RNA–Protein interactions for RNA: ENST00000311601.5

SH3PXD2B-201, Transcript of SH3 and PX domains 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3PXD2B, Length 7,777 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-201ENST00000311601 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
SH3PXD2B-201ENST00000311601 BECN1Q14457 450 aa17.43■□□□□ 0.38
SH3PXD2B-201ENST00000311601 WASHC2CQ9Y4E1 1318 aa17.43■□□□□ 0.38
SH3PXD2B-201ENST00000311601 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
SH3PXD2B-201ENST00000311601 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
SH3PXD2B-201ENST00000311601 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
SH3PXD2B-201ENST00000311601 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
SH3PXD2B-201ENST00000311601 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
SH3PXD2B-201ENST00000311601 JPH4Q96JJ6 628 aa17.38■□□□□ 0.37
SH3PXD2B-201ENST00000311601 SPAG9O60271 1321 aaKnown RBP17.38■□□□□ 0.37
SH3PXD2B-201ENST00000311601 NUP155O75694 1391 aa17.37■□□□□ 0.37
SH3PXD2B-201ENST00000311601 RGS3P49796 1198 aa17.37■□□□□ 0.37
SH3PXD2B-201ENST00000311601 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
SH3PXD2B-201ENST00000311601 GOLGA6L22H0YM25 854 aa17.35■□□□□ 0.37
SH3PXD2B-201ENST00000311601 OSCARQ8IYS5 282 aa17.34■□□□□ 0.37
SH3PXD2B-201ENST00000311601 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
SH3PXD2B-201ENST00000311601 LTV1Q96GA3 475 aaPredicted RBP17.34■□□□□ 0.37
SH3PXD2B-201ENST00000311601 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
SH3PXD2B-201ENST00000311601 WIZO95785 1651 aa17.32■□□□□ 0.36
SH3PXD2B-201ENST00000311601 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
SH3PXD2B-201ENST00000311601 APBB1O00213 710 aa17.31■□□□□ 0.36
SH3PXD2B-201ENST00000311601 CLSTN1O94985 981 aa17.31■□□□□ 0.36
SH3PXD2B-201ENST00000311601 MS4A1P11836 297 aa17.31■□□□□ 0.36
SH3PXD2B-201ENST00000311601 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
SH3PXD2B-201ENST00000311601 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
SH3PXD2B-201ENST00000311601 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
SH3PXD2B-201ENST00000311601 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
SH3PXD2B-201ENST00000311601 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
SH3PXD2B-201ENST00000311601 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
SH3PXD2B-201ENST00000311601 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
SH3PXD2B-201ENST00000311601 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
SH3PXD2B-201ENST00000311601 G3V3G9 751 aa17.28■□□□□ 0.36
SH3PXD2B-201ENST00000311601 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
SH3PXD2B-201ENST00000311601 AMPHP49418 695 aa17.27■□□□□ 0.35
SH3PXD2B-201ENST00000311601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.35
SH3PXD2B-201ENST00000311601 MPHOSPH9Q99550 1183 aa17.26■□□□□ 0.35
SH3PXD2B-201ENST00000311601 SETD5Q9C0A6 1442 aa17.26■□□□□ 0.35
SH3PXD2B-201ENST00000311601 EVA1CP58658 441 aa17.25■□□□□ 0.35
SH3PXD2B-201ENST00000311601 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
SH3PXD2B-201ENST00000311601 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
SH3PXD2B-201ENST00000311601 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
SH3PXD2B-201ENST00000311601 MSH5O43196 834 aa17.23■□□□□ 0.35
SH3PXD2B-201ENST00000311601 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
SH3PXD2B-201ENST00000311601 TRAK1Q9UPV9 953 aa17.22■□□□□ 0.35
SH3PXD2B-201ENST00000311601 FAM69CQ0P6D2 419 aa17.22■□□□□ 0.35
SH3PXD2B-201ENST00000311601 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
SH3PXD2B-201ENST00000311601 PLCB2Q00722 1185 aa17.22■□□□□ 0.35
SH3PXD2B-201ENST00000311601 TERF2IPQ9NYB0 399 aa17.22■□□□□ 0.35
SH3PXD2B-201ENST00000311601 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
SH3PXD2B-201ENST00000311601 PTMAP06454 111 aaKnown RBP17.21■□□□□ 0.35
SH3PXD2B-201ENST00000311601 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
SH3PXD2B-201ENST00000311601 GORABQ5T7V8 394 aa17.2■□□□□ 0.34
SH3PXD2B-201ENST00000311601 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
SH3PXD2B-201ENST00000311601 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
SH3PXD2B-201ENST00000311601 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
SH3PXD2B-201ENST00000311601 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
SH3PXD2B-201ENST00000311601 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
SH3PXD2B-201ENST00000311601 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
SH3PXD2B-201ENST00000311601 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
SH3PXD2B-201ENST00000311601 PTPRGP23470 1445 aa17.16■□□□□ 0.34
SH3PXD2B-201ENST00000311601 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
SH3PXD2B-201ENST00000311601 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
SH3PXD2B-201ENST00000311601 RAPGEF2Q9Y4G8 1499 aa17.16■□□□□ 0.34
SH3PXD2B-201ENST00000311601 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
SH3PXD2B-201ENST00000311601 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.34
SH3PXD2B-201ENST00000311601 TOP2AP11388 1531 aaKnown RBP17.14■□□□□ 0.33
SH3PXD2B-201ENST00000311601 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
SH3PXD2B-201ENST00000311601 MCCP23508 829 aa17.13■□□□□ 0.33
SH3PXD2B-201ENST00000311601 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
SH3PXD2B-201ENST00000311601 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
SH3PXD2B-201ENST00000311601 SLC4A10Q6U841 1118 aa17.13■□□□□ 0.33
SH3PXD2B-201ENST00000311601 GOLGA6L4A6NEF3 574 aa17.13■□□□□ 0.33
SH3PXD2B-201ENST00000311601 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
SH3PXD2B-201ENST00000311601 KIAA1211Q6ZU35 1233 aa17.12■□□□□ 0.33
SH3PXD2B-201ENST00000311601 ITPRIPQ8IWB1 547 aa17.12■□□□□ 0.33
SH3PXD2B-201ENST00000311601 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
SH3PXD2B-201ENST00000311601 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
SH3PXD2B-201ENST00000311601 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
SH3PXD2B-201ENST00000311601 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
SH3PXD2B-201ENST00000311601 CCDC146Q8IYE0 955 aa17.09■□□□□ 0.33
SH3PXD2B-201ENST00000311601 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.33
SH3PXD2B-201ENST00000311601 KLHL34Q8N239 644 aa17.08■□□□□ 0.32
SH3PXD2B-201ENST00000311601 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
SH3PXD2B-201ENST00000311601 AMER1Q5JTC6 1135 aaPredicted RBP17.08■□□□□ 0.32
SH3PXD2B-201ENST00000311601 PSME1Q06323 249 aa17.07■□□□□ 0.32
SH3PXD2B-201ENST00000311601 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
SH3PXD2B-201ENST00000311601 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
SH3PXD2B-201ENST00000311601 C1orf141Q5JVX7 400 aa17.05■□□□□ 0.32
SH3PXD2B-201ENST00000311601 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
SH3PXD2B-201ENST00000311601 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
SH3PXD2B-201ENST00000311601 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
SH3PXD2B-201ENST00000311601 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
SH3PXD2B-201ENST00000311601 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
SH3PXD2B-201ENST00000311601 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
SH3PXD2B-201ENST00000311601 TIMELESSQ9UNS1 1208 aa17.03■□□□□ 0.32
SH3PXD2B-201ENST00000311601 COG3Q96JB2 828 aa17.02■□□□□ 0.32
SH3PXD2B-201ENST00000311601 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
SH3PXD2B-201ENST00000311601 ATF3P18847 181 aa17.02■□□□□ 0.31
SH3PXD2B-201ENST00000311601 TRIM6-TRIM34B2RNG4 842 aa17.01■□□□□ 0.31
SH3PXD2B-201ENST00000311601 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms