RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 RAB3GAP2Q9H2M9 1393 aa24.05■■□□□ 1.44
PCTP-201ENST00000268896 SETD5Q9C0A6 1442 aa24.04■■□□□ 1.44
PCTP-201ENST00000268896 WDR7Q9Y4E6 1490 aa24.04■■□□□ 1.44
PCTP-201ENST00000268896 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
PCTP-201ENST00000268896 CDC42BPBQ9Y5S2 1711 aa24.02■■□□□ 1.44
PCTP-201ENST00000268896 PREX2Q70Z35 1606 aa24.01■■□□□ 1.43
PCTP-201ENST00000268896 DAPK1P53355 1430 aa24.01■■□□□ 1.43
PCTP-201ENST00000268896 RRP7BPQ9NSQ0 103 aa24.01■■□□□ 1.43
PCTP-201ENST00000268896 ARHGAP5Q13017 1502 aa23.99■■□□□ 1.43
PCTP-201ENST00000268896 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
PCTP-201ENST00000268896 ABCC5O15440 1437 aa23.99■■□□□ 1.43
PCTP-201ENST00000268896 MYO5CQ9NQX4 1742 aa23.99■■□□□ 1.43
PCTP-201ENST00000268896 ZEB1P37275 1124 aaPredicted RBP23.95■■□□□ 1.42
PCTP-201ENST00000268896 HNRNPMP52272 730 aaKnown RBP eCLIP23.95■■□□□ 1.42
PCTP-201ENST00000268896 SAMD9LQ8IVG5 1584 aa23.94■■□□□ 1.42
PCTP-201ENST00000268896 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
PCTP-201ENST00000268896 DHX57Q6P158 1386 aaKnown RBP23.93■■□□□ 1.42
PCTP-201ENST00000268896 NAIPQ13075 1403 aa23.93■■□□□ 1.42
PCTP-201ENST00000268896 PLCH2O75038 1416 aa23.91■■□□□ 1.42
PCTP-201ENST00000268896 CROCC2H7BZ55 1655 aa23.87■■□□□ 1.41
PCTP-201ENST00000268896 SYCP2Q9BX26 1530 aa23.87■■□□□ 1.41
PCTP-201ENST00000268896 AKNAQ7Z591 1439 aa23.86■■□□□ 1.41
PCTP-201ENST00000268896 ABCA9Q8IUA7 1624 aa23.86■■□□□ 1.41
PCTP-201ENST00000268896 EFCAB2Q5VUJ9 269 aa23.86■■□□□ 1.41
PCTP-201ENST00000268896 GCC2Q8IWJ2 1684 aa23.84■■□□□ 1.41
PCTP-201ENST00000268896 MBD5Q9P267 1494 aa23.84■■□□□ 1.41
PCTP-201ENST00000268896 KDM6BO15054 1643 aa23.83■■□□□ 1.41
PCTP-201ENST00000268896 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
PCTP-201ENST00000268896 TSPY4P0CV99 314 aa23.82■■□□□ 1.4
PCTP-201ENST00000268896 TSPY10P0CW01 314 aa23.82■■□□□ 1.4
PCTP-201ENST00000268896 ADGBQ8N7X0 1667 aa23.81■■□□□ 1.4
PCTP-201ENST00000268896 C9orf84Q5VXU9 1444 aa23.81■■□□□ 1.4
PCTP-201ENST00000268896 ARHGEF5Q12774 1597 aa23.8■■□□□ 1.4
PCTP-201ENST00000268896 CCDC141Q6ZP82 1450 aa23.8■■□□□ 1.4
PCTP-201ENST00000268896 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
PCTP-201ENST00000268896 NCOA1Q15788 1441 aa23.78■■□□□ 1.4
PCTP-201ENST00000268896 FANCAO15360 1455 aa23.77■■□□□ 1.4
PCTP-201ENST00000268896 MAPKBP1O60336 1514 aa23.77■■□□□ 1.4
PCTP-201ENST00000268896 ANKRD30AQ9BXX3 1397 aa23.77■■□□□ 1.4
PCTP-201ENST00000268896 PLEKHH2Q8IVE3 1493 aa23.77■■□□□ 1.4
PCTP-201ENST00000268896 SHANK2Q9UPX8 1470 aa23.76■■□□□ 1.39
PCTP-201ENST00000268896 ABCC1P33527 1531 aa23.76■■□□□ 1.39
PCTP-201ENST00000268896 TRIM52Q96A61 297 aa23.76■■□□□ 1.39
PCTP-201ENST00000268896 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
PCTP-201ENST00000268896 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
PCTP-201ENST00000268896 CD109Q6YHK3 1445 aa23.75■■□□□ 1.39
PCTP-201ENST00000268896 KIAA1107Q9UPP5 1409 aa23.75■■□□□ 1.39
PCTP-201ENST00000268896 RSPH4AQ5TD94 716 aa23.74■■□□□ 1.39
PCTP-201ENST00000268896 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
PCTP-201ENST00000268896 ADGRL1O94910 1474 aa23.68■■□□□ 1.38
PCTP-201ENST00000268896 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
PCTP-201ENST00000268896 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
PCTP-201ENST00000268896 CLSPNQ9HAW4 1339 aa23.68■■□□□ 1.38
PCTP-201ENST00000268896 FAM69CQ0P6D2 419 aa23.66■■□□□ 1.38
PCTP-201ENST00000268896 SCAPERQ9BY12 1400 aa23.66■■□□□ 1.38
PCTP-201ENST00000268896 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
PCTP-201ENST00000268896 MAST1Q9Y2H9 1570 aa23.63■■□□□ 1.37
PCTP-201ENST00000268896 MYT1LQ9UL68 1186 aa23.62■■□□□ 1.37
PCTP-201ENST00000268896 SIN3AQ96ST3 1273 aa23.61■■□□□ 1.37
PCTP-201ENST00000268896 SPAG9O60271 1321 aaKnown RBP23.61■■□□□ 1.37
PCTP-201ENST00000268896 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
PCTP-201ENST00000268896 MAP3K4Q9Y6R4 1608 aa23.59■■□□□ 1.37
PCTP-201ENST00000268896 NEUROD1Q13562 356 aa23.59■■□□□ 1.37
PCTP-201ENST00000268896 MPHOSPH9Q99550 1183 aa23.59■■□□□ 1.37
PCTP-201ENST00000268896 CFAP74Q9C0B2 1584 aa23.58■■□□□ 1.37
PCTP-201ENST00000268896 GLI2P10070 1586 aa23.58■■□□□ 1.37
PCTP-201ENST00000268896 FOXD1Q16676 465 aa23.56■■□□□ 1.36
PCTP-201ENST00000268896 PLXNC1O60486 1568 aa23.55■■□□□ 1.36
PCTP-201ENST00000268896 TSPOAP1O95153 1857 aa23.55■■□□□ 1.36
PCTP-201ENST00000268896 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
PCTP-201ENST00000268896 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
PCTP-201ENST00000268896 SLC4A1APQ9BWU0 796 aaKnown RBP23.54■■□□□ 1.36
PCTP-201ENST00000268896 NEO1Q92859 1461 aa23.51■■□□□ 1.35
PCTP-201ENST00000268896 ATP7AQ04656 1500 aa23.5■■□□□ 1.35
PCTP-201ENST00000268896 PZPP20742 1482 aa23.5■■□□□ 1.35
PCTP-201ENST00000268896 NUP155O75694 1391 aa23.5■■□□□ 1.35
PCTP-201ENST00000268896 RTEL1-TNFRSF6BF6WH68 1400 aa23.5■■□□□ 1.35
PCTP-201ENST00000268896 DUOX2Q9NRD8 1548 aa23.49■■□□□ 1.35
PCTP-201ENST00000268896 RAPGEF3O95398 923 aa23.49■■□□□ 1.35
PCTP-201ENST00000268896 ZNF518AQ6AHZ1 1483 aa23.49■■□□□ 1.35
PCTP-201ENST00000268896 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
PCTP-201ENST00000268896 POGZQ7Z3K3 1410 aa23.48■■□□□ 1.35
PCTP-201ENST00000268896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.354e-9■■■□□ 16.1
PCTP-201ENST00000268896 ACIN1Q9UKV3 1341 aaKnown RBP23.48■■□□□ 1.35
PCTP-201ENST00000268896 KIF13AQ9H1H9 1805 aa23.45■■□□□ 1.35
PCTP-201ENST00000268896 PPRC1Q5VV67 1664 aaKnown RBP23.43■■□□□ 1.34
PCTP-201ENST00000268896 ERBINQ96RT1 1412 aa23.43■■□□□ 1.34
PCTP-201ENST00000268896 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
PCTP-201ENST00000268896 PKD2Q13563 968 aa23.42■■□□□ 1.34
PCTP-201ENST00000268896 KDM5CP41229 1560 aa23.41■■□□□ 1.34
PCTP-201ENST00000268896 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
PCTP-201ENST00000268896 HECW2Q9P2P5 1572 aa23.38■■□□□ 1.33
PCTP-201ENST00000268896 UNC13BO14795 1591 aa23.37■■□□□ 1.33
PCTP-201ENST00000268896 TEX14Q8IWB6 1497 aa23.36■■□□□ 1.33
PCTP-201ENST00000268896 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
PCTP-201ENST00000268896 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
PCTP-201ENST00000268896 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
PCTP-201ENST00000268896 TONSLQ96HA7 1378 aa23.35■■□□□ 1.33
PCTP-201ENST00000268896 ANKRD30BQ9BXX2 1392 aa23.35■■□□□ 1.33
PCTP-201ENST00000268896 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms