PRKCB-202ENST00000321728 ABCC5O15440 1437 aa23.87■■□□□ 1.41
PRKCB-202ENST00000321728 PDE4AP27815 886 aa23.86■■□□□ 1.41
PRKCB-202ENST00000321728 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
PRKCB-202ENST00000321728 RTN4Q9NQC3 1192 aaKnown RBP23.85■■□□□ 1.41
PRKCB-202ENST00000321728 WDR62O43379 1518 aa23.85■■□□□ 1.41
PRKCB-202ENST00000321728 ARID4BQ4LE39 1312 aaPredicted RBP23.85■■□□□ 1.41
PRKCB-202ENST00000321728 SALL2Q9Y467 1007 aaPredicted RBP23.84■■□□□ 1.41
PRKCB-202ENST00000321728 RCAN3Q9UKA8 241 aa23.82■■□□□ 1.4
PRKCB-202ENST00000321728 ROCK2O75116 1388 aaKnown RBP23.81■■□□□ 1.4
PRKCB-202ENST00000321728 DNMT1P26358 1616 aaKnown RBP23.81■■□□□ 1.4
PRKCB-202ENST00000321728 USP35Q9P2H5 1018 aa23.8■■□□□ 1.4
PRKCB-202ENST00000321728 MBD5Q9P267 1494 aa23.8■■□□□ 1.4
PRKCB-202ENST00000321728 KIF15Q9NS87 1388 aa23.8■■□□□ 1.4
PRKCB-202ENST00000321728 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
PRKCB-202ENST00000321728 BACH2Q9BYV9 841 aa23.79■■□□□ 1.4
PRKCB-202ENST00000321728 PZPP20742 1482 aa23.79■■□□□ 1.4
PRKCB-202ENST00000321728 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
PRKCB-202ENST00000321728 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
PRKCB-202ENST00000321728 KDM5CP41229 1560 aa23.77■■□□□ 1.4
PRKCB-202ENST00000321728 MYBBP1AQ9BQG0 1328 aaKnown RBP23.77■■□□□ 1.4
PRKCB-202ENST00000321728 CARD11Q9BXL7 1154 aa23.77■■□□□ 1.39
PRKCB-202ENST00000321728 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
PRKCB-202ENST00000321728 PKD2Q13563 968 aa23.76■■□□□ 1.39
PRKCB-202ENST00000321728 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
PRKCB-202ENST00000321728 MS4A1P11836 297 aa23.75■■□□□ 1.39
PRKCB-202ENST00000321728 KIF14Q15058 1648 aa23.75■■□□□ 1.39
PRKCB-202ENST00000321728 PPM1GO15355 546 aaPredicted RBP23.75■■□□□ 1.39
PRKCB-202ENST00000321728 FBLN2P98095 1184 aa23.75■■□□□ 1.39
PRKCB-202ENST00000321728 CFDP1Q9UEE9 299 aaPredicted RBP23.74■■□□□ 1.39
PRKCB-202ENST00000321728 KIAA1107Q9UPP5 1409 aa23.74■■□□□ 1.39
PRKCB-202ENST00000321728 RALBP1Q15311 655 aa23.73■■□□□ 1.39
PRKCB-202ENST00000321728 NUP153P49790 1475 aaKnown RBP23.72■■□□□ 1.39
PRKCB-202ENST00000321728 KDM2AQ9Y2K7 1162 aa23.7■■□□□ 1.39
PRKCB-202ENST00000321728 ST20-MTHFSA0A0A6YYL1 179 aa23.69■■□□□ 1.38
PRKCB-202ENST00000321728 KTN1Q86UP2 1357 aaKnown RBP23.67■■□□□ 1.38
PRKCB-202ENST00000321728 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
PRKCB-202ENST00000321728 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
PRKCB-202ENST00000321728 RALGAPBQ86X10 1494 aa23.65■■□□□ 1.38
PRKCB-202ENST00000321728 WASHC2CQ9Y4E1 1318 aa23.65■■□□□ 1.38
PRKCB-202ENST00000321728 PLIN1O60240 522 aa23.65■■□□□ 1.38
PRKCB-202ENST00000321728 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
PRKCB-202ENST00000321728 DDRGK1Q96HY6 314 aa23.64■■□□□ 1.38
PRKCB-202ENST00000321728 SKAP1Q86WV1 359 aa23.64■■□□□ 1.37
PRKCB-202ENST00000321728 CAMSAP2Q08AD1 1489 aa23.63■■□□□ 1.37
PRKCB-202ENST00000321728 PLB1Q6P1J6 1458 aa23.63■■□□□ 1.37
PRKCB-202ENST00000321728 NLRP13Q86W25 1043 aa23.63■■□□□ 1.37
PRKCB-202ENST00000321728 KIAA0556O60303 1618 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms