RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 CDC42BPBQ9Y5S2 1711 aa26.55■■□□□ 1.84
RECQL4-201ENST00000301323 ARHGAP5Q13017 1502 aa26.55■■□□□ 1.84
RECQL4-201ENST00000301323 SCAPERQ9BY12 1400 aa26.52■■□□□ 1.84
RECQL4-201ENST00000301323 ZFYVE16Q7Z3T8 1539 aa26.5■■□□□ 1.83
RECQL4-201ENST00000301323 CDC42BPAQ5VT25 1732 aa26.5■■□□□ 1.83
RECQL4-201ENST00000301323 MAGI2Q86UL8 1455 aa26.49■■□□□ 1.83
RECQL4-201ENST00000301323 EFCAB2Q5VUJ9 269 aa26.48■■□□□ 1.83
RECQL4-201ENST00000301323 ADAMTSL3P82987 1691 aa26.47■■□□□ 1.83
RECQL4-201ENST00000301323 YEATS2Q9ULM3 1422 aa26.47■■□□□ 1.83
RECQL4-201ENST00000301323 KDM5CP41229 1560 aa26.46■■□□□ 1.83
RECQL4-201ENST00000301323 BCORL1Q5H9F3 1711 aa26.45■■□□□ 1.83
RECQL4-201ENST00000301323 ABCC1P33527 1531 aa26.45■■□□□ 1.83
RECQL4-201ENST00000301323 SIGLEC1Q9BZZ2 1709 aa26.45■■□□□ 1.82
RECQL4-201ENST00000301323 ZNF518AQ6AHZ1 1483 aa26.43■■□□□ 1.82
RECQL4-201ENST00000301323 ITSN2Q9NZM3 1697 aa26.41■■□□□ 1.82
RECQL4-201ENST00000301323 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
RECQL4-201ENST00000301323 EHBP1L1Q8N3D4 1523 aa26.4■■□□□ 1.82
RECQL4-201ENST00000301323 GPATCH8Q9UKJ3 1502 aaKnown RBP26.39■■□□□ 1.81
RECQL4-201ENST00000301323 MADDQ8WXG6 1647 aa26.38■■□□□ 1.81
RECQL4-201ENST00000301323 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
RECQL4-201ENST00000301323 HECW2Q9P2P5 1572 aa26.37■■□□□ 1.81
RECQL4-201ENST00000301323 SAMD9LQ8IVG5 1584 aa26.37■■□□□ 1.81
RECQL4-201ENST00000301323 MTUS2Q5JR59 1369 aa26.36■■□□□ 1.81
RECQL4-201ENST00000301323 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
RECQL4-201ENST00000301323 TIAM1Q13009 1591 aa26.33■■□□□ 1.8
RECQL4-201ENST00000301323 TRAPPC8Q9Y2L5 1435 aa26.32■■□□□ 1.8
RECQL4-201ENST00000301323 DIP2CQ9Y2E4 1556 aa26.32■■□□□ 1.8
RECQL4-201ENST00000301323 PTPRMP28827 1452 aa26.31■■□□□ 1.8
RECQL4-201ENST00000301323 ABCA6Q8N139 1617 aa26.31■■□□□ 1.8
RECQL4-201ENST00000301323 C9orf84Q5VXU9 1444 aa26.31■■□□□ 1.8
RECQL4-201ENST00000301323 ATP10AO60312 1499 aa26.3■■□□□ 1.8
RECQL4-201ENST00000301323 SYCP2Q9BX26 1530 aa26.3■■□□□ 1.8
RECQL4-201ENST00000301323 ARID4BQ4LE39 1312 aaPredicted RBP26.3■■□□□ 1.8
RECQL4-201ENST00000301323 MLH3Q9UHC1 1453 aa26.3■■□□□ 1.8
RECQL4-201ENST00000301323 AFAP1Q8N556 730 aa26.29■■□□□ 1.8
RECQL4-201ENST00000301323 CCNB3Q8WWL7 1395 aa26.28■■□□□ 1.8
RECQL4-201ENST00000301323 REREQ9P2R6 1566 aa26.28■■□□□ 1.8
RECQL4-201ENST00000301323 RIMS1Q86UR5 1692 aaKnown RBP26.27■■□□□ 1.8
RECQL4-201ENST00000301323 KIDINS220Q9ULH0 1771 aa26.24■■□□□ 1.79
RECQL4-201ENST00000301323 SUPT6HQ7KZ85 1726 aaKnown RBP26.23■■□□□ 1.79
RECQL4-201ENST00000301323 PLEKHH2Q8IVE3 1493 aa26.22■■□□□ 1.79
RECQL4-201ENST00000301323 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
RECQL4-201ENST00000301323 FER1L4A9Z1Z3 1794 aa26.21■■□□□ 1.79
RECQL4-201ENST00000301323 NCOA2Q15596 1464 aa26.2■■□□□ 1.78
RECQL4-201ENST00000301323 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
RECQL4-201ENST00000301323 INO80Q9ULG1 1556 aaPredicted RBP26.19■■□□□ 1.78
RECQL4-201ENST00000301323 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
RECQL4-201ENST00000301323 ZNF777Q9ULD5 760 aaPredicted RBP26.18■■□□□ 1.78
RECQL4-201ENST00000301323 LRRC9Q6ZRR7 1453 aa26.17■■□□□ 1.78
RECQL4-201ENST00000301323 AGLP35573 1532 aa26.15■■□□□ 1.78
RECQL4-201ENST00000301323 ATP7AQ04656 1500 aa26.14■■□□□ 1.78
RECQL4-201ENST00000301323 ILDR1Q86SU0 546 aaPredicted RBP26.13■■□□□ 1.77
RECQL4-201ENST00000301323 MBD5Q9P267 1494 aa26.11■■□□□ 1.77
RECQL4-201ENST00000301323 HNRNPMP52272 730 aaKnown RBP eCLIP26.1■■□□□ 1.77
RECQL4-201ENST00000301323 MLECQ14165 292 aa26.1■■□□□ 1.77
RECQL4-201ENST00000301323 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
RECQL4-201ENST00000301323 ZNF644Q9H582 1327 aaPredicted RBP26.09■■□□□ 1.77
RECQL4-201ENST00000301323 PLXNC1O60486 1568 aa26.08■■□□□ 1.77
RECQL4-201ENST00000301323 CAMSAP2Q08AD1 1489 aa26.08■■□□□ 1.77
RECQL4-201ENST00000301323 SPAG9O60271 1321 aaKnown RBP26.07■■□□□ 1.76
RECQL4-201ENST00000301323 LMTK3Q96Q04 1460 aa26.05■■□□□ 1.76
RECQL4-201ENST00000301323 KANK4Q5T7N3 995 aaPredicted RBP26.02■■□□□ 1.76
RECQL4-201ENST00000301323 CCDC141Q6ZP82 1450 aa26.01■■□□□ 1.75
RECQL4-201ENST00000301323 ADGBQ8N7X0 1667 aa26■■□□□ 1.75
RECQL4-201ENST00000301323 ARHGEF5Q12774 1597 aa25.99■■□□□ 1.75
RECQL4-201ENST00000301323 A2MP01023 1474 aa25.98■■□□□ 1.75
RECQL4-201ENST00000301323 RTEL1-TNFRSF6BF6WH68 1400 aa25.97■■□□□ 1.75
RECQL4-201ENST00000301323 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
RECQL4-201ENST00000301323 C3P01024 1663 aa25.94■■□□□ 1.74
RECQL4-201ENST00000301323 PLPPR3Q6T4P5 718 aa25.94■■□□□ 1.74
RECQL4-201ENST00000301323 PREX1Q8TCU6 1659 aa25.93■■□□□ 1.74
RECQL4-201ENST00000301323 MIA2Q96PC5 1412 aa25.91■■□□□ 1.74
RECQL4-201ENST00000301323 MROH2AA6NES4 1674 aa25.91■■□□□ 1.74
RECQL4-201ENST00000301323 CNTLNQ9NXG0 1405 aa25.89■■□□□ 1.74
RECQL4-201ENST00000301323 MAST1Q9Y2H9 1570 aa25.87■■□□□ 1.73
RECQL4-201ENST00000301323 CEBPAP49715 358 aaPredicted RBP25.87■■□□□ 1.73
RECQL4-201ENST00000301323 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
RECQL4-201ENST00000301323 CLTCQ00610 1675 aaKnown RBP25.83■■□□□ 1.73
RECQL4-201ENST00000301323 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
RECQL4-201ENST00000301323 APLP2Q06481 763 aa25.82■■□□□ 1.72
RECQL4-201ENST00000301323 PTPN23Q9H3S7 1636 aa25.81■■□□□ 1.72
RECQL4-201ENST00000301323 CROCC2H7BZ55 1655 aa25.8■■□□□ 1.72
RECQL4-201ENST00000301323 HSPA2P54652 639 aa25.79■■□□□ 1.72
RECQL4-201ENST00000301323 ESF1Q9H501 851 aaKnown RBP25.79■■□□□ 1.72
RECQL4-201ENST00000301323 SETD1BQ9UPS6 1966 aaKnown RBP25.77■■□□□ 1.72
RECQL4-201ENST00000301323 UHRF1BP1Q6BDS2 1440 aa25.77■■□□□ 1.72
RECQL4-201ENST00000301323 FGD6Q6ZV73 1430 aa25.77■■□□□ 1.72
RECQL4-201ENST00000301323 TCOF1Q13428 1488 aaKnown RBP25.76■■□□□ 1.71
RECQL4-201ENST00000301323 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
RECQL4-201ENST00000301323 SHANK2Q9UPX8 1470 aa25.75■■□□□ 1.71
RECQL4-201ENST00000301323 NPATQ14207 1427 aa25.75■■□□□ 1.71
RECQL4-201ENST00000301323 ZMYM3Q14202 1370 aa25.73■■□□□ 1.71
RECQL4-201ENST00000301323 DNMT1P26358 1616 aaKnown RBP25.73■■□□□ 1.71
RECQL4-201ENST00000301323 TSPY4P0CV99 314 aa25.72■■□□□ 1.71
RECQL4-201ENST00000301323 TSPY10P0CW01 314 aa25.72■■□□□ 1.71
RECQL4-201ENST00000301323 GGT6Q6P531 493 aa25.72■■□□□ 1.71
RECQL4-201ENST00000301323 RNF17Q9BXT8 1623 aaKnown RBP25.72■■□□□ 1.71
RECQL4-201ENST00000301323 EIF2AK4Q9P2K8 1649 aaKnown RBP25.71■■□□□ 1.71
RECQL4-201ENST00000301323 KDM5DQ9BY66 1539 aa25.71■■□□□ 1.71
RECQL4-201ENST00000301323 PPP6R1Q9UPN7 881 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms