RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 TTC37Q6PGP7 1564 aa19.65■□□□□ 0.74
ACER3-201ENST00000278544 TSPY4P0CV99 314 aa19.65■□□□□ 0.74
ACER3-201ENST00000278544 TSPY10P0CW01 314 aa19.65■□□□□ 0.74
ACER3-201ENST00000278544 ABCC10Q5T3U5 1492 aa19.64■□□□□ 0.74
ACER3-201ENST00000278544 AFAP1Q8N556 730 aa19.64■□□□□ 0.73
ACER3-201ENST00000278544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.64■□□□□ 0.73
ACER3-201ENST00000278544 UHRF1BP1LA0JNW5 1464 aa19.63■□□□□ 0.73
ACER3-201ENST00000278544 FOXD1Q16676 465 aa19.63■□□□□ 0.73
ACER3-201ENST00000278544 MIA2Q96PC5 1412 aa19.63■□□□□ 0.73
ACER3-201ENST00000278544 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
ACER3-201ENST00000278544 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
ACER3-201ENST00000278544 ABCC5O15440 1437 aa19.62■□□□□ 0.73
ACER3-201ENST00000278544 FAM69CQ0P6D2 419 aa19.62■□□□□ 0.73
ACER3-201ENST00000278544 DAPK1P53355 1430 aa19.6■□□□□ 0.73
ACER3-201ENST00000278544 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
ACER3-201ENST00000278544 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
ACER3-201ENST00000278544 DHX57Q6P158 1386 aaKnown RBP19.58■□□□□ 0.73
ACER3-201ENST00000278544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.72
ACER3-201ENST00000278544 NAIPQ13075 1403 aa19.55■□□□□ 0.72
ACER3-201ENST00000278544 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
ACER3-201ENST00000278544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.726e-7■■■□□ 19.2
ACER3-201ENST00000278544 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
ACER3-201ENST00000278544 RAPGEF3O95398 923 aa19.52■□□□□ 0.72
ACER3-201ENST00000278544 SYCP2Q9BX26 1530 aa19.52■□□□□ 0.71
ACER3-201ENST00000278544 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
ACER3-201ENST00000278544 PLCH2O75038 1416 aa19.51■□□□□ 0.71
ACER3-201ENST00000278544 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
ACER3-201ENST00000278544 TRHP20396 242 aaPredicted RBP19.5■□□□□ 0.71
ACER3-201ENST00000278544 CD109Q6YHK3 1445 aa19.5■□□□□ 0.71
ACER3-201ENST00000278544 KDM6BO15054 1643 aa19.49■□□□□ 0.71
ACER3-201ENST00000278544 SAMD9LQ8IVG5 1584 aa19.49■□□□□ 0.71
ACER3-201ENST00000278544 HFM1A2PYH4 1435 aa19.49■□□□□ 0.71
ACER3-201ENST00000278544 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
ACER3-201ENST00000278544 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
ACER3-201ENST00000278544 FANCAO15360 1455 aa19.47■□□□□ 0.71
ACER3-201ENST00000278544 ARHGEF12Q9NZN5 1544 aa19.47■□□□□ 0.71
ACER3-201ENST00000278544 SLC4A1APQ9BWU0 796 aaKnown RBP19.46■□□□□ 0.71
ACER3-201ENST00000278544 SCAPERQ9BY12 1400 aa19.45■□□□□ 0.7
ACER3-201ENST00000278544 ANKRD30AQ9BXX3 1397 aa19.45■□□□□ 0.7
ACER3-201ENST00000278544 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
ACER3-201ENST00000278544 NCOA1Q15788 1441 aa19.44■□□□□ 0.7
ACER3-201ENST00000278544 MYO5CQ9NQX4 1742 aa19.44■□□□□ 0.7
ACER3-201ENST00000278544 PREX2Q70Z35 1606 aa19.44■□□□□ 0.7
ACER3-201ENST00000278544 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
ACER3-201ENST00000278544 MBD5Q9P267 1494 aa19.44■□□□□ 0.7
ACER3-201ENST00000278544 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
ACER3-201ENST00000278544 AKNAQ7Z591 1439 aa19.43■□□□□ 0.7
ACER3-201ENST00000278544 MPHOSPH9Q99550 1183 aa19.42■□□□□ 0.7
ACER3-201ENST00000278544 ADGRL1O94910 1474 aa19.4■□□□□ 0.7
ACER3-201ENST00000278544 CCDC141Q6ZP82 1450 aa19.4■□□□□ 0.7
ACER3-201ENST00000278544 TSPOAP1O95153 1857 aa19.39■□□□□ 0.69
ACER3-201ENST00000278544 ANKRD50Q9ULJ7 1429 aa19.38■□□□□ 0.69
ACER3-201ENST00000278544 NUP155O75694 1391 aa19.37■□□□□ 0.69
ACER3-201ENST00000278544 PKD2Q13563 968 aa19.35■□□□□ 0.69
ACER3-201ENST00000278544 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
ACER3-201ENST00000278544 KIF3BO15066 747 aa19.34■□□□□ 0.69
ACER3-201ENST00000278544 ROCK1Q13464 1354 aa19.33■□□□□ 0.68
ACER3-201ENST00000278544 MAPKBP1O60336 1514 aa19.32■□□□□ 0.68
ACER3-201ENST00000278544 ABCA9Q8IUA7 1624 aa19.32■□□□□ 0.68
ACER3-201ENST00000278544 GGT6Q6P531 493 aa19.31■□□□□ 0.68
ACER3-201ENST00000278544 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
ACER3-201ENST00000278544 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
ACER3-201ENST00000278544 ABCC1P33527 1531 aa19.29■□□□□ 0.68
ACER3-201ENST00000278544 HIRIP3Q9BW71 556 aaPredicted RBP19.29■□□□□ 0.68
ACER3-201ENST00000278544 KIAA1107Q9UPP5 1409 aa19.28■□□□□ 0.68
ACER3-201ENST00000278544 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
ACER3-201ENST00000278544 MLECQ14165 292 aa19.27■□□□□ 0.68
ACER3-201ENST00000278544 CROCC2H7BZ55 1655 aa19.23■□□□□ 0.67
ACER3-201ENST00000278544 GCC2Q8IWJ2 1684 aa19.23■□□□□ 0.67
ACER3-201ENST00000278544 ARHGEF5Q12774 1597 aa19.23■□□□□ 0.67
ACER3-201ENST00000278544 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
ACER3-201ENST00000278544 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
ACER3-201ENST00000278544 ADGRL2O95490 1459 aa19.22■□□□□ 0.67
ACER3-201ENST00000278544 RGL3Q3MIN7 710 aa19.22■□□□□ 0.67
ACER3-201ENST00000278544 TONSLQ96HA7 1378 aa19.21■□□□□ 0.67
ACER3-201ENST00000278544 DENND4BO75064 1496 aaPredicted RBP19.21■□□□□ 0.67
ACER3-201ENST00000278544 SHANK2Q9UPX8 1470 aa19.2■□□□□ 0.66
ACER3-201ENST00000278544 ADGBQ8N7X0 1667 aa19.2■□□□□ 0.66
ACER3-201ENST00000278544 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
ACER3-201ENST00000278544 KDM2AQ9Y2K7 1162 aa19.19■□□□□ 0.66
ACER3-201ENST00000278544 CLSPNQ9HAW4 1339 aa19.18■□□□□ 0.66
ACER3-201ENST00000278544 PZPP20742 1482 aa19.16■□□□□ 0.66
ACER3-201ENST00000278544 YEATS2Q9ULM3 1422 aa19.16■□□□□ 0.66
ACER3-201ENST00000278544 L3MBTL2Q969R5 705 aa19.15■□□□□ 0.66
ACER3-201ENST00000278544 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
ACER3-201ENST00000278544 POGZQ7Z3K3 1410 aa19.15■□□□□ 0.66
ACER3-201ENST00000278544 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
ACER3-201ENST00000278544 ZFYVE16Q7Z3T8 1539 aa19.13■□□□□ 0.65
ACER3-201ENST00000278544 ARID4BQ4LE39 1312 aaPredicted RBP19.13■□□□□ 0.65
ACER3-201ENST00000278544 COL17A1Q9UMD9 1497 aaPredicted RBP19.12■□□□□ 0.65
ACER3-201ENST00000278544 ARAP3Q8WWN8 1544 aa19.12■□□□□ 0.65
ACER3-201ENST00000278544 CHGAP10645 457 aaKnown RBP19.1■□□□□ 0.65
ACER3-201ENST00000278544 ANKRD30BQ9BXX2 1392 aa19.09■□□□□ 0.65
ACER3-201ENST00000278544 MAP3K4Q9Y6R4 1608 aa19.09■□□□□ 0.65
ACER3-201ENST00000278544 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.65
ACER3-201ENST00000278544 DUOX2Q9NRD8 1548 aa19.08■□□□□ 0.65
ACER3-201ENST00000278544 NEO1Q92859 1461 aa19.08■□□□□ 0.65
ACER3-201ENST00000278544 WASHC2CQ9Y4E1 1318 aa19.08■□□□□ 0.64
ACER3-201ENST00000278544 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.64
ACER3-201ENST00000278544 CFAP65Q6ZU64 1925 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms