RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
SNAPC4-201ENST00000298532 VPS8Q8N3P4 1428 aa21.13■□□□□ 0.97
SNAPC4-201ENST00000298532 PTPRGP23470 1445 aa21.13■□□□□ 0.97
SNAPC4-201ENST00000298532 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
SNAPC4-201ENST00000298532 CC2D1BQ5T0F9 858 aaKnown RBP21.11■□□□□ 0.97
SNAPC4-201ENST00000298532 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
SNAPC4-201ENST00000298532 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
SNAPC4-201ENST00000298532 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
SNAPC4-201ENST00000298532 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
SNAPC4-201ENST00000298532 MLECQ14165 292 aa21.09■□□□□ 0.97
SNAPC4-201ENST00000298532 PLCB2Q00722 1185 aa21.08■□□□□ 0.97
SNAPC4-201ENST00000298532 NUDCQ9Y266 331 aa21.08■□□□□ 0.97
SNAPC4-201ENST00000298532 FGD5Q6ZNL6 1462 aa21.08■□□□□ 0.96
SNAPC4-201ENST00000298532 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
SNAPC4-201ENST00000298532 CDK11BP21127 795 aaKnown RBP21.06■□□□□ 0.96
SNAPC4-201ENST00000298532 CYB5RLQ6IPT4 315 aa21.06■□□□□ 0.96
SNAPC4-201ENST00000298532 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
SNAPC4-201ENST00000298532 TPRNQ4KMQ1 711 aa21.05■□□□□ 0.96
SNAPC4-201ENST00000298532 RCAN3Q9UKA8 241 aa21.05■□□□□ 0.96
SNAPC4-201ENST00000298532 CHAF1AQ13111 956 aaPredicted RBP21.04■□□□□ 0.96
SNAPC4-201ENST00000298532 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.04■□□□□ 0.96
SNAPC4-201ENST00000298532 POGKQ9P215 609 aa21.03■□□□□ 0.96
SNAPC4-201ENST00000298532 CFTRP13569 1480 aa21.02■□□□□ 0.96
SNAPC4-201ENST00000298532 TMF1P82094 1093 aa21.02■□□□□ 0.96
SNAPC4-201ENST00000298532 GGT6Q6P531 493 aa21.02■□□□□ 0.95
SNAPC4-201ENST00000298532 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
SNAPC4-201ENST00000298532 IFT140Q96RY7 1462 aa21■□□□□ 0.95
SNAPC4-201ENST00000298532 PTMSP20962 102 aa21■□□□□ 0.95
SNAPC4-201ENST00000298532 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 SPRYD3Q8NCJ5 442 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 USP35Q9P2H5 1018 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 GOLGA6L6A8MZA4 724 aa20.99■□□□□ 0.95
SNAPC4-201ENST00000298532 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
SNAPC4-201ENST00000298532 GBP4Q96PP9 640 aa20.97■□□□□ 0.95
SNAPC4-201ENST00000298532 NRDCO43847 1150 aa20.97■□□□□ 0.95
SNAPC4-201ENST00000298532 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
SNAPC4-201ENST00000298532 CFAP44Q96MT7 982 aa20.96■□□□□ 0.95
SNAPC4-201ENST00000298532 KTN1Q86UP2 1357 aaKnown RBP20.95■□□□□ 0.94
SNAPC4-201ENST00000298532 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
SNAPC4-201ENST00000298532 SLKQ9H2G2 1235 aaPredicted RBP20.95■□□□□ 0.94
SNAPC4-201ENST00000298532 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
SNAPC4-201ENST00000298532 RALBP1Q15311 655 aa20.93■□□□□ 0.94
SNAPC4-201ENST00000298532 GOLGA6L3A6NEY3 463 aa20.93■□□□□ 0.94
SNAPC4-201ENST00000298532 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
SNAPC4-201ENST00000298532 FANCIQ9NVI1 1328 aa20.92■□□□□ 0.94
SNAPC4-201ENST00000298532 GZF1Q9H116 711 aaPredicted RBP20.92■□□□□ 0.94
SNAPC4-201ENST00000298532 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
SNAPC4-201ENST00000298532 U2SURPO15042 1029 aaKnown RBP20.89■□□□□ 0.93
SNAPC4-201ENST00000298532 IGF1RP08069 1367 aa20.89■□□□□ 0.93
SNAPC4-201ENST00000298532 GOLGA6L4A6NEF3 574 aa20.88■□□□□ 0.93
SNAPC4-201ENST00000298532 ZBTB7CA1YPR0 619 aa20.87■□□□□ 0.93
SNAPC4-201ENST00000298532 RWDD1Q9H446 243 aaPredicted RBP20.86■□□□□ 0.93
SNAPC4-201ENST00000298532 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.934e-7■■■■■ 27.3
SNAPC4-201ENST00000298532 MCCP23508 829 aa20.86■□□□□ 0.93
SNAPC4-201ENST00000298532 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 PDE3BQ13370 1112 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 KIF3BO15066 747 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
SNAPC4-201ENST00000298532 KIAA2012Q0VF49 1180 aa20.84■□□□□ 0.93
SNAPC4-201ENST00000298532 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
SNAPC4-201ENST00000298532 A0A0G2JS52 829 aa20.82■□□□□ 0.92
SNAPC4-201ENST00000298532 KCNJ4P48050 445 aa20.81■□□□□ 0.92
SNAPC4-201ENST00000298532 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
SNAPC4-201ENST00000298532 FGD1P98174 961 aa20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 WASHC2CQ9Y4E1 1318 aa20.8■□□□□ 0.92
SNAPC4-201ENST00000298532 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 NESP48681 1621 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 BICRAQ9NZM4 1560 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 GSE1Q14687 1217 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 DRC7Q8IY82 874 aa20.79■□□□□ 0.92
SNAPC4-201ENST00000298532 FAM69CQ0P6D2 419 aa20.78■□□□□ 0.92
SNAPC4-201ENST00000298532 LMOD2Q6P5Q4 547 aa20.78■□□□□ 0.92
SNAPC4-201ENST00000298532 NUP155O75694 1391 aa20.78■□□□□ 0.92
SNAPC4-201ENST00000298532 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 DHX57Q6P158 1386 aaKnown RBP20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 HNRNPMP52272 730 aaKnown RBP eCLIP20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
SNAPC4-201ENST00000298532 PKD2Q13563 968 aa20.76■□□□□ 0.91
SNAPC4-201ENST00000298532 PDE4AP27815 886 aa20.76■□□□□ 0.91
SNAPC4-201ENST00000298532 HSP90AA2PQ14568 343 aaPredicted RBP20.76■□□□□ 0.91
SNAPC4-201ENST00000298532 SYAP1Q96A49 352 aaPredicted RBP20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 TOPBP1Q92547 1522 aa20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 FOXD1Q16676 465 aa20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 NLRP13Q86W25 1043 aa20.75■□□□□ 0.91
SNAPC4-201ENST00000298532 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
SNAPC4-201ENST00000298532 MFAP1P55081 439 aaKnown RBP20.72■□□□□ 0.91
SNAPC4-201ENST00000298532 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
SNAPC4-201ENST00000298532 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
SNAPC4-201ENST00000298532 ZBED9Q6R2W3 1325 aa20.71■□□□□ 0.91
SNAPC4-201ENST00000298532 ARID3AQ99856 593 aa20.7■□□□□ 0.91
SNAPC4-201ENST00000298532 L3MBTL2Q969R5 705 aa20.7■□□□□ 0.9
SNAPC4-201ENST00000298532 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
SNAPC4-201ENST00000298532 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
SNAPC4-201ENST00000298532 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
SNAPC4-201ENST00000298532 FAM161AQ3B820 660 aa20.68■□□□□ 0.9
SNAPC4-201ENST00000298532 CENPQQ7L2Z9 268 aaPredicted RBP20.67■□□□□ 0.9
SNAPC4-201ENST00000298532 DDX11L8A8MPP1 907 aa20.67■□□□□ 0.9
SNAPC4-201ENST00000298532 PHLDB1Q86UU1 1377 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms