RNA–Protein interactions for RNA: ENST00000316856.7

RAD23A-201, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAD23A, Length 1,736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-201ENST00000316856 CHIC2Q9UKJ5 165 aa26.65■■□□□ 1.86
RAD23A-201ENST00000316856 CLSPNQ9HAW4 1339 aa26.65■■□□□ 1.86
RAD23A-201ENST00000316856 TTC37Q6PGP7 1564 aa26.64■■□□□ 1.86
RAD23A-201ENST00000316856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.64■■□□□ 1.862e-9■■■■■ 33.4
RAD23A-201ENST00000316856 GCC2Q8IWJ2 1684 aa26.63■■□□□ 1.85
RAD23A-201ENST00000316856 AKNAQ7Z591 1439 aa26.63■■□□□ 1.85
RAD23A-201ENST00000316856 PREX2Q70Z35 1606 aa26.62■■□□□ 1.85
RAD23A-201ENST00000316856 CDC42BPBQ9Y5S2 1711 aa26.62■■□□□ 1.85
RAD23A-201ENST00000316856 MAPKBP1O60336 1514 aa26.61■■□□□ 1.85
RAD23A-201ENST00000316856 ZNF777Q9ULD5 760 aaPredicted RBP26.61■■□□□ 1.85
RAD23A-201ENST00000316856 RRP7BPQ9NSQ0 103 aa26.6■■□□□ 1.85
RAD23A-201ENST00000316856 CROCC2H7BZ55 1655 aa26.57■■□□□ 1.84
RAD23A-201ENST00000316856 KDM6BO15054 1643 aa26.57■■□□□ 1.84
RAD23A-201ENST00000316856 ROCK1Q13464 1354 aa26.56■■□□□ 1.84
RAD23A-201ENST00000316856 KCNH8Q96L42 1107 aa26.54■■□□□ 1.84
RAD23A-201ENST00000316856 SAMD9LQ8IVG5 1584 aa26.54■■□□□ 1.84
RAD23A-201ENST00000316856 MYO5CQ9NQX4 1742 aa26.52■■□□□ 1.84
RAD23A-201ENST00000316856 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
RAD23A-201ENST00000316856 WDR7Q9Y4E6 1490 aa26.48■■□□□ 1.83
RAD23A-201ENST00000316856 MBD5Q9P267 1494 aa26.48■■□□□ 1.83
RAD23A-201ENST00000316856 ARHGEF5Q12774 1597 aa26.47■■□□□ 1.83
RAD23A-201ENST00000316856 ADGRL2O95490 1459 aa26.47■■□□□ 1.83
RAD23A-201ENST00000316856 ARHGAP5Q13017 1502 aa26.47■■□□□ 1.83
RAD23A-201ENST00000316856 NCOA1Q15788 1441 aa26.44■■□□□ 1.82
RAD23A-201ENST00000316856 HNRNPMP52272 730 aaKnown RBP eCLIP26.44■■□□□ 1.82
RAD23A-201ENST00000316856 SHANK2Q9UPX8 1470 aa26.44■■□□□ 1.82
RAD23A-201ENST00000316856 PLCH2O75038 1416 aa26.43■■□□□ 1.82
RAD23A-201ENST00000316856 ASXL2Q76L83 1435 aa26.42■■□□□ 1.82
RAD23A-201ENST00000316856 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
RAD23A-201ENST00000316856 SYCP2Q9BX26 1530 aa26.39■■□□□ 1.82
RAD23A-201ENST00000316856 CCDC141Q6ZP82 1450 aa26.37■■□□□ 1.81
RAD23A-201ENST00000316856 ANKRD30AQ9BXX3 1397 aa26.36■■□□□ 1.81
RAD23A-201ENST00000316856 ABCA9Q8IUA7 1624 aa26.36■■□□□ 1.81
RAD23A-201ENST00000316856 DENND4BO75064 1496 aaPredicted RBP26.36■■□□□ 1.81
RAD23A-201ENST00000316856 ARHGEF12Q9NZN5 1544 aa26.35■■□□□ 1.81
RAD23A-201ENST00000316856 RIMBP3CA6NJZ7 1639 aa26.35■■□□□ 1.81
RAD23A-201ENST00000316856 RIMBP3BA6NNM3 1639 aa26.35■■□□□ 1.81
RAD23A-201ENST00000316856 RIMBP3Q9UFD9 1639 aa26.35■■□□□ 1.81
RAD23A-201ENST00000316856 KIAA1107Q9UPP5 1409 aa26.34■■□□□ 1.81
RAD23A-201ENST00000316856 ARAP3Q8WWN8 1544 aa26.34■■□□□ 1.81
RAD23A-201ENST00000316856 SIN3AQ96ST3 1273 aa26.34■■□□□ 1.81
RAD23A-201ENST00000316856 PLEKHH2Q8IVE3 1493 aa26.33■■□□□ 1.81
RAD23A-201ENST00000316856 NPM1P06748 294 aaKnown RBP eCLIP26.31■■□□□ 1.8
RAD23A-201ENST00000316856 TSPY4P0CV99 314 aa26.31■■□□□ 1.8
RAD23A-201ENST00000316856 TSPY10P0CW01 314 aa26.31■■□□□ 1.8
RAD23A-201ENST00000316856 EFCAB2Q5VUJ9 269 aa26.31■■□□□ 1.8
RAD23A-201ENST00000316856 TRIM52Q96A61 297 aa26.31■■□□□ 1.8
RAD23A-201ENST00000316856 ABCC1P33527 1531 aa26.3■■□□□ 1.8
RAD23A-201ENST00000316856 MAST1Q9Y2H9 1570 aa26.3■■□□□ 1.8
RAD23A-201ENST00000316856 RSPH4AQ5TD94 716 aa26.29■■□□□ 1.8
RAD23A-201ENST00000316856 ANKRD50Q9ULJ7 1429 aa26.25■■□□□ 1.79
RAD23A-201ENST00000316856 NEUROD1Q13562 356 aa26.24■■□□□ 1.79
RAD23A-201ENST00000316856 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
RAD23A-201ENST00000316856 KIF15Q9NS87 1388 aa26.23■■□□□ 1.79
RAD23A-201ENST00000316856 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
RAD23A-201ENST00000316856 CYB5RLQ6IPT4 315 aa26.22■■□□□ 1.79
RAD23A-201ENST00000316856 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
RAD23A-201ENST00000316856 PZPP20742 1482 aa26.21■■□□□ 1.79
RAD23A-201ENST00000316856 FANCAO15360 1455 aa26.2■■□□□ 1.78
RAD23A-201ENST00000316856 PLXNC1O60486 1568 aa26.18■■□□□ 1.78
RAD23A-201ENST00000316856 FOXD1Q16676 465 aa26.13■■□□□ 1.77
RAD23A-201ENST00000316856 TIMELESSQ9UNS1 1208 aa26.13■■□□□ 1.77
RAD23A-201ENST00000316856 ZNF316A6NFI3 1004 aaPredicted RBP26.12■■□□□ 1.77
RAD23A-201ENST00000316856 SLC4A1APQ9BWU0 796 aaKnown RBP26.11■■□□□ 1.77
RAD23A-201ENST00000316856 KDM5DQ9BY66 1539 aa26.1■■□□□ 1.77
RAD23A-201ENST00000316856 CD109Q6YHK3 1445 aa26.1■■□□□ 1.77
RAD23A-201ENST00000316856 ADGRL1O94910 1474 aa26.09■■□□□ 1.77
RAD23A-201ENST00000316856 AFAP1Q8N556 730 aa26.08■■□□□ 1.77
RAD23A-201ENST00000316856 ANKRD30BQ9BXX2 1392 aa26.08■■□□□ 1.77
RAD23A-201ENST00000316856 SCAPERQ9BY12 1400 aa26.07■■□□□ 1.76
RAD23A-201ENST00000316856 ZFYVE16Q7Z3T8 1539 aa26.07■■□□□ 1.76
RAD23A-201ENST00000316856 DUOX2Q9NRD8 1548 aa26.05■■□□□ 1.76
RAD23A-201ENST00000316856 NUP155O75694 1391 aa26.04■■□□□ 1.76
RAD23A-201ENST00000316856 RTEL1-TNFRSF6BF6WH68 1400 aa26.04■■□□□ 1.76
RAD23A-201ENST00000316856 SPAG9O60271 1321 aaKnown RBP26.04■■□□□ 1.76
RAD23A-201ENST00000316856 TONSLQ96HA7 1378 aa26.03■■□□□ 1.76
RAD23A-201ENST00000316856 UNC13BO14795 1591 aa26.03■■□□□ 1.76
RAD23A-201ENST00000316856 INO80Q9ULG1 1556 aaPredicted RBP26.03■■□□□ 1.76
RAD23A-201ENST00000316856 PPP1R15AO75807 674 aaPredicted RBP26.02■■□□□ 1.76
RAD23A-201ENST00000316856 CFAP74Q9C0B2 1584 aa26.02■■□□□ 1.76
RAD23A-201ENST00000316856 ERBINQ96RT1 1412 aa25.99■■□□□ 1.75
RAD23A-201ENST00000316856 PKD2Q13563 968 aa25.99■■□□□ 1.75
RAD23A-201ENST00000316856 MAP3K4Q9Y6R4 1608 aa25.99■■□□□ 1.75
RAD23A-201ENST00000316856 ATP7AQ04656 1500 aa25.99■■□□□ 1.75
RAD23A-201ENST00000316856 GLI2P10070 1586 aa25.98■■□□□ 1.75
RAD23A-201ENST00000316856 RPRD2Q5VT52 1461 aaKnown RBP25.96■■□□□ 1.75
RAD23A-201ENST00000316856 FAM135AQ9P2D6 1515 aa25.95■■□□□ 1.75
RAD23A-201ENST00000316856 MAGI2Q86UL8 1455 aa25.93■■□□□ 1.74
RAD23A-201ENST00000316856 NEO1Q92859 1461 aa25.92■■□□□ 1.74
RAD23A-201ENST00000316856 DIP2BQ9P265 1576 aa25.92■■□□□ 1.74
RAD23A-201ENST00000316856 KIDINS220Q9ULH0 1771 aa25.91■■□□□ 1.74
RAD23A-201ENST00000316856 IQGAP3Q86VI3 1631 aa25.91■■□□□ 1.74
RAD23A-201ENST00000316856 POGZQ7Z3K3 1410 aa25.91■■□□□ 1.74
RAD23A-201ENST00000316856 ZNF518AQ6AHZ1 1483 aa25.91■■□□□ 1.74
RAD23A-201ENST00000316856 KDM5CP41229 1560 aa25.9■■□□□ 1.74
RAD23A-201ENST00000316856 DIEXFQ68CQ4 756 aaKnown RBP25.88■■□□□ 1.73
RAD23A-201ENST00000316856 TEX14Q8IWB6 1497 aa25.87■■□□□ 1.73
RAD23A-201ENST00000316856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.86■■□□□ 1.732e-7■■■□□ 15.8
RAD23A-201ENST00000316856 L3MBTL2Q969R5 705 aa25.85■■□□□ 1.73
RAD23A-201ENST00000316856 DEPDC5O75140 1603 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms