RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 BCORL1Q5H9F3 1711 aa28.49■■■□□ 2.15
CSNK1D-201ENST00000269361 KIF14Q15058 1648 aa28.49■■■□□ 2.15
CSNK1D-201ENST00000269361 ZFYVE16Q7Z3T8 1539 aa28.48■■■□□ 2.15
CSNK1D-201ENST00000269361 CCDC18Q5T9S5 1454 aa28.44■■■□□ 2.14
CSNK1D-201ENST00000269361 MADDQ8WXG6 1647 aa28.43■■■□□ 2.14
CSNK1D-201ENST00000269361 MYO5CQ9NQX4 1742 aa28.43■■■□□ 2.14
CSNK1D-201ENST00000269361 PCF11O94913 1555 aaKnown RBP28.42■■■□□ 2.14
CSNK1D-201ENST00000269361 ARHGAP5Q13017 1502 aa28.42■■■□□ 2.14
CSNK1D-201ENST00000269361 LRRIQ1Q96JM4 1722 aa28.41■■■□□ 2.14
CSNK1D-201ENST00000269361 AFAP1Q8N556 730 aa28.39■■■□□ 2.14
CSNK1D-201ENST00000269361 MLECQ14165 292 aa28.37■■■□□ 2.13
CSNK1D-201ENST00000269361 ATP10AO60312 1499 aa28.37■■■□□ 2.13
CSNK1D-201ENST00000269361 FYCO1Q9BQS8 1478 aa28.37■■■□□ 2.13
CSNK1D-201ENST00000269361 ZNF518AQ6AHZ1 1483 aa28.36■■■□□ 2.13
CSNK1D-201ENST00000269361 ILDR1Q86SU0 546 aaPredicted RBP28.36■■■□□ 2.13
CSNK1D-201ENST00000269361 SIGLEC1Q9BZZ2 1709 aa28.32■■■□□ 2.12
CSNK1D-201ENST00000269361 C9orf84Q5VXU9 1444 aa28.32■■■□□ 2.12
CSNK1D-201ENST00000269361 RIMS1Q86UR5 1692 aaKnown RBP28.3■■■□□ 2.12
CSNK1D-201ENST00000269361 MYT1LQ9UL68 1186 aa28.3■■■□□ 2.12
CSNK1D-201ENST00000269361 PLPPR3Q6T4P5 718 aa28.29■■■□□ 2.12
CSNK1D-201ENST00000269361 KDM5CP41229 1560 aa28.27■■■□□ 2.12
CSNK1D-201ENST00000269361 LMTK3Q96Q04 1460 aa28.26■■■□□ 2.11
CSNK1D-201ENST00000269361 CDC42BPBQ9Y5S2 1711 aa28.25■■■□□ 2.11
CSNK1D-201ENST00000269361 PREX2Q70Z35 1606 aa28.24■■■□□ 2.11
CSNK1D-201ENST00000269361 TRAPPC8Q9Y2L5 1435 aa28.24■■■□□ 2.11
CSNK1D-201ENST00000269361 ARHGEF12Q9NZN5 1544 aa28.23■■■□□ 2.11
CSNK1D-201ENST00000269361 MLH3Q9UHC1 1453 aa28.22■■■□□ 2.11
CSNK1D-201ENST00000269361 ABCC1P33527 1531 aa28.21■■■□□ 2.11
CSNK1D-201ENST00000269361 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
CSNK1D-201ENST00000269361 GPATCH8Q9UKJ3 1502 aaKnown RBP28.18■■■□□ 2.1
CSNK1D-201ENST00000269361 DIP2CQ9Y2E4 1556 aa28.16■■■□□ 2.1
CSNK1D-201ENST00000269361 HSPA2P54652 639 aa28.16■■■□□ 2.1
CSNK1D-201ENST00000269361 FER1L4A9Z1Z3 1794 aa28.14■■■□□ 2.09
CSNK1D-201ENST00000269361 CDC42BPAQ5VT25 1732 aa28.13■■■□□ 2.09
CSNK1D-201ENST00000269361 CEBPAP49715 358 aaPredicted RBP28.13■■■□□ 2.09
CSNK1D-201ENST00000269361 MTUS2Q5JR59 1369 aa28.12■■■□□ 2.09
CSNK1D-201ENST00000269361 REREQ9P2R6 1566 aa28.12■■■□□ 2.09
CSNK1D-201ENST00000269361 CFDP1Q9UEE9 299 aaPredicted RBP28.12■■■□□ 2.09
CSNK1D-201ENST00000269361 ITSN2Q9NZM3 1697 aa28.11■■■□□ 2.09
CSNK1D-201ENST00000269361 HNRNPMP52272 730 aaKnown RBP eCLIP28.11■■■□□ 2.097e-7■■■□□ 15.3
CSNK1D-201ENST00000269361 CCNB3Q8WWL7 1395 aa28.11■■■□□ 2.09
CSNK1D-201ENST00000269361 CEP162Q5TB80 1403 aa28.1■■■□□ 2.09
CSNK1D-201ENST00000269361 ABCA6Q8N139 1617 aa28.1■■■□□ 2.09
CSNK1D-201ENST00000269361 SAMD9LQ8IVG5 1584 aa28.07■■■□□ 2.08
CSNK1D-201ENST00000269361 AGLP35573 1532 aa28.07■■■□□ 2.08
CSNK1D-201ENST00000269361 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
CSNK1D-201ENST00000269361 KIAA1107Q9UPP5 1409 aa28.06■■■□□ 2.08
CSNK1D-201ENST00000269361 SYCP2Q9BX26 1530 aa28.04■■■□□ 2.08
CSNK1D-201ENST00000269361 PLEKHH2Q8IVE3 1493 aa28.03■■■□□ 2.08
CSNK1D-201ENST00000269361 ESF1Q9H501 851 aaKnown RBP28.03■■■□□ 2.08
CSNK1D-201ENST00000269361 KIDINS220Q9ULH0 1771 aa28.02■■■□□ 2.08
CSNK1D-201ENST00000269361 FBXO41Q8TF61 875 aa27.99■■■□□ 2.07
CSNK1D-201ENST00000269361 EHBP1L1Q8N3D4 1523 aa27.97■■■□□ 2.07
CSNK1D-201ENST00000269361 ZNF644Q9H582 1327 aaPredicted RBP27.96■■■□□ 2.07
CSNK1D-201ENST00000269361 LOC105371045A0A1W2PR82 267 aa27.95■■■□□ 2.06
CSNK1D-201ENST00000269361 ATP7AQ04656 1500 aa27.92■■■□□ 2.06
CSNK1D-201ENST00000269361 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
CSNK1D-201ENST00000269361 CNTLNQ9NXG0 1405 aa27.92■■■□□ 2.06
CSNK1D-201ENST00000269361 PREX1Q8TCU6 1659 aa27.91■■■□□ 2.06
CSNK1D-201ENST00000269361 TIAM1Q13009 1591 aa27.91■■■□□ 2.06
CSNK1D-201ENST00000269361 A2MP01023 1474 aa27.88■■■□□ 2.05
CSNK1D-201ENST00000269361 MBD5Q9P267 1494 aa27.88■■■□□ 2.05
CSNK1D-201ENST00000269361 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
CSNK1D-201ENST00000269361 C3P01024 1663 aa27.85■■■□□ 2.05
CSNK1D-201ENST00000269361 NCOA2Q15596 1464 aa27.84■■■□□ 2.05
CSNK1D-201ENST00000269361 DMRT2Q9Y5R5 561 aa27.83■■■□□ 2.05
CSNK1D-201ENST00000269361 ZMYM3Q14202 1370 aa27.83■■■□□ 2.05
CSNK1D-201ENST00000269361 PLXNC1O60486 1568 aa27.82■■■□□ 2.04
CSNK1D-201ENST00000269361 GGT6Q6P531 493 aa27.81■■■□□ 2.04
CSNK1D-201ENST00000269361 VPS8Q8N3P4 1428 aa27.81■■■□□ 2.04
CSNK1D-201ENST00000269361 RTEL1-TNFRSF6BF6WH68 1400 aa27.8■■■□□ 2.04
CSNK1D-201ENST00000269361 SETD1BQ9UPS6 1966 aaKnown RBP27.8■■■□□ 2.04
CSNK1D-201ENST00000269361 SUPT6HQ7KZ85 1726 aaKnown RBP27.79■■■□□ 2.04
CSNK1D-201ENST00000269361 CERKQ8TCT0 537 aa27.79■■■□□ 2.04
CSNK1D-201ENST00000269361 NPATQ14207 1427 aa27.77■■■□□ 2.04
CSNK1D-201ENST00000269361 RSPH4AQ5TD94 716 aa27.77■■■□□ 2.04
CSNK1D-201ENST00000269361 PPP6R1Q9UPN7 881 aa27.77■■■□□ 2.04
CSNK1D-201ENST00000269361 DHX29Q7Z478 1369 aaKnown RBP27.74■■■□□ 2.03
CSNK1D-201ENST00000269361 CAMSAP2Q08AD1 1489 aa27.74■■■□□ 2.03
CSNK1D-201ENST00000269361 LRRC9Q6ZRR7 1453 aa27.73■■■□□ 2.03
CSNK1D-201ENST00000269361 MROH2AA6NES4 1674 aa27.72■■■□□ 2.03
CSNK1D-201ENST00000269361 CCDC141Q6ZP82 1450 aa27.72■■■□□ 2.03
CSNK1D-201ENST00000269361 STRCQ7RTU9 1775 aa27.71■■■□□ 2.03
CSNK1D-201ENST00000269361 ADGBQ8N7X0 1667 aa27.71■■■□□ 2.03
CSNK1D-201ENST00000269361 KANK4Q5T7N3 995 aaPredicted RBP27.69■■■□□ 2.02
CSNK1D-201ENST00000269361 PTPRTO14522 1441 aa27.67■■■□□ 2.02
CSNK1D-201ENST00000269361 PTPRKQ15262 1439 aa27.67■■■□□ 2.02
CSNK1D-201ENST00000269361 CLTCQ00610 1675 aaKnown RBP27.66■■■□□ 2.02
CSNK1D-201ENST00000269361 KIF3BO15066 747 aa27.66■■■□□ 2.02
CSNK1D-201ENST00000269361 TSPY4P0CV99 314 aa27.66■■■□□ 2.02
CSNK1D-201ENST00000269361 TSPY10P0CW01 314 aa27.66■■■□□ 2.02
CSNK1D-201ENST00000269361 MAP3K1Q13233 1512 aa27.65■■■□□ 2.02
CSNK1D-201ENST00000269361 NCOA1Q15788 1441 aa27.65■■■□□ 2.02
CSNK1D-201ENST00000269361 ARHGEF5Q12774 1597 aa27.61■■■□□ 2.01
CSNK1D-201ENST00000269361 CAMSAP1Q5T5Y3 1602 aa27.58■■■□□ 2.01
CSNK1D-201ENST00000269361 NCKAP5LQ9HCH0 1330 aa27.56■■■□□ 2
CSNK1D-201ENST00000269361 WASHC2CQ9Y4E1 1318 aa27.56■■■□□ 2
CSNK1D-201ENST00000269361 MYOM3Q5VTT5 1437 aa27.55■■■□□ 2
CSNK1D-201ENST00000269361 MIA2Q96PC5 1412 aa27.55■■■□□ 2
CSNK1D-201ENST00000269361 FBXO31Q5XUX0 539 aaPredicted RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms