RNA–Protein interactions for RNA: ENST00000315691.7

C3orf58-201, Transcript of chromosome 3 open reading frame 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf58, Length 4,346 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58-201ENST00000315691 CCDC18Q5T9S5 1454 aa22.58■■□□□ 1.2
C3orf58-201ENST00000315691 DDRGK1Q96HY6 314 aa22.57■■□□□ 1.2
C3orf58-201ENST00000315691 IL27Q8NEV9 243 aa22.57■■□□□ 1.2
C3orf58-201ENST00000315691 DNMBPQ6XZF7 1577 aa22.57■■□□□ 1.2
C3orf58-201ENST00000315691 DCAF11Q8TEB1 546 aa22.56■■□□□ 1.2
C3orf58-201ENST00000315691 TIAM1Q13009 1591 aa22.55■■□□□ 1.2
C3orf58-201ENST00000315691 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
C3orf58-201ENST00000315691 ANP32BQ92688 251 aaKnown RBP22.53■■□□□ 1.2
C3orf58-201ENST00000315691 NPM1P06748 294 aaKnown RBP eCLIP22.52■■□□□ 1.2
C3orf58-201ENST00000315691 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
C3orf58-201ENST00000315691 IPO9Q96P70 1041 aaKnown RBP22.52■■□□□ 1.2
C3orf58-201ENST00000315691 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.19
C3orf58-201ENST00000315691 MYOM3Q5VTT5 1437 aa22.5■■□□□ 1.19
C3orf58-201ENST00000315691 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
C3orf58-201ENST00000315691 ARID4BQ4LE39 1312 aaPredicted RBP22.48■■□□□ 1.19
C3orf58-201ENST00000315691 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
C3orf58-201ENST00000315691 NUP155O75694 1391 aa22.47■■□□□ 1.19
C3orf58-201ENST00000315691 PCF11O94913 1555 aaKnown RBP22.46■■□□□ 1.19
C3orf58-201ENST00000315691 MSH5O43196 834 aa22.44■■□□□ 1.18
C3orf58-201ENST00000315691 HSP90AA1P07900 732 aaKnown RBP22.44■■□□□ 1.18
C3orf58-201ENST00000315691 RSPH6AQ9H0K4 717 aa22.44■■□□□ 1.18
C3orf58-201ENST00000315691 TRIM44Q96DX7 344 aaPredicted RBP22.43■■□□□ 1.18
C3orf58-201ENST00000315691 GRIN2BQ13224 1484 aa22.4■■□□□ 1.18
C3orf58-201ENST00000315691 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
C3orf58-201ENST00000315691 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
C3orf58-201ENST00000315691 HSP90AA2PQ14568 343 aaPredicted RBP22.36■■□□□ 1.17
C3orf58-201ENST00000315691 ANKRD30AQ9BXX3 1397 aa22.36■■□□□ 1.17
C3orf58-201ENST00000315691 PNNQ9H307 717 aaKnown RBP22.35■■□□□ 1.17
C3orf58-201ENST00000315691 EFCAB5A4FU69 1503 aa22.35■■□□□ 1.17
C3orf58-201ENST00000315691 UACAQ9BZF9 1416 aa22.34■■□□□ 1.17
C3orf58-201ENST00000315691 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
C3orf58-201ENST00000315691 UBE2Q2Q8WVN8 375 aa22.34■■□□□ 1.17
C3orf58-201ENST00000315691 CDK13Q14004 1512 aaKnown RBP22.34■■□□□ 1.17
C3orf58-201ENST00000315691 UPF2Q9HAU5 1272 aaKnown RBP22.33■■□□□ 1.17
C3orf58-201ENST00000315691 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
C3orf58-201ENST00000315691 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
C3orf58-201ENST00000315691 PODXL2Q9NZ53 605 aa22.3■■□□□ 1.16
C3orf58-201ENST00000315691 ZNF608Q9ULD9 1512 aaPredicted RBP22.3■■□□□ 1.16
C3orf58-201ENST00000315691 TNNT2P45379 298 aaPredicted RBP22.3■■□□□ 1.16
C3orf58-201ENST00000315691 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
C3orf58-201ENST00000315691 PTPRGP23470 1445 aa22.3■■□□□ 1.16
C3orf58-201ENST00000315691 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
C3orf58-201ENST00000315691 USP35Q9P2H5 1018 aa22.29■■□□□ 1.16
C3orf58-201ENST00000315691 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
C3orf58-201ENST00000315691 PRG4Q92954 1404 aaPredicted RBP22.29■■□□□ 1.16
C3orf58-201ENST00000315691 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.16
C3orf58-201ENST00000315691 GSE1Q14687 1217 aa22.25■■□□□ 1.15
C3orf58-201ENST00000315691 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
C3orf58-201ENST00000315691 NAIPQ13075 1403 aa22.22■■□□□ 1.15
C3orf58-201ENST00000315691 HFM1A2PYH4 1435 aa22.22■■□□□ 1.15
C3orf58-201ENST00000315691 STAG3Q9UJ98 1225 aa22.21■■□□□ 1.15
C3orf58-201ENST00000315691 BECN1Q14457 450 aa22.21■■□□□ 1.15
C3orf58-201ENST00000315691 BRPF3Q9ULD4 1205 aa22.21■■□□□ 1.15
C3orf58-201ENST00000315691 ST20-MTHFSA0A0A6YYL1 179 aa22.2■■□□□ 1.14
C3orf58-201ENST00000315691 A0A0U1RQG5 324 aaPredicted RBP22.2■■□□□ 1.14
C3orf58-201ENST00000315691 IFT140Q96RY7 1462 aa22.19■■□□□ 1.14
C3orf58-201ENST00000315691 EPRSP07814 1512 aaKnown RBP22.19■■□□□ 1.14
C3orf58-201ENST00000315691 WASHC2AQ641Q2 1341 aa22.19■■□□□ 1.14
C3orf58-201ENST00000315691 EFCAB2Q5VUJ9 269 aa22.19■■□□□ 1.14
C3orf58-201ENST00000315691 NBPF8Q3BBV2 869 aa22.18■■□□□ 1.14
C3orf58-201ENST00000315691 L1TD1Q5T7N2 865 aaKnown RBP22.18■■□□□ 1.14
C3orf58-201ENST00000315691 PTPRKQ15262 1439 aa22.18■■□□□ 1.14
C3orf58-201ENST00000315691 WDR43Q15061 677 aaKnown RBP eCLIP22.17■■□□□ 1.14
C3orf58-201ENST00000315691 CUL7Q14999 1698 aa22.17■■□□□ 1.14
C3orf58-201ENST00000315691 ROCK2O75116 1388 aaKnown RBP22.16■■□□□ 1.14
C3orf58-201ENST00000315691 GGT6Q6P531 493 aa22.15■■□□□ 1.14
C3orf58-201ENST00000315691 EHBP1L1Q8N3D4 1523 aa22.15■■□□□ 1.14
C3orf58-201ENST00000315691 PRKRIP1Q9H875 184 aaPredicted RBP22.14■■□□□ 1.13
C3orf58-201ENST00000315691 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
C3orf58-201ENST00000315691 MAP3K1Q13233 1512 aa22.13■■□□□ 1.13
C3orf58-201ENST00000315691 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
C3orf58-201ENST00000315691 PLB1Q6P1J6 1458 aa22.12■■□□□ 1.13
C3orf58-201ENST00000315691 KIF3BO15066 747 aa22.12■■□□□ 1.13
C3orf58-201ENST00000315691 AMER1Q5JTC6 1135 aaPredicted RBP22.11■■□□□ 1.13
C3orf58-201ENST00000315691 ARID3AQ99856 593 aa22.11■■□□□ 1.13
C3orf58-201ENST00000315691 RGS3P49796 1198 aa22.08■■□□□ 1.13
C3orf58-201ENST00000315691 ANKRD50Q9ULJ7 1429 aa22.08■■□□□ 1.13
C3orf58-201ENST00000315691 SUPT6HQ7KZ85 1726 aaKnown RBP22.08■■□□□ 1.13
C3orf58-201ENST00000315691 MAPKBP1O60336 1514 aa22.08■■□□□ 1.13
C3orf58-201ENST00000315691 KIAA0586Q9BVV6 1533 aa22.08■■□□□ 1.13
C3orf58-201ENST00000315691 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.12
C3orf58-201ENST00000315691 USP47Q96K76 1375 aa22.08■■□□□ 1.12
C3orf58-201ENST00000315691 KIF15Q9NS87 1388 aa22.08■■□□□ 1.12
C3orf58-201ENST00000315691 SPAG9O60271 1321 aaKnown RBP22.07■■□□□ 1.12
C3orf58-201ENST00000315691 CCDC184Q52MB2 194 aa22.07■■□□□ 1.12
C3orf58-201ENST00000315691 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
C3orf58-201ENST00000315691 CDK11BP21127 795 aaKnown RBP22.06■■□□□ 1.12
C3orf58-201ENST00000315691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.05■■□□□ 1.12
C3orf58-201ENST00000315691 TMF1P82094 1093 aa22.05■■□□□ 1.12
C3orf58-201ENST00000315691 HECW1Q76N89 1606 aa22.05■■□□□ 1.12
C3orf58-201ENST00000315691 SAFB2Q14151 953 aaKnown RBP eCLIP22.04■■□□□ 1.12
C3orf58-201ENST00000315691 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.04■■□□□ 1.12
C3orf58-201ENST00000315691 NEUROD2Q15784 382 aa22.04■■□□□ 1.12
C3orf58-201ENST00000315691 ESF1Q9H501 851 aaKnown RBP22.04■■□□□ 1.12
C3orf58-201ENST00000315691 TROQ12816 1431 aaPredicted RBP22.04■■□□□ 1.12
C3orf58-201ENST00000315691 DAPK1P53355 1430 aa22.03■■□□□ 1.12
C3orf58-201ENST00000315691 SLC4A3P48751 1232 aa22.03■■□□□ 1.12
C3orf58-201ENST00000315691 C11orf95C9JLR9 678 aaPredicted RBP22.02■■□□□ 1.12
C3orf58-201ENST00000315691 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
C3orf58-201ENST00000315691 MIA2Q96PC5 1412 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms