RNA–Protein interactions for RNA: ENST00000296859.10

RAPGEF6-201, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 5,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-201ENST00000296859 MAP3K9P80192 1104 aa5.56□□□□□ -1.52
RAPGEF6-201ENST00000296859 U2SURPO15042 1029 aaKnown RBP5.56□□□□□ -1.52
RAPGEF6-201ENST00000296859 CASC1Q6TDU7 716 aa5.56□□□□□ -1.52
RAPGEF6-201ENST00000296859 GGT6Q6P531 493 aa5.55□□□□□ -1.52
RAPGEF6-201ENST00000296859 NOC3LQ8WTT2 800 aaKnown RBP5.55□□□□□ -1.52
RAPGEF6-201ENST00000296859 STK26Q9P289 416 aa5.55□□□□□ -1.52
RAPGEF6-201ENST00000296859 IBSPP21815 317 aaPredicted RBP5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 TOMM22Q9NS69 142 aa5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 PIP4K2BP78356 416 aa5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 KIAA2012Q0VF49 1180 aa5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 ERICH6BQ5W0A0 696 aa5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 NUTM2FA1L443 756 aa5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 RTF1Q92541 710 aaKnown RBP5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 CEP89Q96ST8 783 aa5.54□□□□□ -1.52
RAPGEF6-201ENST00000296859 TONSLQ96HA7 1378 aa5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 EID1Q9Y6B2 187 aa5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 SPDYE4A6NLX3 237 aa5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 PTMAP06454 111 aaKnown RBP5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 CHAF1AQ13111 956 aaPredicted RBP5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 FTSJ3Q8IY81 847 aaKnown RBP5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 SENP3-EIF4A1A0A087X0R7 540 aa5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 GRM1Q13255 1194 aa5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 NUDCQ9Y266 331 aa5.53□□□□□ -1.52
RAPGEF6-201ENST00000296859 LTV1Q96GA3 475 aaPredicted RBP5.52□□□□□ -1.53
RAPGEF6-201ENST00000296859 PPP4R2Q9NY27 417 aa5.52□□□□□ -1.53
RAPGEF6-201ENST00000296859 RANBP2P49792 3224 aaKnown RBP5.52□□□□□ -1.53
RAPGEF6-201ENST00000296859 NUTM2BA6NNL0 878 aaPredicted RBP5.51□□□□□ -1.53
RAPGEF6-201ENST00000296859 NUTM2EB1AL46 878 aaPredicted RBP5.51□□□□□ -1.53
RAPGEF6-201ENST00000296859 NUTM2AQ8IVF1 878 aaPredicted RBP5.51□□□□□ -1.53
RAPGEF6-201ENST00000296859 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.51□□□□□ -1.532e-6■■■■■ 92.8
RAPGEF6-201ENST00000296859 MYCNP04198 464 aaPredicted RBP5.51□□□□□ -1.53
RAPGEF6-201ENST00000296859 CSRNP3Q8WYN3 585 aa5.51□□□□□ -1.53
RAPGEF6-201ENST00000296859 GOLGA6L4A6NEF3 574 aa5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 HRCP23327 699 aa5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 SLC4A3P48751 1232 aa5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 CREBRFQ8IUR6 639 aa5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 PLCD3Q8N3E9 789 aa5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 NGDNQ8NEJ9 315 aaKnown RBP5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 NOL10Q9BSC4 688 aaKnown RBP5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 UNC80Q8N2C7 3258 aa5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 TMEM87AQ8NBN3 555 aa5.5□□□□□ -1.53
RAPGEF6-201ENST00000296859 A0A0U1RQG5 324 aaPredicted RBP5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 GOLGA6L6A8MZA4 724 aa5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 PPP6R1Q9UPN7 881 aa5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 CYB5RLQ6IPT4 315 aa5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 APBB1O00213 710 aa5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 HNRNPUQ00839 825 aaKnown RBP eCLIP5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 SPRYD3Q8NCJ5 442 aa5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 GOLGA6L22H0YM25 854 aa5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 DHX16O60231 1041 aaKnown RBP5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 CCDC43Q96MW1 224 aaKnown RBP5.49□□□□□ -1.53
RAPGEF6-201ENST00000296859 BPTFQ12830 3046 aa5.48□□□□□ -1.53
RAPGEF6-201ENST00000296859 ACIN1Q9UKV3 1341 aaKnown RBP5.48□□□□□ -1.53
RAPGEF6-201ENST00000296859 NUTM2DQ5VT03 806 aaPredicted RBP5.48□□□□□ -1.53
RAPGEF6-201ENST00000296859 R3HCC1Q9Y3T6 440 aaKnown RBP5.48□□□□□ -1.53
RAPGEF6-201ENST00000296859 KNSTRNQ9Y448 316 aa5.48□□□□□ -1.53
RAPGEF6-201ENST00000296859 RRP7BPQ9NSQ0 103 aa5.48□□□□□ -1.53
RAPGEF6-201ENST00000296859 NRDCO43847 1150 aa5.47□□□□□ -1.53
RAPGEF6-201ENST00000296859 TMEM132AQ24JP5 1023 aa5.47□□□□□ -1.53
RAPGEF6-201ENST00000296859 RBM33Q96EV2 1170 aaKnown RBP5.47□□□□□ -1.53
RAPGEF6-201ENST00000296859 L1TD1Q5T7N2 865 aaKnown RBP5.47□□□□□ -1.53
RAPGEF6-201ENST00000296859 WDHD1O75717 1129 aaPredicted RBP5.46□□□□□ -1.53
RAPGEF6-201ENST00000296859 C16orf71Q8IYS4 520 aaPredicted RBP5.46□□□□□ -1.53
RAPGEF6-201ENST00000296859 FRAT1Q92837 279 aaPredicted RBP5.46□□□□□ -1.53
RAPGEF6-201ENST00000296859 MTUS2Q5JR59 1369 aa5.46□□□□□ -1.53
RAPGEF6-201ENST00000296859 CCDC136Q96JN2 1154 aa5.46□□□□□ -1.54
RAPGEF6-201ENST00000296859 DDRGK1Q96HY6 314 aa5.46□□□□□ -1.54
RAPGEF6-201ENST00000296859 VPS37DQ86XT2 251 aa5.46□□□□□ -1.54
RAPGEF6-201ENST00000296859 AMOTL1Q8IY63 956 aa5.46□□□□□ -1.54
RAPGEF6-201ENST00000296859 NGEFQ8N5V2 710 aa5.46□□□□□ -1.54
RAPGEF6-201ENST00000296859 USP35Q9P2H5 1018 aa5.46□□□□□ -1.54
RAPGEF6-201ENST00000296859 CCDC180Q9P1Z9 1646 aa5.45□□□□□ -1.54
RAPGEF6-201ENST00000296859 WWC2Q6AWC2 1192 aa5.45□□□□□ -1.54
RAPGEF6-201ENST00000296859 CCDC97Q96F63 343 aaPredicted RBP5.45□□□□□ -1.54
RAPGEF6-201ENST00000296859 AK7Q96M32 723 aa5.45□□□□□ -1.54
RAPGEF6-201ENST00000296859 CFDP1Q9UEE9 299 aaPredicted RBP5.45□□□□□ -1.54
RAPGEF6-201ENST00000296859 CDCA8Q53HL2 280 aa5.45□□□□□ -1.54
RAPGEF6-201ENST00000296859 HSP90B1P14625 803 aaKnown RBP5.45□□□□□ -1.54
RAPGEF6-201ENST00000296859 CHMP4BP1P59074 171 aa5.44□□□□□ -1.54
RAPGEF6-201ENST00000296859 MRS2Q9HD23 443 aa5.44□□□□□ -1.54
RAPGEF6-201ENST00000296859 RFX1P22670 979 aa5.44□□□□□ -1.54
RAPGEF6-201ENST00000296859 AMPHP49418 695 aa5.44□□□□□ -1.54
RAPGEF6-201ENST00000296859 WASHC2AQ641Q2 1341 aa5.44□□□□□ -1.54
RAPGEF6-201ENST00000296859 IKQ13123 557 aaPredicted RBP5.44□□□□□ -1.54
RAPGEF6-201ENST00000296859 KANK1Q14678 1352 aa5.43□□□□□ -1.54
RAPGEF6-201ENST00000296859 TTLL12Q14166 644 aaPredicted RBP5.43□□□□□ -1.54
RAPGEF6-201ENST00000296859 HDGFL2Q7Z4V5 671 aaPredicted RBP5.43□□□□□ -1.54
RAPGEF6-201ENST00000296859 SPEGQ15772 3267 aa5.43□□□□□ -1.54
RAPGEF6-201ENST00000296859 PES1O00541 588 aaKnown RBP5.43□□□□□ -1.54
RAPGEF6-201ENST00000296859 ATF3P18847 181 aa5.43□□□□□ -1.54
RAPGEF6-201ENST00000296859 LAMA2P24043 3122 aaKnown RBP5.43□□□□□ -1.54
RAPGEF6-201ENST00000296859 SPENQ96T58 3664 aaKnown RBP5.42□□□□□ -1.54
RAPGEF6-201ENST00000296859 CA8P35219 290 aa5.42□□□□□ -1.54
RAPGEF6-201ENST00000296859 KIAA1211Q6ZU35 1233 aa5.42□□□□□ -1.54
RAPGEF6-201ENST00000296859 DDX10Q13206 875 aaKnown RBP5.42□□□□□ -1.54
RAPGEF6-201ENST00000296859 DRC7Q8IY82 874 aa5.42□□□□□ -1.54
RAPGEF6-201ENST00000296859 FAM177BA6PVY3 158 aa5.41□□□□□ -1.54
RAPGEF6-201ENST00000296859 BECN1Q14457 450 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms