RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 TNNT2P45379 298 aaPredicted RBP9.27□□□□□ -0.93
SOX6-201ENST00000316399 NRDCO43847 1150 aa9.26□□□□□ -0.93
SOX6-201ENST00000316399 HSPA5P11021 654 aaKnown RBP9.26□□□□□ -0.93
SOX6-201ENST00000316399 CASKIN1Q8WXD9 1431 aa9.26□□□□□ -0.93
SOX6-201ENST00000316399 ZBED9Q6R2W3 1325 aa9.25□□□□□ -0.93
SOX6-201ENST00000316399 SIN3AQ96ST3 1273 aa9.25□□□□□ -0.93
SOX6-201ENST00000316399 RRBP1Q9P2E9 1410 aaKnown RBP9.25□□□□□ -0.93
SOX6-201ENST00000316399 NUP155O75694 1391 aa9.24□□□□□ -0.93
SOX6-201ENST00000316399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.24□□□□□ -0.93
SOX6-201ENST00000316399 ZRSR1Q15695 479 aaKnown RBP9.24□□□□□ -0.93
SOX6-201ENST00000316399 HSCBQ8IWL3 235 aa9.24□□□□□ -0.93
SOX6-201ENST00000316399 FGD6Q6ZV73 1430 aa9.24□□□□□ -0.93
SOX6-201ENST00000316399 MIA2Q96PC5 1412 aa9.24□□□□□ -0.93
SOX6-201ENST00000316399 FHOD3Q2V2M9 1422 aa9.23□□□□□ -0.93
SOX6-201ENST00000316399 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
SOX6-201ENST00000316399 HDAC5Q9UQL6 1122 aa9.23□□□□□ -0.93
SOX6-201ENST00000316399 KANK4Q5T7N3 995 aaPredicted RBP9.23□□□□□ -0.93
SOX6-201ENST00000316399 FANCD2Q9BXW9 1451 aa9.23□□□□□ -0.93
SOX6-201ENST00000316399 MCCP23508 829 aa9.23□□□□□ -0.93
SOX6-201ENST00000316399 RWDD1Q9H446 243 aaPredicted RBP9.22□□□□□ -0.93
SOX6-201ENST00000316399 EFCAB2Q5VUJ9 269 aa9.22□□□□□ -0.93
SOX6-201ENST00000316399 SCAPERQ9BY12 1400 aa9.22□□□□□ -0.93
SOX6-201ENST00000316399 PKD2Q13563 968 aa9.22□□□□□ -0.93
SOX6-201ENST00000316399 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
SOX6-201ENST00000316399 MYBBP1AQ9BQG0 1328 aaKnown RBP9.22□□□□□ -0.93
SOX6-201ENST00000316399 DCAF11Q8TEB1 546 aa9.21□□□□□ -0.93
SOX6-201ENST00000316399 TOP2BQ02880 1626 aa9.21□□□□□ -0.93
SOX6-201ENST00000316399 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.93
SOX6-201ENST00000316399 EHBP1L1Q8N3D4 1523 aa9.2□□□□□ -0.94
SOX6-201ENST00000316399 MAP3K1Q13233 1512 aa9.2□□□□□ -0.94
SOX6-201ENST00000316399 GBP4Q96PP9 640 aa9.2□□□□□ -0.94
SOX6-201ENST00000316399 RCAN3Q9UKA8 241 aa9.2□□□□□ -0.94
SOX6-201ENST00000316399 RBM19Q9Y4C8 960 aaKnown RBP9.2□□□□□ -0.94
SOX6-201ENST00000316399 LRRC9Q6ZRR7 1453 aa9.19□□□□□ -0.94
SOX6-201ENST00000316399 PMFBP1Q8TBY8 1022 aa9.19□□□□□ -0.94
SOX6-201ENST00000316399 POGKQ9P215 609 aa9.19□□□□□ -0.94
SOX6-201ENST00000316399 IRX6P78412 446 aaPredicted RBP9.19□□□□□ -0.94
SOX6-201ENST00000316399 CFTRP13569 1480 aa9.19□□□□□ -0.94
SOX6-201ENST00000316399 SALL2Q9Y467 1007 aaPredicted RBP9.18□□□□□ -0.94
SOX6-201ENST00000316399 FGD5Q6ZNL6 1462 aa9.18□□□□□ -0.94
SOX6-201ENST00000316399 FANCIQ9NVI1 1328 aa9.18□□□□□ -0.94
SOX6-201ENST00000316399 LMOD3Q0VAK6 560 aa9.18□□□□□ -0.94
SOX6-201ENST00000316399 CHAF1AQ13111 956 aaPredicted RBP9.18□□□□□ -0.94
SOX6-201ENST00000316399 MORC1Q86VD1 984 aa9.18□□□□□ -0.94
SOX6-201ENST00000316399 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
SOX6-201ENST00000316399 WASHC2AQ641Q2 1341 aa9.17□□□□□ -0.94
SOX6-201ENST00000316399 WASHC2CQ9Y4E1 1318 aa9.17□□□□□ -0.94
SOX6-201ENST00000316399 CDK11BP21127 795 aaKnown RBP9.17□□□□□ -0.94
SOX6-201ENST00000316399 IPO9Q96P70 1041 aaKnown RBP9.17□□□□□ -0.94
SOX6-201ENST00000316399 RGL3Q3MIN7 710 aa9.17□□□□□ -0.94
SOX6-201ENST00000316399 SYAP1Q96A49 352 aaPredicted RBP9.17□□□□□ -0.94
SOX6-201ENST00000316399 HIRIP3Q9BW71 556 aaPredicted RBP9.17□□□□□ -0.94
SOX6-201ENST00000316399 CGNL1Q0VF96 1302 aa9.17□□□□□ -0.94
SOX6-201ENST00000316399 HDGFL2Q7Z4V5 671 aaPredicted RBP9.17□□□□□ -0.94
SOX6-201ENST00000316399 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
SOX6-201ENST00000316399 GAPVD1Q14C86 1478 aa9.16□□□□□ -0.94
SOX6-201ENST00000316399 PRXQ9BXM0 1461 aa9.16□□□□□ -0.94
SOX6-201ENST00000316399 HTATSF1O43719 755 aaKnown RBP9.16□□□□□ -0.94
SOX6-201ENST00000316399 TERF2IPQ9NYB0 399 aa9.16□□□□□ -0.94
SOX6-201ENST00000316399 AQRO60306 1485 aaKnown RBP eCLIP9.15□□□□□ -0.94
SOX6-201ENST00000316399 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.94
SOX6-201ENST00000316399 IGF1RP08069 1367 aa9.15□□□□□ -0.94
SOX6-201ENST00000316399 USP47Q96K76 1375 aa9.15□□□□□ -0.95
SOX6-201ENST00000316399 HFM1A2PYH4 1435 aa9.15□□□□□ -0.95
SOX6-201ENST00000316399 HSP90AB1P08238 724 aaKnown RBP9.15□□□□□ -0.95
SOX6-201ENST00000316399 CHMP4CQ96CF2 233 aa9.15□□□□□ -0.95
SOX6-201ENST00000316399 TDRD9Q8NDG6 1382 aaKnown RBP9.14□□□□□ -0.95
SOX6-201ENST00000316399 NINLQ9Y2I6 1382 aa9.14□□□□□ -0.95
SOX6-201ENST00000316399 HECW1Q76N89 1606 aa9.14□□□□□ -0.95
SOX6-201ENST00000316399 L3MBTL2Q969R5 705 aa9.14□□□□□ -0.95
SOX6-201ENST00000316399 GOLGA2Q08379 1002 aa9.14□□□□□ -0.95
SOX6-201ENST00000316399 RGS3P49796 1198 aa9.14□□□□□ -0.95
SOX6-201ENST00000316399 HMMRO75330 724 aa9.13□□□□□ -0.95
SOX6-201ENST00000316399 CENPQQ7L2Z9 268 aaPredicted RBP9.13□□□□□ -0.95
SOX6-201ENST00000316399 PRKRIP1Q9H875 184 aaPredicted RBP9.12□□□□□ -0.95
SOX6-201ENST00000316399 TIAM1Q13009 1591 aa9.12□□□□□ -0.95
SOX6-201ENST00000316399 NCOA2Q15596 1464 aa9.12□□□□□ -0.95
SOX6-201ENST00000316399 FRAT1Q92837 279 aaPredicted RBP9.11□□□□□ -0.95
SOX6-201ENST00000316399 DDX11L8A8MPP1 907 aa9.11□□□□□ -0.95
SOX6-201ENST00000316399 CENPJQ9HC77 1338 aaPredicted RBP9.11□□□□□ -0.95
SOX6-201ENST00000316399 BRD4O60885 1362 aaPredicted RBP9.11□□□□□ -0.95
SOX6-201ENST00000316399 PEG3Q9GZU2 1588 aa9.11□□□□□ -0.95
SOX6-201ENST00000316399 CC2D1BQ5T0F9 858 aaKnown RBP9.11□□□□□ -0.95
SOX6-201ENST00000316399 CSPP1Q1MSJ5 1256 aa9.11□□□□□ -0.95
SOX6-201ENST00000316399 BCL11AQ9H165 835 aa9.11□□□□□ -0.95
SOX6-201ENST00000316399 E9PSI1 815 aa9.1□□□□□ -0.95
SOX6-201ENST00000316399 MSNP26038 577 aaKnown RBP9.1□□□□□ -0.95
SOX6-201ENST00000316399 B4GALNT3Q6L9W6 998 aa9.1□□□□□ -0.95
SOX6-201ENST00000316399 TSHZ2Q9NRE2 1034 aa9.1□□□□□ -0.95
SOX6-201ENST00000316399 SKOR2Q2VWA4 1001 aaPredicted RBP9.1□□□□□ -0.95
SOX6-201ENST00000316399 SYNJ1O43426 1573 aa9.09□□□□□ -0.95
SOX6-201ENST00000316399 GRIN2BQ13224 1484 aa9.09□□□□□ -0.95
SOX6-201ENST00000316399 PHF14O94880 888 aa9.09□□□□□ -0.95
SOX6-201ENST00000316399 SPAG9O60271 1321 aaKnown RBP9.09□□□□□ -0.95
SOX6-201ENST00000316399 ROCK1Q13464 1354 aa9.09□□□□□ -0.95
SOX6-201ENST00000316399 DEKP35659 375 aaKnown RBP9.08□□□□□ -0.96
SOX6-201ENST00000316399 GOLGA6L4A6NEF3 574 aa9.08□□□□□ -0.96
SOX6-201ENST00000316399 CCDC34Q96HJ3 373 aa9.08□□□□□ -0.96
SOX6-201ENST00000316399 CUL7Q14999 1698 aa9.08□□□□□ -0.96
SOX6-201ENST00000316399 LAS1LQ9Y4W2 734 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms