RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
SNAPC4-201ENST00000298532 VPS8Q8N3P4 1428 aa21.13■□□□□ 0.97
SNAPC4-201ENST00000298532 PTPRGP23470 1445 aa21.13■□□□□ 0.97
SNAPC4-201ENST00000298532 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
SNAPC4-201ENST00000298532 CC2D1BQ5T0F9 858 aaKnown RBP21.11■□□□□ 0.97
SNAPC4-201ENST00000298532 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
SNAPC4-201ENST00000298532 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
SNAPC4-201ENST00000298532 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
SNAPC4-201ENST00000298532 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
SNAPC4-201ENST00000298532 MLECQ14165 292 aa21.09■□□□□ 0.97
SNAPC4-201ENST00000298532 PLCB2Q00722 1185 aa21.08■□□□□ 0.97
SNAPC4-201ENST00000298532 NUDCQ9Y266 331 aa21.08■□□□□ 0.97
SNAPC4-201ENST00000298532 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.96
SNAPC4-201ENST00000298532 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
SNAPC4-201ENST00000298532 CDK11BP21127 795 aaKnown RBP21.06■□□□□ 0.96
SNAPC4-201ENST00000298532 CYB5RLQ6IPT4 315 aa21.06■□□□□ 0.96
SNAPC4-201ENST00000298532 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
SNAPC4-201ENST00000298532 TPRNQ4KMQ1 711 aa21.05■□□□□ 0.96
SNAPC4-201ENST00000298532 RCAN3Q9UKA8 241 aa21.05■□□□□ 0.96
SNAPC4-201ENST00000298532 CHAF1AQ13111 956 aaPredicted RBP21.04■□□□□ 0.96
SNAPC4-201ENST00000298532 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.04■□□□□ 0.96
SNAPC4-201ENST00000298532 POGKQ9P215 609 aa21.03■□□□□ 0.96
SNAPC4-201ENST00000298532 CFTRP13569 1480 aa21.02■□□□□ 0.96
SNAPC4-201ENST00000298532 TMF1P82094 1093 aa21.02■□□□□ 0.96
SNAPC4-201ENST00000298532 GGT6Q6P531 493 aa21.02■□□□□ 0.95
SNAPC4-201ENST00000298532 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
SNAPC4-201ENST00000298532 IFT140Q96RY7 1462 aa21■□□□□ 0.95
SNAPC4-201ENST00000298532 PTMSP20962 102 aa21■□□□□ 0.95
SNAPC4-201ENST00000298532 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 SPRYD3Q8NCJ5 442 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 USP35Q9P2H5 1018 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 GOLGA6L6A8MZA4 724 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
SNAPC4-201ENST00000298532 GBP4Q96PP9 640 aa20.97■□□□□ 0.95
SNAPC4-201ENST00000298532 NRDCO43847 1150 aa20.97■□□□□ 0.95
SNAPC4-201ENST00000298532 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
SNAPC4-201ENST00000298532 CFAP44Q96MT7 982 aa20.96■□□□□ 0.95
SNAPC4-201ENST00000298532 KTN1Q86UP2 1357 aaKnown RBP20.95■□□□□ 0.94
SNAPC4-201ENST00000298532 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
SNAPC4-201ENST00000298532 SLKQ9H2G2 1235 aaPredicted RBP20.95■□□□□ 0.94
SNAPC4-201ENST00000298532 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
SNAPC4-201ENST00000298532 RALBP1Q15311 655 aa20.93■□□□□ 0.94
SNAPC4-201ENST00000298532 GOLGA6L3A6NEY3 463 aa20.93■□□□□ 0.94
SNAPC4-201ENST00000298532 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
SNAPC4-201ENST00000298532 FANCIQ9NVI1 1328 aa20.92■□□□□ 0.94
SNAPC4-201ENST00000298532 GZF1Q9H116 711 aaPredicted RBP20.92■□□□□ 0.94
SNAPC4-201ENST00000298532 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
SNAPC4-201ENST00000298532 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
SNAPC4-201ENST00000298532 IGF1RP08069 1367 aa20.89■□□□□ 0.93
SNAPC4-201ENST00000298532 GOLGA6L4A6NEF3 574 aa20.88■□□□□ 0.93
SNAPC4-201ENST00000298532 ZBTB7CA1YPR0 619 aa20.87■□□□□ 0.93
SNAPC4-201ENST00000298532 RWDD1Q9H446 243 aaPredicted RBP20.86■□□□□ 0.93
SNAPC4-201ENST00000298532 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.934e-7■■■■■ 27.3
SNAPC4-201ENST00000298532 MCCP23508 829 aa20.86■□□□□ 0.93
SNAPC4-201ENST00000298532 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 PDE3BQ13370 1112 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 KIF3BO15066 747 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 KIAA2012Q0VF49 1180 aa20.84■□□□□ 0.93
SNAPC4-201ENST00000298532 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
SNAPC4-201ENST00000298532 A0A0G2JS52 829 aa20.82■□□□□ 0.92
SNAPC4-201ENST00000298532 KCNJ4P48050 445 aa20.81■□□□□ 0.92
SNAPC4-201ENST00000298532 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
SNAPC4-201ENST00000298532 FGD1P98174 961 aa20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 WASHC2CQ9Y4E1 1318 aa20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 NESP48681 1621 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 BICRAQ9NZM4 1560 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 GSE1Q14687 1217 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 DRC7Q8IY82 874 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 FAM69CQ0P6D2 419 aa20.78■□□□□ 0.92
SNAPC4-201ENST00000298532 LMOD2Q6P5Q4 547 aa20.78■□□□□ 0.92
SNAPC4-201ENST00000298532 NUP155O75694 1391 aa20.78■□□□□ 0.92
SNAPC4-201ENST00000298532 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 DHX57Q6P158 1386 aaKnown RBP20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 HNRNPMP52272 730 aaKnown RBP eCLIP20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 PKD2Q13563 968 aa20.76■□□□□ 0.91
SNAPC4-201ENST00000298532 PDE4AP27815 886 aa20.76■□□□□ 0.91
SNAPC4-201ENST00000298532 HSP90AA2PQ14568 343 aaPredicted RBP20.76■□□□□ 0.91
SNAPC4-201ENST00000298532 SYAP1Q96A49 352 aaPredicted RBP20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 TOPBP1Q92547 1522 aa20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 FOXD1Q16676 465 aa20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
SNAPC4-201ENST00000298532 MFAP1P55081 439 aaKnown RBP20.72■□□□□ 0.91
SNAPC4-201ENST00000298532 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
SNAPC4-201ENST00000298532 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
SNAPC4-201ENST00000298532 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
SNAPC4-201ENST00000298532 ARID3AQ99856 593 aa20.7■□□□□ 0.91
SNAPC4-201ENST00000298532 L3MBTL2Q969R5 705 aa20.7■□□□□ 0.9
SNAPC4-201ENST00000298532 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
SNAPC4-201ENST00000298532 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
SNAPC4-201ENST00000298532 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
SNAPC4-201ENST00000298532 FAM161AQ3B820 660 aa20.68■□□□□ 0.9
SNAPC4-201ENST00000298532 CENPQQ7L2Z9 268 aaPredicted RBP20.67■□□□□ 0.9
SNAPC4-201ENST00000298532 DDX11L8A8MPP1 907 aa20.67■□□□□ 0.9
SNAPC4-201ENST00000298532 PHLDB1Q86UU1 1377 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms