RNA–Protein interactions for RNA: ENST00000316856.7

RAD23A-201, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAD23A, Length 1,736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-201ENST00000316856 NISCHQ9Y2I1 1504 aa40.72■■■■■ 4.11
RAD23A-201ENST00000316856 CCDC180Q9P1Z9 1646 aa35.41■■■■□ 3.26
RAD23A-201ENST00000316856 ZCCHC6Q5VYS8 1495 aaKnown RBP34.23■■■■□ 3.07
RAD23A-201ENST00000316856 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
RAD23A-201ENST00000316856 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
RAD23A-201ENST00000316856 ABCC9O60706 1549 aa33.46■■■□□ 2.95
RAD23A-201ENST00000316856 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
RAD23A-201ENST00000316856 MYO15BQ96JP2 1530 aa33.15■■■□□ 2.9
RAD23A-201ENST00000316856 NACADO15069 1562 aa32.94■■■□□ 2.86
RAD23A-201ENST00000316856 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
RAD23A-201ENST00000316856 RB1CC1Q8TDY2 1594 aa32.63■■■□□ 2.81
RAD23A-201ENST00000316856 UNC13AQ9UPW8 1703 aa32.09■■■□□ 2.73
RAD23A-201ENST00000316856 SUPT5HO00267 1087 aaKnown RBP32.09■■■□□ 2.73
RAD23A-201ENST00000316856 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
RAD23A-201ENST00000316856 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
RAD23A-201ENST00000316856 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
RAD23A-201ENST00000316856 PABPN1Q86U42 306 aaKnown RBP eCLIP31.59■■■□□ 2.65
RAD23A-201ENST00000316856 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.63
RAD23A-201ENST00000316856 BAZ1AQ9NRL2 1556 aaPredicted RBP31.38■■■□□ 2.61
RAD23A-201ENST00000316856 SMARCA4P51532 1647 aa31.28■■■□□ 2.6
RAD23A-201ENST00000316856 WIZO95785 1651 aa31.26■■■□□ 2.59
RAD23A-201ENST00000316856 TOP2AP11388 1531 aaKnown RBP30.89■■■□□ 2.53
RAD23A-201ENST00000316856 PEG3Q9GZU2 1588 aa30.87■■■□□ 2.53
RAD23A-201ENST00000316856 CHIC1Q5VXU3 224 aa30.79■■■□□ 2.52
RAD23A-201ENST00000316856 ATAD2BQ9ULI0 1458 aa30.74■■■□□ 2.51
RAD23A-201ENST00000316856 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
RAD23A-201ENST00000316856 SMARCA2P51531 1590 aa30.67■■■□□ 2.5
RAD23A-201ENST00000316856 CCDC88BA6NC98 1476 aa30.6■■■□□ 2.49
RAD23A-201ENST00000316856 BAZ1BQ9UIG0 1483 aaKnown RBP30.53■■■□□ 2.48
RAD23A-201ENST00000316856 NCAPD3P42695 1498 aa30.43■■■□□ 2.46
RAD23A-201ENST00000316856 HMGXB3Q12766 1538 aa30.39■■■□□ 2.45
RAD23A-201ENST00000316856 CC2D2AQ9P2K1 1620 aa30.27■■■□□ 2.44
RAD23A-201ENST00000316856 TRIM41Q8WV44 630 aa30.1■■■□□ 2.41
RAD23A-201ENST00000316856 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
RAD23A-201ENST00000316856 CFTRP13569 1480 aa29.79■■■□□ 2.36
RAD23A-201ENST00000316856 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
RAD23A-201ENST00000316856 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
RAD23A-201ENST00000316856 AEBP2Q6ZN18 517 aaPredicted RBP29.67■■■□□ 2.34
RAD23A-201ENST00000316856 CADPSQ9ULU8 1353 aa29.66■■■□□ 2.34
RAD23A-201ENST00000316856 LOC105371045A0A1W2PR82 267 aa29.65■■■□□ 2.34
RAD23A-201ENST00000316856 PRDM2Q13029 1718 aa29.64■■■□□ 2.34
RAD23A-201ENST00000316856 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
RAD23A-201ENST00000316856 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
RAD23A-201ENST00000316856 TOP2BQ02880 1626 aa29.5■■■□□ 2.31
RAD23A-201ENST00000316856 BIVM-ERCC5R4GMW8 1640 aa29.48■■■□□ 2.31
RAD23A-201ENST00000316856 SOGA1O94964 1423 aa29.47■■■□□ 2.31
RAD23A-201ENST00000316856 NESP48681 1621 aa29.45■■■□□ 2.3
RAD23A-201ENST00000316856 CUX1P39880 1505 aa29.45■■■□□ 2.3
RAD23A-201ENST00000316856 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
RAD23A-201ENST00000316856 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
RAD23A-201ENST00000316856 FANCD2Q9BXW9 1451 aa29.35■■■□□ 2.29
RAD23A-201ENST00000316856 EEA1Q15075 1411 aa29.3■■■□□ 2.28
RAD23A-201ENST00000316856 EHMT2Q96KQ7 1210 aa29.24■■■□□ 2.27
RAD23A-201ENST00000316856 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.26
RAD23A-201ENST00000316856 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
RAD23A-201ENST00000316856 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
RAD23A-201ENST00000316856 DNMBPQ6XZF7 1577 aa29.1■■■□□ 2.25
RAD23A-201ENST00000316856 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
RAD23A-201ENST00000316856 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
RAD23A-201ENST00000316856 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
RAD23A-201ENST00000316856 URB2Q14146 1524 aaKnown RBP29.02■■■□□ 2.24
RAD23A-201ENST00000316856 KIF21BO75037 1637 aa28.99■■■□□ 2.23
RAD23A-201ENST00000316856 GOLGA3Q08378 1498 aa28.96■■■□□ 2.23
RAD23A-201ENST00000316856 KIF27Q86VH2 1401 aa28.95■■■□□ 2.23
RAD23A-201ENST00000316856 POLA1P09884 1462 aaPredicted RBP28.92■■■□□ 2.22
RAD23A-201ENST00000316856 CUX2O14529 1486 aa28.9■■■□□ 2.22
RAD23A-201ENST00000316856 TNIKQ9UKE5 1360 aa28.9■■■□□ 2.22
RAD23A-201ENST00000316856 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
RAD23A-201ENST00000316856 RAPGEF2Q9Y4G8 1499 aa28.85■■■□□ 2.21
RAD23A-201ENST00000316856 PRXQ9BXM0 1461 aa28.83■■■□□ 2.21
RAD23A-201ENST00000316856 UBTFP17480 764 aaKnown RBP28.8■■■□□ 2.2
RAD23A-201ENST00000316856 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
RAD23A-201ENST00000316856 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
RAD23A-201ENST00000316856 CEP162Q5TB80 1403 aa28.77■■■□□ 2.2
RAD23A-201ENST00000316856 ERICH3Q5RHP9 1530 aa28.76■■■□□ 2.19
RAD23A-201ENST00000316856 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
RAD23A-201ENST00000316856 IGF1RP08069 1367 aa28.74■■■□□ 2.19
RAD23A-201ENST00000316856 TARBP1Q13395 1621 aaKnown RBP28.64■■■□□ 2.17
RAD23A-201ENST00000316856 WDR62O43379 1518 aa28.63■■■□□ 2.17
RAD23A-201ENST00000316856 ERCC6Q03468 1493 aa28.6■■■□□ 2.17
RAD23A-201ENST00000316856 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
RAD23A-201ENST00000316856 CARMIL1Q5VZK9 1371 aa28.57■■■□□ 2.16
RAD23A-201ENST00000316856 THOC2Q8NI27 1593 aaKnown RBP28.55■■■□□ 2.16
RAD23A-201ENST00000316856 TDRD9Q8NDG6 1382 aaKnown RBP28.55■■■□□ 2.16
RAD23A-201ENST00000316856 CLIP1P30622 1438 aa28.51■■■□□ 2.15
RAD23A-201ENST00000316856 GAPVD1Q14C86 1478 aa28.49■■■□□ 2.15
RAD23A-201ENST00000316856 CUL7Q14999 1698 aa28.46■■■□□ 2.15
RAD23A-201ENST00000316856 IFT140Q96RY7 1462 aa28.42■■■□□ 2.14
RAD23A-201ENST00000316856 RANGAP1P46060 587 aaPredicted RBP28.37■■■□□ 2.13
RAD23A-201ENST00000316856 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.137e-7■■■■■ 32.9
RAD23A-201ENST00000316856 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
RAD23A-201ENST00000316856 ZNF608Q9ULD9 1512 aaPredicted RBP28.35■■■□□ 2.13
RAD23A-201ENST00000316856 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
RAD23A-201ENST00000316856 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
RAD23A-201ENST00000316856 TRIM26Q12899 539 aaPredicted RBP28.27■■■□□ 2.12
RAD23A-201ENST00000316856 VPS8Q8N3P4 1428 aa28.27■■■□□ 2.12
RAD23A-201ENST00000316856 PPARGC1BQ86YN6 1023 aaKnown RBP28.26■■■□□ 2.12
RAD23A-201ENST00000316856 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
RAD23A-201ENST00000316856 ARHGAP35Q9NRY4 1499 aa28.23■■■□□ 2.11
RAD23A-201ENST00000316856 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms