RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 OS9Q13438 667 aaPredicted RBP17.03■□□□□ 0.32
ABR-202ENST00000302538 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.32
ABR-202ENST00000302538 CC2D1BQ5T0F9 858 aaKnown RBP17.02■□□□□ 0.32
ABR-202ENST00000302538 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
ABR-202ENST00000302538 TMF1P82094 1093 aa17.02■□□□□ 0.31
ABR-202ENST00000302538 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.31
ABR-202ENST00000302538 MRC2Q9UBG0 1479 aa17.01■□□□□ 0.31
ABR-202ENST00000302538 IRX6P78412 446 aaPredicted RBP16.99■□□□□ 0.31
ABR-202ENST00000302538 KIF3BO15066 747 aa16.98■□□□□ 0.31
ABR-202ENST00000302538 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
ABR-202ENST00000302538 CASC1Q6TDU7 716 aa16.97■□□□□ 0.31
ABR-202ENST00000302538 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
ABR-202ENST00000302538 TAOK2Q9UL54 1235 aa16.96■□□□□ 0.31
ABR-202ENST00000302538 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
ABR-202ENST00000302538 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.3
ABR-202ENST00000302538 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
ABR-202ENST00000302538 CCDC18Q5T9S5 1454 aa16.95■□□□□ 0.3
ABR-202ENST00000302538 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
ABR-202ENST00000302538 RSPH4AQ5TD94 716 aa16.94■□□□□ 0.3
ABR-202ENST00000302538 WASHC2CQ9Y4E1 1318 aa16.93■□□□□ 0.3
ABR-202ENST00000302538 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
ABR-202ENST00000302538 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
ABR-202ENST00000302538 PKD2Q13563 968 aa16.92■□□□□ 0.3
ABR-202ENST00000302538 NCLP19338 710 aaKnown RBP16.92■□□□□ 0.3
ABR-202ENST00000302538 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
ABR-202ENST00000302538 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
ABR-202ENST00000302538 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
ABR-202ENST00000302538 SPAG9O60271 1321 aaKnown RBP16.9■□□□□ 0.3
ABR-202ENST00000302538 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.29
ABR-202ENST00000302538 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
ABR-202ENST00000302538 SETD5Q9C0A6 1442 aa16.89■□□□□ 0.29
ABR-202ENST00000302538 NUTM2DQ5VT03 806 aaPredicted RBP16.89■□□□□ 0.29
ABR-202ENST00000302538 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
ABR-202ENST00000302538 FGD1P98174 961 aa16.88■□□□□ 0.29
ABR-202ENST00000302538 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
ABR-202ENST00000302538 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
ABR-202ENST00000302538 KCNJ4P48050 445 aa16.85■□□□□ 0.29
ABR-202ENST00000302538 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
ABR-202ENST00000302538 NUP155O75694 1391 aa16.84■□□□□ 0.29
ABR-202ENST00000302538 MIER1Q8N108 512 aa16.84■□□□□ 0.29
ABR-202ENST00000302538 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.29
ABR-202ENST00000302538 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
ABR-202ENST00000302538 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
ABR-202ENST00000302538 MS4A1P11836 297 aa16.82■□□□□ 0.28
ABR-202ENST00000302538 BECN1Q14457 450 aa16.82■□□□□ 0.28
ABR-202ENST00000302538 LAMC3Q9Y6N6 1575 aa16.82■□□□□ 0.28
ABR-202ENST00000302538 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
ABR-202ENST00000302538 FOXD1Q16676 465 aa16.81■□□□□ 0.28
ABR-202ENST00000302538 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
ABR-202ENST00000302538 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
ABR-202ENST00000302538 CUX1P39880 1505 aa16.79■□□□□ 0.28
ABR-202ENST00000302538 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
ABR-202ENST00000302538 MEX3CQ5U5Q3 659 aaKnown RBP16.78■□□□□ 0.28
ABR-202ENST00000302538 GOLGA6L22H0YM25 854 aa16.77■□□□□ 0.28
ABR-202ENST00000302538 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
ABR-202ENST00000302538 G3V3G9 751 aa16.76■□□□□ 0.27
ABR-202ENST00000302538 DCAF8Q5TAQ9 597 aa16.76■□□□□ 0.27
ABR-202ENST00000302538 MPHOSPH9Q99550 1183 aa16.76■□□□□ 0.27
ABR-202ENST00000302538 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
ABR-202ENST00000302538 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
ABR-202ENST00000302538 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
ABR-202ENST00000302538 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
ABR-202ENST00000302538 AMPHP49418 695 aa16.74■□□□□ 0.27
ABR-202ENST00000302538 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
ABR-202ENST00000302538 TERF2IPQ9NYB0 399 aa16.74■□□□□ 0.27
ABR-202ENST00000302538 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
ABR-202ENST00000302538 EVA1CP58658 441 aa16.73■□□□□ 0.27
ABR-202ENST00000302538 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
ABR-202ENST00000302538 PRG4Q92954 1404 aaPredicted RBP16.72■□□□□ 0.27
ABR-202ENST00000302538 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
ABR-202ENST00000302538 MSH5O43196 834 aa16.72■□□□□ 0.27
ABR-202ENST00000302538 CLSTN1O94985 981 aa16.72■□□□□ 0.27
ABR-202ENST00000302538 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
ABR-202ENST00000302538 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
ABR-202ENST00000302538 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.27
ABR-202ENST00000302538 RGS3P49796 1198 aa16.71■□□□□ 0.27
ABR-202ENST00000302538 NBR1Q14596 966 aa16.71■□□□□ 0.27
ABR-202ENST00000302538 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
ABR-202ENST00000302538 KIF21BO75037 1637 aa16.7■□□□□ 0.26
ABR-202ENST00000302538 CALD1Q05682 793 aaKnown RBP16.69■□□□□ 0.26
ABR-202ENST00000302538 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
ABR-202ENST00000302538 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
ABR-202ENST00000302538 TAF7LQ5H9L4 462 aa16.68■□□□□ 0.26
ABR-202ENST00000302538 DDRGK1Q96HY6 314 aa16.68■□□□□ 0.26
ABR-202ENST00000302538 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
ABR-202ENST00000302538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.26
ABR-202ENST00000302538 APBB1O00213 710 aa16.66■□□□□ 0.26
ABR-202ENST00000302538 GORABQ5T7V8 394 aa16.66■□□□□ 0.26
ABR-202ENST00000302538 STK31Q9BXU1 1019 aa16.65■□□□□ 0.26
ABR-202ENST00000302538 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
ABR-202ENST00000302538 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
ABR-202ENST00000302538 KTN1Q86UP2 1357 aaKnown RBP16.64■□□□□ 0.25
ABR-202ENST00000302538 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
ABR-202ENST00000302538 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
ABR-202ENST00000302538 SUPT16HQ9Y5B9 1047 aaKnown RBP16.64■□□□□ 0.25
ABR-202ENST00000302538 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
ABR-202ENST00000302538 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
ABR-202ENST00000302538 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
ABR-202ENST00000302538 SYNJ2O15056 1496 aa16.62■□□□□ 0.25
ABR-202ENST00000302538 PRDM2Q13029 1718 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms