RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
SHROOM4-201ENST00000289292 APBB1O00213 710 aa19.6■□□□□ 0.73
SHROOM4-201ENST00000289292 POGKQ9P215 609 aa19.6■□□□□ 0.73
SHROOM4-201ENST00000289292 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
SHROOM4-201ENST00000289292 PKD2Q13563 968 aa19.59■□□□□ 0.73
SHROOM4-201ENST00000289292 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.73
SHROOM4-201ENST00000289292 NACADO15069 1562 aa19.58■□□□□ 0.72
SHROOM4-201ENST00000289292 OS9Q13438 667 aaPredicted RBP19.57■□□□□ 0.72
SHROOM4-201ENST00000289292 NAP1L2Q9ULW6 460 aaPredicted RBP19.57■□□□□ 0.72
SHROOM4-201ENST00000289292 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
SHROOM4-201ENST00000289292 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
SHROOM4-201ENST00000289292 SLC4A3P48751 1232 aa19.55■□□□□ 0.72
SHROOM4-201ENST00000289292 SOX12O15370 315 aa19.54■□□□□ 0.72
SHROOM4-201ENST00000289292 MS4A1P11836 297 aa19.54■□□□□ 0.72
SHROOM4-201ENST00000289292 TULP1O00294 542 aaPredicted RBP19.53■□□□□ 0.72
SHROOM4-201ENST00000289292 ROCK2O75116 1388 aaKnown RBP19.53■□□□□ 0.72
SHROOM4-201ENST00000289292 CCDC146Q8IYE0 955 aa19.53■□□□□ 0.72
SHROOM4-201ENST00000289292 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
SHROOM4-201ENST00000289292 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
SHROOM4-201ENST00000289292 KCNJ4P48050 445 aa19.52■□□□□ 0.72
SHROOM4-201ENST00000289292 WIZO95785 1651 aa19.51■□□□□ 0.71
SHROOM4-201ENST00000289292 ITPRIPQ8IWB1 547 aa19.51■□□□□ 0.71
SHROOM4-201ENST00000289292 PNNQ9H307 717 aaKnown RBP19.5■□□□□ 0.71
SHROOM4-201ENST00000289292 FGD1P98174 961 aa19.49■□□□□ 0.71
SHROOM4-201ENST00000289292 DRC7Q8IY82 874 aa19.49■□□□□ 0.71
SHROOM4-201ENST00000289292 DHX57Q6P158 1386 aaKnown RBP19.49■□□□□ 0.71
SHROOM4-201ENST00000289292 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
SHROOM4-201ENST00000289292 L3MBTL2Q969R5 705 aa19.47■□□□□ 0.71
SHROOM4-201ENST00000289292 PLIN1O60240 522 aa19.47■□□□□ 0.71
SHROOM4-201ENST00000289292 CHAF1AQ13111 956 aaPredicted RBP19.46■□□□□ 0.71
SHROOM4-201ENST00000289292 CHMP4BQ9H444 224 aaKnown RBP19.46■□□□□ 0.71
SHROOM4-201ENST00000289292 GOLGA6L3A6NEY3 463 aa19.46■□□□□ 0.71
SHROOM4-201ENST00000289292 RALBP1Q15311 655 aa19.46■□□□□ 0.71
SHROOM4-201ENST00000289292 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
SHROOM4-201ENST00000289292 LMOD2Q6P5Q4 547 aa19.44■□□□□ 0.7
SHROOM4-201ENST00000289292 CLUAP1Q96AJ1 413 aa19.44■□□□□ 0.7
SHROOM4-201ENST00000289292 GOLGA6L6A8MZA4 724 aa19.43■□□□□ 0.7
SHROOM4-201ENST00000289292 GBP4Q96PP9 640 aa19.43■□□□□ 0.7
SHROOM4-201ENST00000289292 STK26Q9P289 416 aa19.43■□□□□ 0.7
SHROOM4-201ENST00000289292 RWDD1Q9H446 243 aaPredicted RBP19.41■□□□□ 0.7
SHROOM4-201ENST00000289292 EXOC6Q8TAG9 804 aa19.41■□□□□ 0.7
SHROOM4-201ENST00000289292 MCCP23508 829 aa19.4■□□□□ 0.7
SHROOM4-201ENST00000289292 U2AF1L5P0DN76 240 aaPredicted RBP19.4■□□□□ 0.7
SHROOM4-201ENST00000289292 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHROOM4-201ENST00000289292 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.7
SHROOM4-201ENST00000289292 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.69
SHROOM4-201ENST00000289292 PDE4AP27815 886 aa19.38■□□□□ 0.69
SHROOM4-201ENST00000289292 NOL8Q76FK4 1167 aaKnown RBP19.37■□□□□ 0.69
SHROOM4-201ENST00000289292 NUP155O75694 1391 aa19.37■□□□□ 0.69
SHROOM4-201ENST00000289292 FMN1Q68DA7 1419 aa19.36■□□□□ 0.69
SHROOM4-201ENST00000289292 GOLGA2Q08379 1002 aa19.36■□□□□ 0.69
SHROOM4-201ENST00000289292 FOXD4L5Q5VV16 416 aaPredicted RBP19.35■□□□□ 0.69
SHROOM4-201ENST00000289292 FOXD4L4Q8WXT5 416 aaPredicted RBP19.35■□□□□ 0.69
SHROOM4-201ENST00000289292 PMFBP1Q8TBY8 1022 aa19.35■□□□□ 0.69
SHROOM4-201ENST00000289292 FHOD3Q2V2M9 1422 aa19.35■□□□□ 0.69
SHROOM4-201ENST00000289292 HAP1P54257 671 aaPredicted RBP19.35■□□□□ 0.69
SHROOM4-201ENST00000289292 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
SHROOM4-201ENST00000289292 SMC4Q9NTJ3 1288 aa19.34■□□□□ 0.69
SHROOM4-201ENST00000289292 KANK1Q14678 1352 aa19.33■□□□□ 0.68
SHROOM4-201ENST00000289292 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
SHROOM4-201ENST00000289292 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
SHROOM4-201ENST00000289292 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
SHROOM4-201ENST00000289292 IPO8O15397 1037 aaKnown RBP19.32■□□□□ 0.68
SHROOM4-201ENST00000289292 RRP1P56182 461 aaKnown RBP19.3■□□□□ 0.68
SHROOM4-201ENST00000289292 GSE1Q14687 1217 aa19.3■□□□□ 0.68
SHROOM4-201ENST00000289292 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
SHROOM4-201ENST00000289292 KIAA2012Q0VF49 1180 aa19.28■□□□□ 0.68
SHROOM4-201ENST00000289292 BCL2L13Q9BXK5 485 aa19.28■□□□□ 0.68
SHROOM4-201ENST00000289292 FANCIQ9NVI1 1328 aa19.28■□□□□ 0.68
SHROOM4-201ENST00000289292 NRDCO43847 1150 aa19.27■□□□□ 0.68
SHROOM4-201ENST00000289292 NLRP13Q86W25 1043 aa19.27■□□□□ 0.68
SHROOM4-201ENST00000289292 PRKRIP1Q9H875 184 aaPredicted RBP19.27■□□□□ 0.68
SHROOM4-201ENST00000289292 MLECQ14165 292 aa19.27■□□□□ 0.68
SHROOM4-201ENST00000289292 PTMSP20962 102 aa19.27■□□□□ 0.67
SHROOM4-201ENST00000289292 NUTM2DQ5VT03 806 aaPredicted RBP19.27■□□□□ 0.67
SHROOM4-201ENST00000289292 RSPH6AQ9H0K4 717 aa19.27■□□□□ 0.67
SHROOM4-201ENST00000289292 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
SHROOM4-201ENST00000289292 KIF15Q9NS87 1388 aa19.26■□□□□ 0.67
SHROOM4-201ENST00000289292 GGT6Q6P531 493 aa19.26■□□□□ 0.67
SHROOM4-201ENST00000289292 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
SHROOM4-201ENST00000289292 HNRNPMP52272 730 aaKnown RBP eCLIP19.25■□□□□ 0.67
SHROOM4-201ENST00000289292 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
SHROOM4-201ENST00000289292 FAM161AQ3B820 660 aa19.24■□□□□ 0.67
SHROOM4-201ENST00000289292 KIAA1211Q6ZU35 1233 aa19.24■□□□□ 0.67
SHROOM4-201ENST00000289292 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
SHROOM4-201ENST00000289292 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
SHROOM4-201ENST00000289292 ST20-MTHFSA0A0A6YYL1 179 aa19.24■□□□□ 0.67
SHROOM4-201ENST00000289292 TRIM6-TRIM34B2RNG4 842 aa19.24■□□□□ 0.67
SHROOM4-201ENST00000289292 CALD1Q05682 793 aaKnown RBP19.23■□□□□ 0.67
SHROOM4-201ENST00000289292 PANK3Q9H999 370 aa19.23■□□□□ 0.67
SHROOM4-201ENST00000289292 HDGFL2Q7Z4V5 671 aaPredicted RBP19.22■□□□□ 0.67
SHROOM4-201ENST00000289292 CENPQQ7L2Z9 268 aaPredicted RBP19.22■□□□□ 0.67
SHROOM4-201ENST00000289292 ANKRD30AQ9BXX3 1397 aa19.21■□□□□ 0.67
SHROOM4-201ENST00000289292 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
SHROOM4-201ENST00000289292 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
SHROOM4-201ENST00000289292 FOXD4L6Q3SYB3 417 aaPredicted RBP19.2■□□□□ 0.66
SHROOM4-201ENST00000289292 FOXD4L3Q6VB84 417 aaPredicted RBP19.2■□□□□ 0.66
SHROOM4-201ENST00000289292 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
SHROOM4-201ENST00000289292 CFAP44Q96MT7 982 aa19.2■□□□□ 0.66
SHROOM4-201ENST00000289292 SLC4A10Q6U841 1118 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms