RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
SLC28A1-201ENST00000286749 DAPK1P53355 1430 aa18.3■□□□□ 0.52
SLC28A1-201ENST00000286749 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
SLC28A1-201ENST00000286749 DNMT1P26358 1616 aaKnown RBP18.29■□□□□ 0.52
SLC28A1-201ENST00000286749 RPRD2Q5VT52 1461 aaKnown RBP18.29■□□□□ 0.52
SLC28A1-201ENST00000286749 ANKRD30BQ9BXX2 1392 aa18.29■□□□□ 0.52
SLC28A1-201ENST00000286749 NBPF8Q3BBV2 869 aa18.28■□□□□ 0.52
SLC28A1-201ENST00000286749 TEX14Q8IWB6 1497 aa18.28■□□□□ 0.52
SLC28A1-201ENST00000286749 POLR1AO95602 1720 aaPredicted RBP18.27■□□□□ 0.52
SLC28A1-201ENST00000286749 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.52
SLC28A1-201ENST00000286749 ROCK1Q13464 1354 aa18.27■□□□□ 0.51
SLC28A1-201ENST00000286749 ABCC5O15440 1437 aa18.26■□□□□ 0.51
SLC28A1-201ENST00000286749 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
SLC28A1-201ENST00000286749 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
SLC28A1-201ENST00000286749 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
SLC28A1-201ENST00000286749 CDK11AQ9UQ88 783 aaPredicted RBP18.24■□□□□ 0.51
SLC28A1-201ENST00000286749 KIAA0556O60303 1618 aa18.22■□□□□ 0.51
SLC28A1-201ENST00000286749 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
SLC28A1-201ENST00000286749 MSH5O43196 834 aa18.21■□□□□ 0.51
SLC28A1-201ENST00000286749 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
SLC28A1-201ENST00000286749 NUP153P49790 1475 aaKnown RBP18.2■□□□□ 0.5
SLC28A1-201ENST00000286749 SPATA31E1Q6ZUB1 1445 aa18.2■□□□□ 0.5
SLC28A1-201ENST00000286749 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
SLC28A1-201ENST00000286749 RAPGEF6Q8TEU7 1601 aa18.19■□□□□ 0.5
SLC28A1-201ENST00000286749 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
SLC28A1-201ENST00000286749 PPP4R2Q9NY27 417 aa18.19■□□□□ 0.5
SLC28A1-201ENST00000286749 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
SLC28A1-201ENST00000286749 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
SLC28A1-201ENST00000286749 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
SLC28A1-201ENST00000286749 PZPP20742 1482 aa18.16■□□□□ 0.5
SLC28A1-201ENST00000286749 FANCIQ9NVI1 1328 aa18.16■□□□□ 0.5
SLC28A1-201ENST00000286749 KIAA0586Q9BVV6 1533 aa18.16■□□□□ 0.5
SLC28A1-201ENST00000286749 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
SLC28A1-201ENST00000286749 CAMSAP2Q08AD1 1489 aa18.13■□□□□ 0.49
SLC28A1-201ENST00000286749 ITSN2Q9NZM3 1697 aa18.12■□□□□ 0.49
SLC28A1-201ENST00000286749 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
SLC28A1-201ENST00000286749 BCORL1Q5H9F3 1711 aa18.1■□□□□ 0.49
SLC28A1-201ENST00000286749 MBD5Q9P267 1494 aa18.1■□□□□ 0.49
SLC28A1-201ENST00000286749 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
SLC28A1-201ENST00000286749 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
SLC28A1-201ENST00000286749 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
SLC28A1-201ENST00000286749 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
SLC28A1-201ENST00000286749 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.49
SLC28A1-201ENST00000286749 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
SLC28A1-201ENST00000286749 KIF14Q15058 1648 aa18.08■□□□□ 0.48
SLC28A1-201ENST00000286749 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
SLC28A1-201ENST00000286749 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
SLC28A1-201ENST00000286749 ZNF326Q5BKZ1 582 aaKnown RBP18.07■□□□□ 0.48
SLC28A1-201ENST00000286749 KIAA1107Q9UPP5 1409 aa18.07■□□□□ 0.48
SLC28A1-201ENST00000286749 USP47Q96K76 1375 aa18.07■□□□□ 0.48
SLC28A1-201ENST00000286749 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
SLC28A1-201ENST00000286749 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
SLC28A1-201ENST00000286749 ZNF777Q9ULD5 760 aaPredicted RBP18.05■□□□□ 0.48
SLC28A1-201ENST00000286749 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
SLC28A1-201ENST00000286749 KDM5CP41229 1560 aa18.04■□□□□ 0.48
SLC28A1-201ENST00000286749 ADCY10Q96PN6 1610 aa18.04■□□□□ 0.48
SLC28A1-201ENST00000286749 ADGRL2O95490 1459 aa18.04■□□□□ 0.48
SLC28A1-201ENST00000286749 ERICH6Q7L0X2 663 aa18.03■□□□□ 0.48
SLC28A1-201ENST00000286749 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
SLC28A1-201ENST00000286749 PKD2Q13563 968 aa18.03■□□□□ 0.48
SLC28A1-201ENST00000286749 SMG6Q86US8 1419 aaKnown RBP18.02■□□□□ 0.47
SLC28A1-201ENST00000286749 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
SLC28A1-201ENST00000286749 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
SLC28A1-201ENST00000286749 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
SLC28A1-201ENST00000286749 ANKRD50Q9ULJ7 1429 aa17.97■□□□□ 0.47
SLC28A1-201ENST00000286749 NUDCQ9Y266 331 aa17.97■□□□□ 0.47
SLC28A1-201ENST00000286749 CDC42BPAQ5VT25 1732 aa17.96■□□□□ 0.47
SLC28A1-201ENST00000286749 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
SLC28A1-201ENST00000286749 ARID4BQ4LE39 1312 aaPredicted RBP17.95■□□□□ 0.46
SLC28A1-201ENST00000286749 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
SLC28A1-201ENST00000286749 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
SLC28A1-201ENST00000286749 NUP155O75694 1391 aa17.93■□□□□ 0.46
SLC28A1-201ENST00000286749 ROCK2O75116 1388 aaKnown RBP17.92■□□□□ 0.46
SLC28A1-201ENST00000286749 MAGI1Q96QZ7 1491 aaPredicted RBP17.92■□□□□ 0.46
SLC28A1-201ENST00000286749 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
SLC28A1-201ENST00000286749 PNISRQ8TF01 805 aaKnown RBP17.91■□□□□ 0.46
SLC28A1-201ENST00000286749 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
SLC28A1-201ENST00000286749 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
SLC28A1-201ENST00000286749 ARHGEF12Q9NZN5 1544 aa17.91■□□□□ 0.46
SLC28A1-201ENST00000286749 C9orf84Q5VXU9 1444 aa17.91■□□□□ 0.46
SLC28A1-201ENST00000286749 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
SLC28A1-201ENST00000286749 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.46
SLC28A1-201ENST00000286749 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
SLC28A1-201ENST00000286749 SYNJ2O15056 1496 aa17.89■□□□□ 0.45
SLC28A1-201ENST00000286749 FBLN2P98095 1184 aa17.88■□□□□ 0.45
SLC28A1-201ENST00000286749 CCDC136Q96JN2 1154 aa17.88■□□□□ 0.45
SLC28A1-201ENST00000286749 KDM2AQ9Y2K7 1162 aa17.88■□□□□ 0.45
SLC28A1-201ENST00000286749 KIF15Q9NS87 1388 aa17.88■□□□□ 0.45
SLC28A1-201ENST00000286749 ABCC10Q5T3U5 1492 aa17.87■□□□□ 0.45
SLC28A1-201ENST00000286749 KDM5DQ9BY66 1539 aa17.87■□□□□ 0.45
SLC28A1-201ENST00000286749 ST20-MTHFSA0A0A6YYL1 179 aa17.86■□□□□ 0.45
SLC28A1-201ENST00000286749 E9PCH4 1651 aa17.86■□□□□ 0.45
SLC28A1-201ENST00000286749 PLEKHD1A6NEE1 506 aa17.85■□□□□ 0.45
SLC28A1-201ENST00000286749 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
SLC28A1-201ENST00000286749 ABCA8O94911 1581 aa17.85■□□□□ 0.45
SLC28A1-201ENST00000286749 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
SLC28A1-201ENST00000286749 LRPPRCP42704 1394 aaKnown RBP17.83■□□□□ 0.44
SLC28A1-201ENST00000286749 ATP10BO94823 1461 aa17.83■□□□□ 0.44
SLC28A1-201ENST00000286749 TSPY4P0CV99 314 aa17.83■□□□□ 0.44
SLC28A1-201ENST00000286749 TSPY10P0CW01 314 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms