RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
SNRPD1-201ENST00000300413 MPHOSPH9Q99550 1183 aa11.33□□□□□ -0.6
SNRPD1-201ENST00000300413 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNRPD1-201ENST00000300413 EPRSP07814 1512 aaKnown RBP11.32□□□□□ -0.6
SNRPD1-201ENST00000300413 THOC2Q8NI27 1593 aaKnown RBP11.31□□□□□ -0.6
SNRPD1-201ENST00000300413 ARHGAP5Q13017 1502 aa11.31□□□□□ -0.6
SNRPD1-201ENST00000300413 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
SNRPD1-201ENST00000300413 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
SNRPD1-201ENST00000300413 SUPT6HQ7KZ85 1726 aaKnown RBP11.3□□□□□ -0.6
SNRPD1-201ENST00000300413 WASHC2CQ9Y4E1 1318 aa11.29□□□□□ -0.6
SNRPD1-201ENST00000300413 RRBP1Q9P2E9 1410 aaKnown RBP11.29□□□□□ -0.6
SNRPD1-201ENST00000300413 UGGT2Q9NYU1 1516 aa11.28□□□□□ -0.6
SNRPD1-201ENST00000300413 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
SNRPD1-201ENST00000300413 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
SNRPD1-201ENST00000300413 MLECQ14165 292 aa11.27□□□□□ -0.6
SNRPD1-201ENST00000300413 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.61
SNRPD1-201ENST00000300413 KIF15Q9NS87 1388 aa11.26□□□□□ -0.61
SNRPD1-201ENST00000300413 CTTNBP2Q8WZ74 1663 aa11.26□□□□□ -0.61
SNRPD1-201ENST00000300413 NUP160Q12769 1436 aa11.25□□□□□ -0.61
SNRPD1-201ENST00000300413 DCAF11Q8TEB1 546 aa11.25□□□□□ -0.61
SNRPD1-201ENST00000300413 PCF11O94913 1555 aaKnown RBP11.25□□□□□ -0.61
SNRPD1-201ENST00000300413 POGKQ9P215 609 aa11.24□□□□□ -0.61
SNRPD1-201ENST00000300413 KIF14Q15058 1648 aa11.24□□□□□ -0.61
SNRPD1-201ENST00000300413 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
SNRPD1-201ENST00000300413 SIN3AQ96ST3 1273 aa11.24□□□□□ -0.61
SNRPD1-201ENST00000300413 EIF3AQ14152 1382 aaKnown RBP11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 PLB1Q6P1J6 1458 aa11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 PHF23Q9BUL5 403 aaPredicted RBP11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 PBRM1Q86U86 1689 aa11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 C14orf37Q86TY3 774 aa11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 CCDC144AA2RUR9 1427 aa11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 ANKRD50Q9ULJ7 1429 aa11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 TMF1P82094 1093 aa11.23□□□□□ -0.61
SNRPD1-201ENST00000300413 EID1Q9Y6B2 187 aa11.22□□□□□ -0.61
SNRPD1-201ENST00000300413 TMC1Q8TDI8 760 aa11.21□□□□□ -0.62
SNRPD1-201ENST00000300413 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.62
SNRPD1-201ENST00000300413 ROCK1Q13464 1354 aa11.19□□□□□ -0.62
SNRPD1-201ENST00000300413 C9orf84Q5VXU9 1444 aa11.19□□□□□ -0.62
SNRPD1-201ENST00000300413 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
SNRPD1-201ENST00000300413 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
SNRPD1-201ENST00000300413 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
SNRPD1-201ENST00000300413 KIAA0556O60303 1618 aa11.19□□□□□ -0.62
SNRPD1-201ENST00000300413 WDR43Q15061 677 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNRPD1-201ENST00000300413 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
SNRPD1-201ENST00000300413 DHX57Q6P158 1386 aaKnown RBP11.17□□□□□ -0.62
SNRPD1-201ENST00000300413 CD109Q6YHK3 1445 aa11.17□□□□□ -0.62
SNRPD1-201ENST00000300413 CCDC141Q6ZP82 1450 aa11.17□□□□□ -0.62
SNRPD1-201ENST00000300413 POGZQ7Z3K3 1410 aa11.16□□□□□ -0.62
SNRPD1-201ENST00000300413 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
SNRPD1-201ENST00000300413 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
SNRPD1-201ENST00000300413 HFM1A2PYH4 1435 aa11.15□□□□□ -0.62
SNRPD1-201ENST00000300413 DAPK1P53355 1430 aa11.15□□□□□ -0.62
SNRPD1-201ENST00000300413 SCAPERQ9BY12 1400 aa11.15□□□□□ -0.62
SNRPD1-201ENST00000300413 ROCK2O75116 1388 aaKnown RBP11.15□□□□□ -0.62
SNRPD1-201ENST00000300413 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNRPD1-201ENST00000300413 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
SNRPD1-201ENST00000300413 MRS2Q9HD23 443 aa11.13□□□□□ -0.63
SNRPD1-201ENST00000300413 TEX14Q8IWB6 1497 aa11.13□□□□□ -0.63
SNRPD1-201ENST00000300413 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
SNRPD1-201ENST00000300413 AFAP1Q8N556 730 aa11.12□□□□□ -0.63
SNRPD1-201ENST00000300413 ARHGEF11O15085 1522 aa11.11□□□□□ -0.63
SNRPD1-201ENST00000300413 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
SNRPD1-201ENST00000300413 FOXD1Q16676 465 aa11.11□□□□□ -0.63
SNRPD1-201ENST00000300413 L3MBTL2Q969R5 705 aa11.11□□□□□ -0.63
SNRPD1-201ENST00000300413 CAMSAP2Q08AD1 1489 aa11.11□□□□□ -0.63
SNRPD1-201ENST00000300413 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
SNRPD1-201ENST00000300413 ATP10BO94823 1461 aa11.1□□□□□ -0.63
SNRPD1-201ENST00000300413 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
SNRPD1-201ENST00000300413 PPP6R1Q9UPN7 881 aa11.1□□□□□ -0.63
SNRPD1-201ENST00000300413 NUP153P49790 1475 aaKnown RBP11.1□□□□□ -0.63
SNRPD1-201ENST00000300413 PTPN23Q9H3S7 1636 aa11.09□□□□□ -0.63
SNRPD1-201ENST00000300413 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
SNRPD1-201ENST00000300413 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
SNRPD1-201ENST00000300413 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
SNRPD1-201ENST00000300413 WDR7Q9Y4E6 1490 aa11.09□□□□□ -0.63
SNRPD1-201ENST00000300413 HDGFL2Q7Z4V5 671 aaPredicted RBP11.09□□□□□ -0.63
SNRPD1-201ENST00000300413 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
SNRPD1-201ENST00000300413 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
SNRPD1-201ENST00000300413 HSPA5P11021 654 aaKnown RBP11.08□□□□□ -0.64
SNRPD1-201ENST00000300413 SRPK2P78362 688 aaKnown RBP11.08□□□□□ -0.64
SNRPD1-201ENST00000300413 PLCH2O75038 1416 aa11.07□□□□□ -0.64
SNRPD1-201ENST00000300413 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.07□□□□□ -0.64
SNRPD1-201ENST00000300413 FANCAO15360 1455 aa11.07□□□□□ -0.64
SNRPD1-201ENST00000300413 ASXL2Q76L83 1435 aa11.07□□□□□ -0.64
SNRPD1-201ENST00000300413 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNRPD1-201ENST00000300413 SAMD9Q5K651 1589 aa11.06□□□□□ -0.64
SNRPD1-201ENST00000300413 DISP1Q96F81 1524 aa11.06□□□□□ -0.64
SNRPD1-201ENST00000300413 FAM9BQ8IZU0 186 aa11.06□□□□□ -0.64
SNRPD1-201ENST00000300413 SLC52A1Q9NWF4 448 aa11.06□□□□□ -0.64
SNRPD1-201ENST00000300413 CEP170Q5SW79 1584 aa11.06□□□□□ -0.64
SNRPD1-201ENST00000300413 KIAA1107Q9UPP5 1409 aa11.06□□□□□ -0.64
SNRPD1-201ENST00000300413 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
SNRPD1-201ENST00000300413 HIRIP3Q9BW71 556 aaPredicted RBP11.05□□□□□ -0.64
SNRPD1-201ENST00000300413 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
SNRPD1-201ENST00000300413 DAXXQ9UER7 740 aaPredicted RBP11.04□□□□□ -0.64
SNRPD1-201ENST00000300413 TERF2IPQ9NYB0 399 aa11.04□□□□□ -0.64
SNRPD1-201ENST00000300413 CFAP43Q8NDM7 1665 aa11.03□□□□□ -0.64
SNRPD1-201ENST00000300413 ABCC5O15440 1437 aa11.03□□□□□ -0.64
SNRPD1-201ENST00000300413 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
SNRPD1-201ENST00000300413 RPGRIP1LQ68CZ1 1315 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms