RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 RWDD1Q9H446 243 aaPredicted RBP24.09■■□□□ 1.45
BPTF-201ENST00000306378 TPRNQ4KMQ1 711 aa24.08■■□□□ 1.45
BPTF-201ENST00000306378 OS9Q13438 667 aaPredicted RBP24.07■■□□□ 1.44
BPTF-201ENST00000306378 CDR1P51861 262 aa24.06■■□□□ 1.44
BPTF-201ENST00000306378 ST18O60284 1047 aa24.06■■□□□ 1.44
BPTF-201ENST00000306378 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
BPTF-201ENST00000306378 TSHZ2Q9NRE2 1034 aa24.06■■□□□ 1.44
BPTF-201ENST00000306378 PMFBP1Q8TBY8 1022 aa24.05■■□□□ 1.44
BPTF-201ENST00000306378 TPM1P09493 284 aa24.04■■□□□ 1.44
BPTF-201ENST00000306378 CHMP4AQ9BY43 222 aa24.04■■□□□ 1.44
BPTF-201ENST00000306378 DCTN1Q14203 1278 aa24.03■■□□□ 1.44
BPTF-201ENST00000306378 TSPY4P0CV99 314 aa24.03■■□□□ 1.44
BPTF-201ENST00000306378 TSPY10P0CW01 314 aa24.03■■□□□ 1.44
BPTF-201ENST00000306378 FAM43AQ8N2R8 423 aa24.02■■□□□ 1.44
BPTF-201ENST00000306378 CCDC191Q8NCU4 936 aa24.02■■□□□ 1.44
BPTF-201ENST00000306378 AK7Q96M32 723 aa24.02■■□□□ 1.44
BPTF-201ENST00000306378 RDXP35241 583 aaKnown RBP24.01■■□□□ 1.43
BPTF-201ENST00000306378 KTN1Q86UP2 1357 aaKnown RBP24.01■■□□□ 1.43
BPTF-201ENST00000306378 TSR1Q2NL82 804 aaKnown RBP24.01■■□□□ 1.43
BPTF-201ENST00000306378 SLKQ9H2G2 1235 aaPredicted RBP24.01■■□□□ 1.43
BPTF-201ENST00000306378 GPATCH3Q96I76 525 aa24■■□□□ 1.43
BPTF-201ENST00000306378 RRP9O43818 475 aaKnown RBP24■■□□□ 1.43
BPTF-201ENST00000306378 HMGN5P82970 282 aaKnown RBP23.99■■□□□ 1.43
BPTF-201ENST00000306378 FRAT1Q92837 279 aaPredicted RBP23.99■■□□□ 1.43
BPTF-201ENST00000306378 TSPYL1Q9H0U9 437 aa23.98■■□□□ 1.43
BPTF-201ENST00000306378 HSP90B2PQ58FF3 399 aa23.97■■□□□ 1.43
BPTF-201ENST00000306378 DIAPH3Q9NSV4 1193 aa23.97■■□□□ 1.43
BPTF-201ENST00000306378 HSP90B1P14625 803 aaKnown RBP23.97■■□□□ 1.43
BPTF-201ENST00000306378 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
BPTF-201ENST00000306378 NAP1L2Q9ULW6 460 aaPredicted RBP23.95■■□□□ 1.42
BPTF-201ENST00000306378 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
BPTF-201ENST00000306378 GOLGA6L19H0YKK7 550 aa23.93■■□□□ 1.42
BPTF-201ENST00000306378 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
BPTF-201ENST00000306378 USP8P40818 1118 aa23.93■■□□□ 1.42
BPTF-201ENST00000306378 RCAN3Q9UKA8 241 aa23.93■■□□□ 1.42
BPTF-201ENST00000306378 HDAC5Q9UQL6 1122 aa23.92■■□□□ 1.42
BPTF-201ENST00000306378 PDE3BQ13370 1112 aa23.91■■□□□ 1.42
BPTF-201ENST00000306378 DHX8Q14562 1220 aaKnown RBP23.9■■□□□ 1.42
BPTF-201ENST00000306378 FAM13BQ9NYF5 915 aa23.9■■□□□ 1.42
BPTF-201ENST00000306378 GOLGA2Q08379 1002 aa23.9■■□□□ 1.42
BPTF-201ENST00000306378 RALBP1Q15311 655 aa23.9■■□□□ 1.42
BPTF-201ENST00000306378 CEP89Q96ST8 783 aa23.89■■□□□ 1.42
BPTF-201ENST00000306378 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
BPTF-201ENST00000306378 KDM2AQ9Y2K7 1162 aa23.88■■□□□ 1.41
BPTF-201ENST00000306378 ISY1Q9ULR0 285 aaKnown RBP23.88■■□□□ 1.41
BPTF-201ENST00000306378 IPO7O95373 1038 aaKnown RBP23.87■■□□□ 1.41
BPTF-201ENST00000306378 RUFY1Q96T51 708 aa23.87■■□□□ 1.41
BPTF-201ENST00000306378 CARD11Q9BXL7 1154 aa23.86■■□□□ 1.41
BPTF-201ENST00000306378 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
BPTF-201ENST00000306378 STK11IPQ8N1F8 1099 aa23.85■■□□□ 1.41
BPTF-201ENST00000306378 SPRYD3Q8NCJ5 442 aa23.85■■□□□ 1.41
BPTF-201ENST00000306378 ERCC4Q92889 916 aaPredicted RBP23.85■■□□□ 1.41
BPTF-201ENST00000306378 CCDC39Q9UFE4 941 aa23.84■■□□□ 1.41
BPTF-201ENST00000306378 INCENPQ9NQS7 918 aa23.84■■□□□ 1.41
BPTF-201ENST00000306378 CCP110O43303 1012 aa23.83■■□□□ 1.41
BPTF-201ENST00000306378 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.41
BPTF-201ENST00000306378 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.4
BPTF-201ENST00000306378 EIF3AQ14152 1382 aaKnown RBP23.83■■□□□ 1.4
BPTF-201ENST00000306378 CLSTN1O94985 981 aa23.83■■□□□ 1.4
BPTF-201ENST00000306378 CENPQQ7L2Z9 268 aaPredicted RBP23.81■■□□□ 1.4
BPTF-201ENST00000306378 P3H3Q8IVL6 736 aa23.81■■□□□ 1.4
BPTF-201ENST00000306378 H0YHG0 523 aa23.81■■□□□ 1.4
BPTF-201ENST00000306378 CAGE1Q8TC20 777 aa23.8■■□□□ 1.4
BPTF-201ENST00000306378 FAM161AQ3B820 660 aa23.8■■□□□ 1.4
BPTF-201ENST00000306378 HOOK1Q9UJC3 728 aaKnown RBP23.8■■□□□ 1.4
BPTF-201ENST00000306378 CAVIN1Q6NZI2 390 aaKnown RBP23.79■■□□□ 1.4
BPTF-201ENST00000306378 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
BPTF-201ENST00000306378 ANKRD20A12PQ8NF67 263 aa23.78■■□□□ 1.4
BPTF-201ENST00000306378 LEKR1Q6ZMV7 388 aa23.78■■□□□ 1.4
BPTF-201ENST00000306378 PRKCSHP14314 528 aaPredicted RBP23.78■■□□□ 1.4
BPTF-201ENST00000306378 MYO6Q9UM54 1294 aa23.77■■□□□ 1.4
BPTF-201ENST00000306378 BECN2A8MW95 431 aa23.76■■□□□ 1.39
BPTF-201ENST00000306378 GOLGA6L7A0A1B0GV03 622 aa23.75■■□□□ 1.39
BPTF-201ENST00000306378 DDX49Q9Y6V7 483 aaKnown RBP23.75■■□□□ 1.39
BPTF-201ENST00000306378 MRE11P49959 708 aa23.74■■□□□ 1.39
BPTF-201ENST00000306378 TMF1P82094 1093 aa23.74■■□□□ 1.39
BPTF-201ENST00000306378 ZRSR2Q15696 482 aaKnown RBP23.74■■□□□ 1.39
BPTF-201ENST00000306378 DEF6Q9H4E7 631 aa23.74■■□□□ 1.39
BPTF-201ENST00000306378 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
BPTF-201ENST00000306378 FBLN2P98095 1184 aa23.73■■□□□ 1.39
BPTF-201ENST00000306378 AAMPQ13685 434 aa23.72■■□□□ 1.39
BPTF-201ENST00000306378 CHIC2Q9UKJ5 165 aa23.72■■□□□ 1.39
BPTF-201ENST00000306378 CCAR2Q8N163 923 aaKnown RBP23.71■■□□□ 1.39
BPTF-201ENST00000306378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.71■■□□□ 1.393e-7■■■□□ 15.4
BPTF-201ENST00000306378 KAT6BQ8WYB5 2073 aa23.71■■□□□ 1.39
BPTF-201ENST00000306378 ARHGAP35Q9NRY4 1499 aa23.7■■□□□ 1.39
BPTF-201ENST00000306378 TULP1O00294 542 aaPredicted RBP23.7■■□□□ 1.38
BPTF-201ENST00000306378 NAT10Q9H0A0 1025 aaKnown RBP23.7■■□□□ 1.38
BPTF-201ENST00000306378 NEFHP12036 1026 aa23.69■■□□□ 1.38
BPTF-201ENST00000306378 HIRIP3Q9BW71 556 aaPredicted RBP23.69■■□□□ 1.38
BPTF-201ENST00000306378 PES1O00541 588 aaKnown RBP23.69■■□□□ 1.38
BPTF-201ENST00000306378 NEXNQ0ZGT2 675 aa23.68■■□□□ 1.38
BPTF-201ENST00000306378 ZBED9Q6R2W3 1325 aa23.68■■□□□ 1.38
BPTF-201ENST00000306378 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
BPTF-201ENST00000306378 ZBTB7CA1YPR0 619 aa23.67■■□□□ 1.38
BPTF-201ENST00000306378 NASPP49321 788 aaPredicted RBP23.67■■□□□ 1.38
BPTF-201ENST00000306378 MFAP1P55081 439 aaKnown RBP23.66■■□□□ 1.38
BPTF-201ENST00000306378 MNS1Q8NEH6 495 aa23.66■■□□□ 1.38
BPTF-201ENST00000306378 REC8O95072 547 aa23.65■■□□□ 1.38
BPTF-201ENST00000306378 LETM1O95202 739 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms