RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CECR2Q9BXF3 1484 aa20.98■□□□□ 0.95
SH3RF1-201ENST00000284637 OS9Q13438 667 aaPredicted RBP20.96■□□□□ 0.95
SH3RF1-201ENST00000284637 KCNJ4P48050 445 aa20.95■□□□□ 0.94
SH3RF1-201ENST00000284637 FGD1P98174 961 aa20.95■□□□□ 0.94
SH3RF1-201ENST00000284637 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
SH3RF1-201ENST00000284637 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
SH3RF1-201ENST00000284637 PKD2Q13563 968 aa20.94■□□□□ 0.94
SH3RF1-201ENST00000284637 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
SH3RF1-201ENST00000284637 GSE1Q14687 1217 aa20.93■□□□□ 0.94
SH3RF1-201ENST00000284637 ANO8Q9HCE9 1232 aaPredicted RBP20.92■□□□□ 0.94
SH3RF1-201ENST00000284637 GOLGA6L4A6NEF3 574 aa20.91■□□□□ 0.94
SH3RF1-201ENST00000284637 NAP1L2Q9ULW6 460 aaPredicted RBP20.9■□□□□ 0.94
SH3RF1-201ENST00000284637 APBB1O00213 710 aa20.89■□□□□ 0.93
SH3RF1-201ENST00000284637 GOLGA6L3A6NEY3 463 aa20.89■□□□□ 0.93
SH3RF1-201ENST00000284637 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
SH3RF1-201ENST00000284637 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
SH3RF1-201ENST00000284637 MPHOSPH9Q99550 1183 aa20.88■□□□□ 0.93
SH3RF1-201ENST00000284637 CHAF1AQ13111 956 aaPredicted RBP20.87■□□□□ 0.93
SH3RF1-201ENST00000284637 CUX2O14529 1486 aa20.87■□□□□ 0.93
SH3RF1-201ENST00000284637 GOLGA6L6A8MZA4 724 aa20.86■□□□□ 0.93
SH3RF1-201ENST00000284637 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
SH3RF1-201ENST00000284637 SRPK2P78362 688 aaKnown RBP20.85■□□□□ 0.93
SH3RF1-201ENST00000284637 RALBP1Q15311 655 aa20.85■□□□□ 0.93
SH3RF1-201ENST00000284637 SOX12O15370 315 aa20.85■□□□□ 0.93
SH3RF1-201ENST00000284637 CCDC88BA6NC98 1476 aa20.84■□□□□ 0.93
SH3RF1-201ENST00000284637 ABCC8Q09428 1581 aa20.84■□□□□ 0.93
SH3RF1-201ENST00000284637 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
SH3RF1-201ENST00000284637 ARID3AQ99856 593 aa20.83■□□□□ 0.93
SH3RF1-201ENST00000284637 GBP4Q96PP9 640 aa20.83■□□□□ 0.93
SH3RF1-201ENST00000284637 NRDCO43847 1150 aa20.83■□□□□ 0.92
SH3RF1-201ENST00000284637 RWDD1Q9H446 243 aaPredicted RBP20.82■□□□□ 0.92
SH3RF1-201ENST00000284637 MCCP23508 829 aa20.82■□□□□ 0.92
SH3RF1-201ENST00000284637 AMER1Q5JTC6 1135 aaPredicted RBP20.82■□□□□ 0.92
SH3RF1-201ENST00000284637 L3MBTL2Q969R5 705 aa20.82■□□□□ 0.92
SH3RF1-201ENST00000284637 PKNOX2Q96KN3 472 aa20.81■□□□□ 0.92
SH3RF1-201ENST00000284637 TULP1O00294 542 aaPredicted RBP20.81■□□□□ 0.92
SH3RF1-201ENST00000284637 ITPRIPQ8IWB1 547 aa20.81■□□□□ 0.92
SH3RF1-201ENST00000284637 DRC7Q8IY82 874 aa20.81■□□□□ 0.92
SH3RF1-201ENST00000284637 U2AF1L5P0DN76 240 aaPredicted RBP20.8■□□□□ 0.92
SH3RF1-201ENST00000284637 HAP1P54257 671 aaPredicted RBP20.8■□□□□ 0.92
SH3RF1-201ENST00000284637 U2AF1Q01081 240 aaKnown RBP eCLIP20.8■□□□□ 0.92
SH3RF1-201ENST00000284637 EIF4G1Q04637 1599 aaKnown RBP20.79■□□□□ 0.92
SH3RF1-201ENST00000284637 MFAP1P55081 439 aaKnown RBP20.79■□□□□ 0.92
SH3RF1-201ENST00000284637 IPO8O15397 1037 aaKnown RBP20.79■□□□□ 0.92
SH3RF1-201ENST00000284637 ROCK2O75116 1388 aaKnown RBP20.79■□□□□ 0.92
SH3RF1-201ENST00000284637 PTMSP20962 102 aa20.78■□□□□ 0.92
SH3RF1-201ENST00000284637 CLUAP1Q96AJ1 413 aa20.76■□□□□ 0.91
SH3RF1-201ENST00000284637 NACADO15069 1562 aa20.75■□□□□ 0.91
SH3RF1-201ENST00000284637 GOLGA2Q08379 1002 aa20.74■□□□□ 0.91
SH3RF1-201ENST00000284637 STK26Q9P289 416 aa20.73■□□□□ 0.91
SH3RF1-201ENST00000284637 CCDC146Q8IYE0 955 aa20.73■□□□□ 0.91
SH3RF1-201ENST00000284637 CFAP44Q96MT7 982 aa20.73■□□□□ 0.91
SH3RF1-201ENST00000284637 NUP155O75694 1391 aa20.72■□□□□ 0.91
SH3RF1-201ENST00000284637 SLC4A3P48751 1232 aa20.71■□□□□ 0.91
SH3RF1-201ENST00000284637 NLRP13Q86W25 1043 aa20.71■□□□□ 0.91
SH3RF1-201ENST00000284637 KANK1Q14678 1352 aa20.71■□□□□ 0.91
SH3RF1-201ENST00000284637 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
SH3RF1-201ENST00000284637 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.91
SH3RF1-201ENST00000284637 FOXD4L1Q9NU39 408 aa20.7■□□□□ 0.9
SH3RF1-201ENST00000284637 PDE4AP27815 886 aa20.69■□□□□ 0.9
SH3RF1-201ENST00000284637 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
SH3RF1-201ENST00000284637 SMC4Q9NTJ3 1288 aa20.68■□□□□ 0.9
SH3RF1-201ENST00000284637 FMN1Q68DA7 1419 aa20.68■□□□□ 0.9
SH3RF1-201ENST00000284637 KIAA1211Q6ZU35 1233 aa20.68■□□□□ 0.9
SH3RF1-201ENST00000284637 PDE3BQ13370 1112 aa20.67■□□□□ 0.9
SH3RF1-201ENST00000284637 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
SH3RF1-201ENST00000284637 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
SH3RF1-201ENST00000284637 PLIN1O60240 522 aa20.65■□□□□ 0.9
SH3RF1-201ENST00000284637 GGT6Q6P531 493 aa20.65■□□□□ 0.9
SH3RF1-201ENST00000284637 CENPJQ9HC77 1338 aaPredicted RBP20.63■□□□□ 0.89
SH3RF1-201ENST00000284637 EXOC6Q8TAG9 804 aa20.63■□□□□ 0.89
SH3RF1-201ENST00000284637 IL27Q8NEV9 243 aa20.63■□□□□ 0.89
SH3RF1-201ENST00000284637 TNNT3P45378 269 aaPredicted RBP20.62■□□□□ 0.89
SH3RF1-201ENST00000284637 HDGFL2Q7Z4V5 671 aaPredicted RBP20.62■□□□□ 0.89
SH3RF1-201ENST00000284637 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
SH3RF1-201ENST00000284637 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
SH3RF1-201ENST00000284637 MLECQ14165 292 aa20.6■□□□□ 0.89
SH3RF1-201ENST00000284637 SYAP1Q96A49 352 aaPredicted RBP20.59■□□□□ 0.89
SH3RF1-201ENST00000284637 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
SH3RF1-201ENST00000284637 ANKRD30AQ9BXX3 1397 aa20.57■□□□□ 0.88
SH3RF1-201ENST00000284637 ST20-MTHFSA0A0A6YYL1 179 aa20.57■□□□□ 0.88
SH3RF1-201ENST00000284637 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
SH3RF1-201ENST00000284637 GNL2Q13823 731 aaKnown RBP20.55■□□□□ 0.88
SH3RF1-201ENST00000284637 RRP7AQ9Y3A4 280 aaKnown RBP20.55■□□□□ 0.88
SH3RF1-201ENST00000284637 MYBBP1AQ9BQG0 1328 aaKnown RBP20.55■□□□□ 0.88
SH3RF1-201ENST00000284637 RRP1P56182 461 aaKnown RBP20.55■□□□□ 0.88
SH3RF1-201ENST00000284637 ZBED9Q6R2W3 1325 aa20.55■□□□□ 0.88
SH3RF1-201ENST00000284637 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
SH3RF1-201ENST00000284637 NPHP1O15259 732 aa20.55■□□□□ 0.88
SH3RF1-201ENST00000284637 CENPQQ7L2Z9 268 aaPredicted RBP20.54■□□□□ 0.88
SH3RF1-201ENST00000284637 BCL2L13Q9BXK5 485 aa20.54■□□□□ 0.88
SH3RF1-201ENST00000284637 CRBNQ96SW2 442 aa20.54■□□□□ 0.88
SH3RF1-201ENST00000284637 FOXD4L5Q5VV16 416 aaPredicted RBP20.53■□□□□ 0.88
SH3RF1-201ENST00000284637 FOXD4L4Q8WXT5 416 aaPredicted RBP20.53■□□□□ 0.88
SH3RF1-201ENST00000284637 KIF15Q9NS87 1388 aa20.53■□□□□ 0.88
SH3RF1-201ENST00000284637 DDX11L8A8MPP1 907 aa20.52■□□□□ 0.88
SH3RF1-201ENST00000284637 FHOD3Q2V2M9 1422 aa20.51■□□□□ 0.87
SH3RF1-201ENST00000284637 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
SH3RF1-201ENST00000284637 PANK3Q9H999 370 aa20.51■□□□□ 0.87
SH3RF1-201ENST00000284637 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms