RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 UACAQ9BZF9 1416 aa15.19■□□□□ 0.02
NPC1L1-201ENST00000289547 EID1Q9Y6B2 187 aa15.18■□□□□ 0.02
NPC1L1-201ENST00000289547 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
NPC1L1-201ENST00000289547 HAP1P54257 671 aaPredicted RBP15.18■□□□□ 0.02
NPC1L1-201ENST00000289547 IQGAP2Q13576 1575 aa15.18■□□□□ 0.02
NPC1L1-201ENST00000289547 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
NPC1L1-201ENST00000289547 DEKP35659 375 aaKnown RBP15.17■□□□□ 0.02
NPC1L1-201ENST00000289547 POGKQ9P215 609 aa15.17■□□□□ 0.02
NPC1L1-201ENST00000289547 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
NPC1L1-201ENST00000289547 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
NPC1L1-201ENST00000289547 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
NPC1L1-201ENST00000289547 CASKIN1Q8WXD9 1431 aa15.15■□□□□ 0.02
NPC1L1-201ENST00000289547 CDCA8Q53HL2 280 aa15.14■□□□□ 0.01
NPC1L1-201ENST00000289547 CANXP27824 592 aaKnown RBP15.14■□□□□ 0.01
NPC1L1-201ENST00000289547 NUP155O75694 1391 aa15.13■□□□□ 0.01
NPC1L1-201ENST00000289547 RBM19Q9Y4C8 960 aaKnown RBP15.13■□□□□ 0.01
NPC1L1-201ENST00000289547 ARHGAP5Q13017 1502 aa15.1■□□□□ 0.01
NPC1L1-201ENST00000289547 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
NPC1L1-201ENST00000289547 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
NPC1L1-201ENST00000289547 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
NPC1L1-201ENST00000289547 PKD2Q13563 968 aa15.09■□□□□ 0.01
NPC1L1-201ENST00000289547 MYOM3Q5VTT5 1437 aa15.08■□□□□ 0
NPC1L1-201ENST00000289547 HECW1Q76N89 1606 aa15.08■□□□□ 0
NPC1L1-201ENST00000289547 NOP58Q9Y2X3 529 aaKnown RBP15.08■□□□□ 0
NPC1L1-201ENST00000289547 HIRIP3Q9BW71 556 aaPredicted RBP15.07■□□□□ 0
NPC1L1-201ENST00000289547 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
NPC1L1-201ENST00000289547 EIF4G2P78344 907 aaKnown RBP eCLIP15.06■□□□□ 0
NPC1L1-201ENST00000289547 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ 0
NPC1L1-201ENST00000289547 TMC1Q8TDI8 760 aa15.05■□□□□ -0
NPC1L1-201ENST00000289547 POGZQ7Z3K3 1410 aa15.04■□□□□ -0
NPC1L1-201ENST00000289547 MRS2Q9HD23 443 aa15.04■□□□□ -0
NPC1L1-201ENST00000289547 ERICH6BQ5W0A0 696 aa15.04■□□□□ -0
NPC1L1-201ENST00000289547 CARD11Q9BXL7 1154 aa15.04■□□□□ -0
NPC1L1-201ENST00000289547 UPF2Q9HAU5 1272 aaKnown RBP15.04■□□□□ -0
NPC1L1-201ENST00000289547 TROQ12816 1431 aaPredicted RBP15.03■□□□□ -0
NPC1L1-201ENST00000289547 ZBTB7CA1YPR0 619 aa15.03■□□□□ -0
NPC1L1-201ENST00000289547 HSP90AA1P07900 732 aaKnown RBP15.02■□□□□ -0
NPC1L1-201ENST00000289547 LAS1LQ9Y4W2 734 aaKnown RBP15.02■□□□□ -0
NPC1L1-201ENST00000289547 EIF4G3O43432 1585 aaKnown RBP15.02□□□□□ -0.01
NPC1L1-201ENST00000289547 DCAF11Q8TEB1 546 aa15.02□□□□□ -0.01
NPC1L1-201ENST00000289547 WDR97A6NE52 1622 aa15.01□□□□□ -0.01
NPC1L1-201ENST00000289547 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
NPC1L1-201ENST00000289547 LMOD2Q6P5Q4 547 aa15□□□□□ -0.01
NPC1L1-201ENST00000289547 PLB1Q6P1J6 1458 aa15□□□□□ -0.01
NPC1L1-201ENST00000289547 CD109Q6YHK3 1445 aa15□□□□□ -0.01
NPC1L1-201ENST00000289547 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
NPC1L1-201ENST00000289547 MPHOSPH9Q99550 1183 aa14.99□□□□□ -0.01
NPC1L1-201ENST00000289547 DDRGK1Q96HY6 314 aa14.97□□□□□ -0.01
NPC1L1-201ENST00000289547 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.97□□□□□ -0.01
NPC1L1-201ENST00000289547 EHBP1L1Q8N3D4 1523 aa14.97□□□□□ -0.01
NPC1L1-201ENST00000289547 PPP4R2Q9NY27 417 aa14.96□□□□□ -0.01
NPC1L1-201ENST00000289547 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
NPC1L1-201ENST00000289547 NAP1L5Q96NT1 182 aaPredicted RBP14.96□□□□□ -0.01
NPC1L1-201ENST00000289547 ADAMTS12P58397 1594 aa14.96□□□□□ -0.02
NPC1L1-201ENST00000289547 LRRC9Q6ZRR7 1453 aa14.95□□□□□ -0.02
NPC1L1-201ENST00000289547 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
NPC1L1-201ENST00000289547 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
NPC1L1-201ENST00000289547 KIF15Q9NS87 1388 aa14.93□□□□□ -0.02
NPC1L1-201ENST00000289547 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.93□□□□□ -0.02
NPC1L1-201ENST00000289547 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
NPC1L1-201ENST00000289547 FGD6Q6ZV73 1430 aa14.93□□□□□ -0.02
NPC1L1-201ENST00000289547 SCAPERQ9BY12 1400 aa14.93□□□□□ -0.02
NPC1L1-201ENST00000289547 A0A0G2JS52 829 aa14.93□□□□□ -0.02
NPC1L1-201ENST00000289547 TRIM44Q96DX7 344 aaPredicted RBP14.92□□□□□ -0.02
NPC1L1-201ENST00000289547 STK26Q9P289 416 aa14.91□□□□□ -0.02
NPC1L1-201ENST00000289547 TEX14Q8IWB6 1497 aa14.91□□□□□ -0.02
NPC1L1-201ENST00000289547 B4GALNT3Q6L9W6 998 aa14.91□□□□□ -0.02
NPC1L1-201ENST00000289547 EPRSP07814 1512 aaKnown RBP14.91□□□□□ -0.02
NPC1L1-201ENST00000289547 SRPK2P78362 688 aaKnown RBP14.91□□□□□ -0.02
NPC1L1-201ENST00000289547 VGFO15240 615 aaPredicted RBP14.9□□□□□ -0.02
NPC1L1-201ENST00000289547 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
NPC1L1-201ENST00000289547 KNSTRNQ9Y448 316 aa14.89□□□□□ -0.03
NPC1L1-201ENST00000289547 RAPGEF3O95398 923 aa14.89□□□□□ -0.03
NPC1L1-201ENST00000289547 TMF1P82094 1093 aa14.89□□□□□ -0.03
NPC1L1-201ENST00000289547 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
NPC1L1-201ENST00000289547 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
NPC1L1-201ENST00000289547 WDR43Q15061 677 aaKnown RBP eCLIP14.88□□□□□ -0.03
NPC1L1-201ENST00000289547 CFAP53Q96M91 514 aa14.88□□□□□ -0.03
NPC1L1-201ENST00000289547 MIA2Q96PC5 1412 aa14.88□□□□□ -0.03
NPC1L1-201ENST00000289547 EIF3AQ14152 1382 aaKnown RBP14.87□□□□□ -0.03
NPC1L1-201ENST00000289547 SIN3AQ96ST3 1273 aa14.87□□□□□ -0.03
NPC1L1-201ENST00000289547 FOXD1Q16676 465 aa14.86□□□□□ -0.03
NPC1L1-201ENST00000289547 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.86□□□□□ -0.03
NPC1L1-201ENST00000289547 KIF14Q15058 1648 aa14.86□□□□□ -0.03
NPC1L1-201ENST00000289547 NUP160Q12769 1436 aa14.85□□□□□ -0.03
NPC1L1-201ENST00000289547 SAFB2Q14151 953 aaKnown RBP eCLIP14.85□□□□□ -0.03
NPC1L1-201ENST00000289547 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
NPC1L1-201ENST00000289547 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.03
NPC1L1-201ENST00000289547 BECN1Q14457 450 aa14.83□□□□□ -0.03
NPC1L1-201ENST00000289547 TNNT2P45379 298 aaPredicted RBP14.83□□□□□ -0.04
NPC1L1-201ENST00000289547 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.04
NPC1L1-201ENST00000289547 PBRM1Q86U86 1689 aa14.83□□□□□ -0.04
NPC1L1-201ENST00000289547 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.04
NPC1L1-201ENST00000289547 PHLDB1Q86UU1 1377 aa14.83□□□□□ -0.04
NPC1L1-201ENST00000289547 ASXL2Q76L83 1435 aa14.83□□□□□ -0.04
NPC1L1-201ENST00000289547 ADGRL1O94910 1474 aa14.83□□□□□ -0.04
NPC1L1-201ENST00000289547 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
NPC1L1-201ENST00000289547 NUTM2DQ5VT03 806 aaPredicted RBP14.81□□□□□ -0.04
NPC1L1-201ENST00000289547 THEMISQ8N1K5 641 aaPredicted RBP14.81□□□□□ -0.04
NPC1L1-201ENST00000289547 AKNAQ7Z591 1439 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms