RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 SOX12O15370 315 aa15.4■□□□□ 0.06
AMBRA1-201ENST00000314845 HSPA5P11021 654 aaKnown RBP15.4■□□□□ 0.06
AMBRA1-201ENST00000314845 STK26Q9P289 416 aa15.39■□□□□ 0.05
AMBRA1-201ENST00000314845 ABCC8Q09428 1581 aa15.39■□□□□ 0.05
AMBRA1-201ENST00000314845 MPHOSPH9Q99550 1183 aa15.39■□□□□ 0.05
AMBRA1-201ENST00000314845 TRIM44Q96DX7 344 aaPredicted RBP15.38■□□□□ 0.05
AMBRA1-201ENST00000314845 RTF1Q92541 710 aaKnown RBP15.37■□□□□ 0.05
AMBRA1-201ENST00000314845 KTN1Q86UP2 1357 aaKnown RBP15.36■□□□□ 0.05
AMBRA1-201ENST00000314845 KIF3BO15066 747 aa15.36■□□□□ 0.05
AMBRA1-201ENST00000314845 FOXD1Q16676 465 aa15.35■□□□□ 0.05
AMBRA1-201ENST00000314845 FGD1P98174 961 aa15.34■□□□□ 0.05
AMBRA1-201ENST00000314845 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
AMBRA1-201ENST00000314845 KCNJ4P48050 445 aa15.34■□□□□ 0.05
AMBRA1-201ENST00000314845 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
AMBRA1-201ENST00000314845 ROCK2O75116 1388 aaKnown RBP15.33■□□□□ 0.04
AMBRA1-201ENST00000314845 RAB3GAP2Q9H2M9 1393 aa15.33■□□□□ 0.04
AMBRA1-201ENST00000314845 JPH4Q96JJ6 628 aa15.33■□□□□ 0.04
AMBRA1-201ENST00000314845 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.04
AMBRA1-201ENST00000314845 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
AMBRA1-201ENST00000314845 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
AMBRA1-201ENST00000314845 IPO8O15397 1037 aaKnown RBP15.31■□□□□ 0.04
AMBRA1-201ENST00000314845 RALBP1Q15311 655 aa15.31■□□□□ 0.04
AMBRA1-201ENST00000314845 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
AMBRA1-201ENST00000314845 EIF3AQ14152 1382 aaKnown RBP15.3■□□□□ 0.04
AMBRA1-201ENST00000314845 CCDC18Q5T9S5 1454 aa15.3■□□□□ 0.04
AMBRA1-201ENST00000314845 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
AMBRA1-201ENST00000314845 U2AF1L5P0DN76 240 aaPredicted RBP15.29■□□□□ 0.04
AMBRA1-201ENST00000314845 U2AF1Q01081 240 aaKnown RBP eCLIP15.29■□□□□ 0.04
AMBRA1-201ENST00000314845 PTMAP06454 111 aaKnown RBP15.29■□□□□ 0.04
AMBRA1-201ENST00000314845 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.046e-8■■■■□ 25.5
AMBRA1-201ENST00000314845 PAK3O75914 559 aaPredicted RBP15.28■□□□□ 0.04
AMBRA1-201ENST00000314845 EID1Q9Y6B2 187 aa15.28■□□□□ 0.04
AMBRA1-201ENST00000314845 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.04
AMBRA1-201ENST00000314845 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
AMBRA1-201ENST00000314845 HSP90AB1P08238 724 aaKnown RBP15.27■□□□□ 0.03
AMBRA1-201ENST00000314845 B4GALNT3Q6L9W6 998 aa15.27■□□□□ 0.03
AMBRA1-201ENST00000314845 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.03
AMBRA1-201ENST00000314845 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
AMBRA1-201ENST00000314845 CSB-PGBD3P0DP91 1061 aa15.25■□□□□ 0.03
AMBRA1-201ENST00000314845 MCCP23508 829 aa15.24■□□□□ 0.03
AMBRA1-201ENST00000314845 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
AMBRA1-201ENST00000314845 NAP1L2Q9ULW6 460 aaPredicted RBP15.22■□□□□ 0.03
AMBRA1-201ENST00000314845 TPRNQ4KMQ1 711 aa15.21■□□□□ 0.03
AMBRA1-201ENST00000314845 HSCBQ8IWL3 235 aa15.21■□□□□ 0.03
AMBRA1-201ENST00000314845 WIZO95785 1651 aa15.2■□□□□ 0.02
AMBRA1-201ENST00000314845 ERICH6BQ5W0A0 696 aa15.19■□□□□ 0.02
AMBRA1-201ENST00000314845 GOLGA6L4A6NEF3 574 aa15.19■□□□□ 0.02
AMBRA1-201ENST00000314845 NGDNQ8NEJ9 315 aaKnown RBP15.18■□□□□ 0.02
AMBRA1-201ENST00000314845 RCAN3Q9UKA8 241 aa15.18■□□□□ 0.02
AMBRA1-201ENST00000314845 STK31Q9BXU1 1019 aa15.18■□□□□ 0.02
AMBRA1-201ENST00000314845 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
AMBRA1-201ENST00000314845 HDAC5Q9UQL6 1122 aa15.18■□□□□ 0.02
AMBRA1-201ENST00000314845 NLRP13Q86W25 1043 aa15.17■□□□□ 0.02
AMBRA1-201ENST00000314845 NOP58Q9Y2X3 529 aaKnown RBP15.17■□□□□ 0.02
AMBRA1-201ENST00000314845 PTPRGP23470 1445 aa15.17■□□□□ 0.02
AMBRA1-201ENST00000314845 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
AMBRA1-201ENST00000314845 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
AMBRA1-201ENST00000314845 DNTTIP2Q5QJE6 756 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-201ENST00000314845 NRDCO43847 1150 aa15.16■□□□□ 0.02
AMBRA1-201ENST00000314845 KIAA1211Q6ZU35 1233 aa15.15■□□□□ 0.02
AMBRA1-201ENST00000314845 GOLGA6L6A8MZA4 724 aa15.15■□□□□ 0.02
AMBRA1-201ENST00000314845 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
AMBRA1-201ENST00000314845 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
AMBRA1-201ENST00000314845 TULP1O00294 542 aaPredicted RBP15.14■□□□□ 0.01
AMBRA1-201ENST00000314845 ITPRIPQ8IWB1 547 aa15.13■□□□□ 0.01
AMBRA1-201ENST00000314845 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
AMBRA1-201ENST00000314845 APBB1O00213 710 aa15.12■□□□□ 0.01
AMBRA1-201ENST00000314845 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
AMBRA1-201ENST00000314845 UACAQ9BZF9 1416 aa15.12■□□□□ 0.01
AMBRA1-201ENST00000314845 AMPHP49418 695 aa15.11■□□□□ 0.01
AMBRA1-201ENST00000314845 VGFO15240 615 aaPredicted RBP15.11■□□□□ 0.01
AMBRA1-201ENST00000314845 TRAK1Q9UPV9 953 aa15.11■□□□□ 0.01
AMBRA1-201ENST00000314845 PDE3BQ13370 1112 aa15.11■□□□□ 0.01
AMBRA1-201ENST00000314845 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
AMBRA1-201ENST00000314845 PHLDB1Q86UU1 1377 aa15.1■□□□□ 0.01
AMBRA1-201ENST00000314845 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
AMBRA1-201ENST00000314845 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
AMBRA1-201ENST00000314845 SMC4Q9NTJ3 1288 aa15.1■□□□□ 0.01
AMBRA1-201ENST00000314845 HMMRO75330 724 aa15.09■□□□□ 0.01
AMBRA1-201ENST00000314845 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0.01
AMBRA1-201ENST00000314845 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0.01
AMBRA1-201ENST00000314845 CYB5RLQ6IPT4 315 aa15.07■□□□□ 0
AMBRA1-201ENST00000314845 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
AMBRA1-201ENST00000314845 ST20-MTHFSA0A0A6YYL1 179 aa15.06■□□□□ 0
AMBRA1-201ENST00000314845 TMX4Q9H1E5 349 aaPredicted RBP15.06■□□□□ 0
AMBRA1-201ENST00000314845 TCERG1O14776 1098 aaKnown RBP15.05■□□□□ 0
AMBRA1-201ENST00000314845 GORABQ5T7V8 394 aa15.05■□□□□ 0
AMBRA1-201ENST00000314845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ 02e-7■■■□□ 18.3
AMBRA1-201ENST00000314845 KIF15Q9NS87 1388 aa15.05■□□□□ -0
AMBRA1-201ENST00000314845 GPATCH3Q96I76 525 aa15.04■□□□□ -0
AMBRA1-201ENST00000314845 NUTM2FA1L443 756 aa15.04■□□□□ -0
AMBRA1-201ENST00000314845 GNL2Q13823 731 aaKnown RBP15.04■□□□□ -0
AMBRA1-201ENST00000314845 CENPJQ9HC77 1338 aaPredicted RBP15.04■□□□□ -0
AMBRA1-201ENST00000314845 TAF7LQ5H9L4 462 aa15.04■□□□□ -0
AMBRA1-201ENST00000314845 EVC2Q86UK5 1308 aa15.03■□□□□ -0
AMBRA1-201ENST00000314845 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
AMBRA1-201ENST00000314845 CCDC146Q8IYE0 955 aa15.02□□□□□ -0.01
AMBRA1-201ENST00000314845 CHMP3Q9Y3E7 222 aa15.01□□□□□ -0.01
AMBRA1-201ENST00000314845 MYBBP1AQ9BQG0 1328 aaKnown RBP15.01□□□□□ -0.01
AMBRA1-201ENST00000314845 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms