RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.74□□□□□ -0.052e-29■■■■■ 310.5
ACER3-201ENST00000278544 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.076e-28■■■■■ 106.4
ACER3-201ENST00000278544 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.457e-25■■■■■ 56.8
ACER3-201ENST00000278544 DDX3XO00571 662 aaKnown RBP eCLIP14.28□□□□□ -0.123e-17■■■■■ 71.6
ACER3-201ENST00000278544 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.992e-12■■■■■ 32.2
ACER3-201ENST00000278544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.55■□□□□ 0.083e-9■■■■□ 23.2
ACER3-201ENST00000278544 EFTUD2Q15029 972 aaKnown RBP eCLIP13.6□□□□□ -0.234e-8■■■■■ 42.6
ACER3-201ENST00000278544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■■■■■ 26.9
ACER3-201ENST00000278544 NOLC1Q14978 699 aaKnown RBP eCLIP14.46□□□□□ -0.12e-7■■■■■ 40.8
ACER3-201ENST00000278544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.9□□□□□ -0.182e-7■□□□□ 8.7
ACER3-201ENST00000278544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.726e-7■■■□□ 19.2
ACER3-201ENST00000278544 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■■■■ 28.9
ACER3-201ENST00000278544 TROVE2P10155 538 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■□□□□ 8.4
ACER3-201ENST00000278544 HNRNPMP52272 730 aaKnown RBP eCLIP19.84■□□□□ 0.771e-6■■■■■ 27.5
ACER3-201ENST00000278544 SF3B4Q15427 424 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■■■■ 28.8
ACER3-201ENST00000278544 U2AF2P26368 475 aaKnown RBP eCLIP15.25■□□□□ 0.033e-6■■■□□ 15.4
ACER3-201ENST00000278544 SF3B1O75533 1304 aaKnown RBP eCLIP13.96□□□□□ -0.173e-6■■■■■ 110.9
ACER3-201ENST00000278544 KHSRPQ92945 711 aaKnown RBP eCLIP13.97□□□□□ -0.178e-6■■■□□ 18.5
Retrieved 18 of 18 RNA–protein pairs in 6.1 ms