RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 DENND4BO75064 1496 aaPredicted RBP22.33■■□□□ 1.17
TSC22D3-201ENST00000315660 TRIM52Q96A61 297 aa22.33■■□□□ 1.17
TSC22D3-201ENST00000315660 ADCY10Q96PN6 1610 aa22.32■■□□□ 1.16
TSC22D3-201ENST00000315660 MYT1Q01538 1121 aa22.32■■□□□ 1.16
TSC22D3-201ENST00000315660 ABCA8O94911 1581 aa22.32■■□□□ 1.16
TSC22D3-201ENST00000315660 ITSN2Q9NZM3 1697 aa22.3■■□□□ 1.16
TSC22D3-201ENST00000315660 KIF14Q15058 1648 aa22.3■■□□□ 1.16
TSC22D3-201ENST00000315660 GPATCH8Q9UKJ3 1502 aaKnown RBP22.29■■□□□ 1.16
TSC22D3-201ENST00000315660 CAMSAP2Q08AD1 1489 aa22.28■■□□□ 1.16
TSC22D3-201ENST00000315660 CFDP1Q9UEE9 299 aaPredicted RBP22.28■■□□□ 1.16
TSC22D3-201ENST00000315660 KDM5BQ9UGL1 1544 aa22.27■■□□□ 1.16
TSC22D3-201ENST00000315660 MPHOSPH9Q99550 1183 aa22.27■■□□□ 1.16
TSC22D3-201ENST00000315660 ATP10BO94823 1461 aa22.24■■□□□ 1.15
TSC22D3-201ENST00000315660 DDX10Q13206 875 aaKnown RBP22.23■■□□□ 1.15
TSC22D3-201ENST00000315660 PLEKHD1A6NEE1 506 aa22.22■■□□□ 1.15
TSC22D3-201ENST00000315660 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
TSC22D3-201ENST00000315660 PTPRGP23470 1445 aa22.18■■□□□ 1.14
TSC22D3-201ENST00000315660 CHD1O14646 1710 aa22.18■■□□□ 1.14
TSC22D3-201ENST00000315660 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
TSC22D3-201ENST00000315660 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
TSC22D3-201ENST00000315660 NCOA1Q15788 1441 aa22.17■■□□□ 1.14
TSC22D3-201ENST00000315660 ADGBQ8N7X0 1667 aa22.16■■□□□ 1.14
TSC22D3-201ENST00000315660 ADGRL2O95490 1459 aa22.16■■□□□ 1.14
TSC22D3-201ENST00000315660 CROCC2H7BZ55 1655 aa22.15■■□□□ 1.14
TSC22D3-201ENST00000315660 FOXD1Q16676 465 aa22.15■■□□□ 1.14
TSC22D3-201ENST00000315660 CDC42BPAQ5VT25 1732 aa22.14■■□□□ 1.14
TSC22D3-201ENST00000315660 ANKRD30BQ9BXX2 1392 aa22.14■■□□□ 1.14
TSC22D3-201ENST00000315660 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
TSC22D3-201ENST00000315660 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
TSC22D3-201ENST00000315660 RPRD2Q5VT52 1461 aaKnown RBP22.09■■□□□ 1.13
TSC22D3-201ENST00000315660 ANKRD30AQ9BXX3 1397 aa22.09■■□□□ 1.13
TSC22D3-201ENST00000315660 L3MBTL2Q969R5 705 aa22.08■■□□□ 1.13
TSC22D3-201ENST00000315660 PZPP20742 1482 aa22.08■■□□□ 1.13
TSC22D3-201ENST00000315660 KCNH8Q96L42 1107 aa22.08■■□□□ 1.13
TSC22D3-201ENST00000315660 SHANK2Q9UPX8 1470 aa22.06■■□□□ 1.12
TSC22D3-201ENST00000315660 TEX14Q8IWB6 1497 aa22.03■■□□□ 1.12
TSC22D3-201ENST00000315660 C9orf84Q5VXU9 1444 aa22.03■■□□□ 1.12
TSC22D3-201ENST00000315660 ANP32CO43423 234 aa22.02■■□□□ 1.12
TSC22D3-201ENST00000315660 ANKRD50Q9ULJ7 1429 aa22.02■■□□□ 1.12
TSC22D3-201ENST00000315660 HSPA5P11021 654 aaKnown RBP22.01■■□□□ 1.11
TSC22D3-201ENST00000315660 ARHGEF5Q12774 1597 aa21.99■■□□□ 1.11
TSC22D3-201ENST00000315660 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
TSC22D3-201ENST00000315660 ERCC6L2Q5T890 1561 aa21.98■■□□□ 1.11
TSC22D3-201ENST00000315660 EIF4G2P78344 907 aaKnown RBP eCLIP21.98■■□□□ 1.11
TSC22D3-201ENST00000315660 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
TSC22D3-201ENST00000315660 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
TSC22D3-201ENST00000315660 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
TSC22D3-201ENST00000315660 PREX2Q70Z35 1606 aa21.96■■□□□ 1.11
TSC22D3-201ENST00000315660 MBD5Q9P267 1494 aa21.96■■□□□ 1.11
TSC22D3-201ENST00000315660 HNRNPMP52272 730 aaKnown RBP eCLIP21.96■■□□□ 1.11
TSC22D3-201ENST00000315660 CDC42BPBQ9Y5S2 1711 aa21.95■■□□□ 1.1
TSC22D3-201ENST00000315660 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
TSC22D3-201ENST00000315660 SAMD9LQ8IVG5 1584 aa21.95■■□□□ 1.1
TSC22D3-201ENST00000315660 NBPF8Q3BBV2 869 aa21.94■■□□□ 1.1
TSC22D3-201ENST00000315660 PKD2Q13563 968 aa21.94■■□□□ 1.1
TSC22D3-201ENST00000315660 WASHC2AQ641Q2 1341 aa21.92■■□□□ 1.1
TSC22D3-201ENST00000315660 CCDC141Q6ZP82 1450 aa21.91■■□□□ 1.1
TSC22D3-201ENST00000315660 KIF15Q9NS87 1388 aa21.91■■□□□ 1.1
TSC22D3-201ENST00000315660 SUPT16HQ9Y5B9 1047 aaKnown RBP21.91■■□□□ 1.1
TSC22D3-201ENST00000315660 NUP155O75694 1391 aa21.9■■□□□ 1.1
TSC22D3-201ENST00000315660 CLASP1Q7Z460 1538 aa21.89■■□□□ 1.1
TSC22D3-201ENST00000315660 KDM5DQ9BY66 1539 aa21.89■■□□□ 1.1
TSC22D3-201ENST00000315660 TTC37Q6PGP7 1564 aa21.89■■□□□ 1.09
TSC22D3-201ENST00000315660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.89■■□□□ 1.09
TSC22D3-201ENST00000315660 RSPH4AQ5TD94 716 aa21.88■■□□□ 1.09
TSC22D3-201ENST00000315660 ARHGAP5Q13017 1502 aa21.85■■□□□ 1.09
TSC22D3-201ENST00000315660 SYCP2Q9BX26 1530 aa21.84■■□□□ 1.09
TSC22D3-201ENST00000315660 SPATA31E1Q6ZUB1 1445 aa21.83■■□□□ 1.08
TSC22D3-201ENST00000315660 CCDC7Q96M83 1385 aa21.81■■□□□ 1.08
TSC22D3-201ENST00000315660 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
TSC22D3-201ENST00000315660 UHRF1BP1LA0JNW5 1464 aa21.81■■□□□ 1.08
TSC22D3-201ENST00000315660 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
TSC22D3-201ENST00000315660 MAST1Q9Y2H9 1570 aa21.8■■□□□ 1.08
TSC22D3-201ENST00000315660 CNTLNQ9NXG0 1405 aa21.8■■□□□ 1.08
TSC22D3-201ENST00000315660 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
TSC22D3-201ENST00000315660 ZCCHC11Q5TAX3 1644 aaKnown RBP21.78■■□□□ 1.08
TSC22D3-201ENST00000315660 FAM135AQ9P2D6 1515 aa21.74■■□□□ 1.07
TSC22D3-201ENST00000315660 PLCH2O75038 1416 aa21.73■■□□□ 1.07
TSC22D3-201ENST00000315660 UHRF1BP1Q6BDS2 1440 aa21.73■■□□□ 1.07
TSC22D3-201ENST00000315660 ARHGEF12Q9NZN5 1544 aa21.73■■□□□ 1.07
TSC22D3-201ENST00000315660 PLXNC1O60486 1568 aa21.72■■□□□ 1.07
TSC22D3-201ENST00000315660 ZNF326Q5BKZ1 582 aaKnown RBP21.72■■□□□ 1.07
TSC22D3-201ENST00000315660 POLR1AO95602 1720 aaPredicted RBP21.72■■□□□ 1.07
TSC22D3-201ENST00000315660 KIF7Q2M1P5 1343 aa21.71■■□□□ 1.07
TSC22D3-201ENST00000315660 UNC13BO14795 1591 aa21.7■■□□□ 1.06
TSC22D3-201ENST00000315660 USP47Q96K76 1375 aa21.69■■□□□ 1.06
TSC22D3-201ENST00000315660 RALGAPBQ86X10 1494 aa21.68■■□□□ 1.06
TSC22D3-201ENST00000315660 EFCAB2Q5VUJ9 269 aa21.68■■□□□ 1.06
TSC22D3-201ENST00000315660 KDM5CP41229 1560 aa21.65■■□□□ 1.06
TSC22D3-201ENST00000315660 DUOX2Q9NRD8 1548 aa21.65■■□□□ 1.06
TSC22D3-201ENST00000315660 ABCC1P33527 1531 aa21.65■■□□□ 1.06
TSC22D3-201ENST00000315660 PRKRIP1Q9H875 184 aaPredicted RBP21.63■■□□□ 1.05
TSC22D3-201ENST00000315660 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
TSC22D3-201ENST00000315660 BCORL1Q5H9F3 1711 aa21.62■■□□□ 1.05
TSC22D3-201ENST00000315660 IQGAP3Q86VI3 1631 aa21.61■■□□□ 1.05
TSC22D3-201ENST00000315660 ERBINQ96RT1 1412 aa21.61■■□□□ 1.05
TSC22D3-201ENST00000315660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.05
TSC22D3-201ENST00000315660 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
TSC22D3-201ENST00000315660 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
TSC22D3-201ENST00000315660 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms