RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 RRP7BPQ9NSQ0 103 aa19.42■□□□□ 0.7
LPCAT1-201ENST00000283415 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
LPCAT1-201ENST00000283415 ADGBQ8N7X0 1667 aa19.42■□□□□ 0.7
LPCAT1-201ENST00000283415 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
LPCAT1-201ENST00000283415 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
LPCAT1-201ENST00000283415 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
LPCAT1-201ENST00000283415 ANP32CO43423 234 aa19.36■□□□□ 0.69
LPCAT1-201ENST00000283415 DAPK1P53355 1430 aa19.33■□□□□ 0.68
LPCAT1-201ENST00000283415 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
LPCAT1-201ENST00000283415 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
LPCAT1-201ENST00000283415 TEX14Q8IWB6 1497 aa19.31■□□□□ 0.68
LPCAT1-201ENST00000283415 MYT1LQ9UL68 1186 aa19.31■□□□□ 0.68
LPCAT1-201ENST00000283415 ABCC5O15440 1437 aa19.31■□□□□ 0.68
LPCAT1-201ENST00000283415 NUP160Q12769 1436 aa19.31■□□□□ 0.68
LPCAT1-201ENST00000283415 ADGRL2O95490 1459 aa19.31■□□□□ 0.68
LPCAT1-201ENST00000283415 CDC42BPAQ5VT25 1732 aa19.29■□□□□ 0.68
LPCAT1-201ENST00000283415 ABCA8O94911 1581 aa19.29■□□□□ 0.68
LPCAT1-201ENST00000283415 KIF14Q15058 1648 aa19.28■□□□□ 0.68
LPCAT1-201ENST00000283415 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
LPCAT1-201ENST00000283415 MBD5Q9P267 1494 aa19.27■□□□□ 0.68
LPCAT1-201ENST00000283415 CCER2I3L3R5 266 aa19.27■□□□□ 0.67
LPCAT1-201ENST00000283415 SUPT16HQ9Y5B9 1047 aaKnown RBP19.27■□□□□ 0.67
LPCAT1-201ENST00000283415 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
LPCAT1-201ENST00000283415 RPRD2Q5VT52 1461 aaKnown RBP19.26■□□□□ 0.67
LPCAT1-201ENST00000283415 PZPP20742 1482 aa19.23■□□□□ 0.67
LPCAT1-201ENST00000283415 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
LPCAT1-201ENST00000283415 SPATA31E1Q6ZUB1 1445 aa19.22■□□□□ 0.67
LPCAT1-201ENST00000283415 KDM5DQ9BY66 1539 aa19.2■□□□□ 0.66
LPCAT1-201ENST00000283415 ABCC10Q5T3U5 1492 aa19.2■□□□□ 0.66
LPCAT1-201ENST00000283415 TROQ12816 1431 aaPredicted RBP19.2■□□□□ 0.66
LPCAT1-201ENST00000283415 GPATCH8Q9UKJ3 1502 aaKnown RBP19.2■□□□□ 0.66
LPCAT1-201ENST00000283415 CAMSAP2Q08AD1 1489 aa19.2■□□□□ 0.66
LPCAT1-201ENST00000283415 FOXD1Q16676 465 aa19.2■□□□□ 0.66
LPCAT1-201ENST00000283415 HNRNPUQ00839 825 aaKnown RBP eCLIP19.18■□□□□ 0.66
LPCAT1-201ENST00000283415 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
LPCAT1-201ENST00000283415 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
LPCAT1-201ENST00000283415 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
LPCAT1-201ENST00000283415 PLB1Q6P1J6 1458 aa19.14■□□□□ 0.65
LPCAT1-201ENST00000283415 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
LPCAT1-201ENST00000283415 ARHGEF5Q12774 1597 aa19.12■□□□□ 0.65
LPCAT1-201ENST00000283415 SALL2Q9Y467 1007 aaPredicted RBP19.12■□□□□ 0.65
LPCAT1-201ENST00000283415 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
LPCAT1-201ENST00000283415 MPHOSPH9Q99550 1183 aa19.11■□□□□ 0.65
LPCAT1-201ENST00000283415 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
LPCAT1-201ENST00000283415 WASHC2AQ641Q2 1341 aa19.09■□□□□ 0.65
LPCAT1-201ENST00000283415 CDC42BPBQ9Y5S2 1711 aa19.09■□□□□ 0.65
LPCAT1-201ENST00000283415 BCORL1Q5H9F3 1711 aa19.08■□□□□ 0.64
LPCAT1-201ENST00000283415 KDM5CP41229 1560 aa19.07■□□□□ 0.64
LPCAT1-201ENST00000283415 PTPRGP23470 1445 aa19.06■□□□□ 0.64
LPCAT1-201ENST00000283415 PREX2Q70Z35 1606 aa19.06■□□□□ 0.64
LPCAT1-201ENST00000283415 CNTLNQ9NXG0 1405 aa19.05■□□□□ 0.64
LPCAT1-201ENST00000283415 ATP10BO94823 1461 aa19.03■□□□□ 0.64
LPCAT1-201ENST00000283415 UHRF1BP1Q6BDS2 1440 aa19.03■□□□□ 0.64
LPCAT1-201ENST00000283415 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
LPCAT1-201ENST00000283415 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
LPCAT1-201ENST00000283415 E9PCH4 1651 aa19.03■□□□□ 0.64
LPCAT1-201ENST00000283415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.646e-10■■□□□ 11.5
LPCAT1-201ENST00000283415 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
LPCAT1-201ENST00000283415 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
LPCAT1-201ENST00000283415 ARHGEF12Q9NZN5 1544 aa19■□□□□ 0.63
LPCAT1-201ENST00000283415 SAMD9LQ8IVG5 1584 aa19■□□□□ 0.63
LPCAT1-201ENST00000283415 HSPA5P11021 654 aaKnown RBP18.99■□□□□ 0.63
LPCAT1-201ENST00000283415 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
LPCAT1-201ENST00000283415 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
LPCAT1-201ENST00000283415 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
LPCAT1-201ENST00000283415 CHD1O14646 1710 aa18.98■□□□□ 0.63
LPCAT1-201ENST00000283415 UNC13BO14795 1591 aa18.98■□□□□ 0.63
LPCAT1-201ENST00000283415 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
LPCAT1-201ENST00000283415 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
LPCAT1-201ENST00000283415 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
LPCAT1-201ENST00000283415 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
LPCAT1-201ENST00000283415 CARMIL2Q6F5E8 1435 aa18.96■□□□□ 0.63
LPCAT1-201ENST00000283415 TSHZ2Q9NRE2 1034 aa18.96■□□□□ 0.63
LPCAT1-201ENST00000283415 ERCC6Q03468 1493 aa18.93■□□□□ 0.62
LPCAT1-201ENST00000283415 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
LPCAT1-201ENST00000283415 PLXNC1O60486 1568 aa18.92■□□□□ 0.62
LPCAT1-201ENST00000283415 LAMC1P11047 1609 aa18.92■□□□□ 0.62
LPCAT1-201ENST00000283415 RALGAPBQ86X10 1494 aa18.92■□□□□ 0.62
LPCAT1-201ENST00000283415 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
LPCAT1-201ENST00000283415 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
LPCAT1-201ENST00000283415 MAGI2Q86UL8 1455 aa18.88■□□□□ 0.61
LPCAT1-201ENST00000283415 EIF4G2P78344 907 aaKnown RBP eCLIP18.88■□□□□ 0.613e-6■■■■■ 33.2
LPCAT1-201ENST00000283415 TRPM1Q7Z4N2 1603 aa18.88■□□□□ 0.61
LPCAT1-201ENST00000283415 TTC37Q6PGP7 1564 aa18.87■□□□□ 0.61
LPCAT1-201ENST00000283415 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
LPCAT1-201ENST00000283415 C9orf84Q5VXU9 1444 aa18.87■□□□□ 0.61
LPCAT1-201ENST00000283415 IQGAP3Q86VI3 1631 aa18.87■□□□□ 0.61
LPCAT1-201ENST00000283415 ANKRD50Q9ULJ7 1429 aa18.87■□□□□ 0.61
LPCAT1-201ENST00000283415 ANP32EQ9BTT0 268 aa18.86■□□□□ 0.61
LPCAT1-201ENST00000283415 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
LPCAT1-201ENST00000283415 ANKRD30AQ9BXX3 1397 aa18.85■□□□□ 0.61
LPCAT1-201ENST00000283415 MYO5CQ9NQX4 1742 aa18.84■□□□□ 0.61
LPCAT1-201ENST00000283415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.616e-6■■■■■ 38.2
LPCAT1-201ENST00000283415 KIF7Q2M1P5 1343 aa18.82■□□□□ 0.6
LPCAT1-201ENST00000283415 FAM135AQ9P2D6 1515 aa18.81■□□□□ 0.6
LPCAT1-201ENST00000283415 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
LPCAT1-201ENST00000283415 PRKRIP1Q9H875 184 aaPredicted RBP18.8■□□□□ 0.6
LPCAT1-201ENST00000283415 NBR1Q14596 966 aa18.8■□□□□ 0.6
LPCAT1-201ENST00000283415 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
LPCAT1-201ENST00000283415 CCDC141Q6ZP82 1450 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms