RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.32
RTN1-201ENST00000267484 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
RTN1-201ENST00000267484 POLR3GLQ9BT43 218 aa23.27■■□□□ 1.32
RTN1-201ENST00000267484 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
RTN1-201ENST00000267484 NCOA1Q15788 1441 aa23.26■■□□□ 1.31
RTN1-201ENST00000267484 KIF7Q2M1P5 1343 aa23.24■■□□□ 1.31
RTN1-201ENST00000267484 ANKRD30BQ9BXX2 1392 aa23.23■■□□□ 1.31
RTN1-201ENST00000267484 KIF21AQ7Z4S6 1674 aa23.23■■□□□ 1.31
RTN1-201ENST00000267484 ZNF326Q5BKZ1 582 aaKnown RBP23.22■■□□□ 1.31
RTN1-201ENST00000267484 PPP4R2Q9NY27 417 aa23.21■■□□□ 1.31
RTN1-201ENST00000267484 IQGAP2Q13576 1575 aa23.21■■□□□ 1.31
RTN1-201ENST00000267484 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
RTN1-201ENST00000267484 AKNAQ7Z591 1439 aa23.21■■□□□ 1.31
RTN1-201ENST00000267484 MIA2Q96PC5 1412 aa23.21■■□□□ 1.31
RTN1-201ENST00000267484 DAPK1P53355 1430 aa23.19■■□□□ 1.3
RTN1-201ENST00000267484 BCL11AQ9H165 835 aa23.19■■□□□ 1.3
RTN1-201ENST00000267484 ABCC5O15440 1437 aa23.17■■□□□ 1.3
RTN1-201ENST00000267484 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
RTN1-201ENST00000267484 WDR62O43379 1518 aa23.17■■□□□ 1.3
RTN1-201ENST00000267484 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
RTN1-201ENST00000267484 ZBED9Q6R2W3 1325 aa23.15■■□□□ 1.3
RTN1-201ENST00000267484 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.3
RTN1-201ENST00000267484 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
RTN1-201ENST00000267484 ERICH6Q7L0X2 663 aa23.12■■□□□ 1.29
RTN1-201ENST00000267484 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
RTN1-201ENST00000267484 SPATA31E1Q6ZUB1 1445 aa23.11■■□□□ 1.29
RTN1-201ENST00000267484 ADAMTS12P58397 1594 aa23.08■■□□□ 1.29
RTN1-201ENST00000267484 ROCK1Q13464 1354 aa23.08■■□□□ 1.28
RTN1-201ENST00000267484 ERICH6BQ5W0A0 696 aa23.07■■□□□ 1.28
RTN1-201ENST00000267484 ZNF608Q9ULD9 1512 aaPredicted RBP23.04■■□□□ 1.28
RTN1-201ENST00000267484 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
RTN1-201ENST00000267484 PRG4Q92954 1404 aaPredicted RBP23.04■■□□□ 1.28
RTN1-201ENST00000267484 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
RTN1-201ENST00000267484 DNMT1P26358 1616 aaKnown RBP23.03■■□□□ 1.28
RTN1-201ENST00000267484 PKD2Q13563 968 aa23.02■■□□□ 1.28
RTN1-201ENST00000267484 PZPP20742 1482 aa23.01■■□□□ 1.27
RTN1-201ENST00000267484 DHX29Q7Z478 1369 aaKnown RBP23■■□□□ 1.27
RTN1-201ENST00000267484 USP47Q96K76 1375 aa23■■□□□ 1.27
RTN1-201ENST00000267484 DISP1Q96F81 1524 aa23■■□□□ 1.27
RTN1-201ENST00000267484 BCORL1Q5H9F3 1711 aa22.95■■□□□ 1.26
RTN1-201ENST00000267484 KIAA0556O60303 1618 aa22.95■■□□□ 1.26
RTN1-201ENST00000267484 CAMSAP2Q08AD1 1489 aa22.94■■□□□ 1.26
RTN1-201ENST00000267484 KDM2AQ9Y2K7 1162 aa22.94■■□□□ 1.26
RTN1-201ENST00000267484 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
RTN1-201ENST00000267484 RAPGEF6Q8TEU7 1601 aa22.91■■□□□ 1.26
RTN1-201ENST00000267484 KIAA0586Q9BVV6 1533 aa22.91■■□□□ 1.26
RTN1-201ENST00000267484 FBLN2P98095 1184 aa22.91■■□□□ 1.26
RTN1-201ENST00000267484 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
RTN1-201ENST00000267484 KIAA1107Q9UPP5 1409 aa22.91■■□□□ 1.26
RTN1-201ENST00000267484 SMG6Q86US8 1419 aaKnown RBP22.9■■□□□ 1.26
RTN1-201ENST00000267484 CCDC136Q96JN2 1154 aa22.89■■□□□ 1.25
RTN1-201ENST00000267484 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.25
RTN1-201ENST00000267484 TMC1Q8TDI8 760 aa22.89■■□□□ 1.25
RTN1-201ENST00000267484 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
RTN1-201ENST00000267484 POLR1AO95602 1720 aaPredicted RBP22.88■■□□□ 1.25
RTN1-201ENST00000267484 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
RTN1-201ENST00000267484 TROQ12816 1431 aaPredicted RBP22.88■■□□□ 1.25
RTN1-201ENST00000267484 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
RTN1-201ENST00000267484 SALL2Q9Y467 1007 aaPredicted RBP22.87■■□□□ 1.25
RTN1-201ENST00000267484 PNISRQ8TF01 805 aaKnown RBP22.86■■□□□ 1.25
RTN1-201ENST00000267484 PAK3O75914 559 aaPredicted RBP22.86■■□□□ 1.25
RTN1-201ENST00000267484 KIF14Q15058 1648 aa22.86■■□□□ 1.25
RTN1-201ENST00000267484 ST20-MTHFSA0A0A6YYL1 179 aa22.84■■□□□ 1.25
RTN1-201ENST00000267484 NUP155O75694 1391 aa22.84■■□□□ 1.25
RTN1-201ENST00000267484 NBR1Q14596 966 aa22.83■■□□□ 1.24
RTN1-201ENST00000267484 ANKRD50Q9ULJ7 1429 aa22.82■■□□□ 1.24
RTN1-201ENST00000267484 GRIN2AQ12879 1464 aa22.82■■□□□ 1.24
RTN1-201ENST00000267484 ANKRD30AQ9BXX3 1397 aa22.82■■□□□ 1.24
RTN1-201ENST00000267484 DCAF11Q8TEB1 546 aa22.8■■□□□ 1.24
RTN1-201ENST00000267484 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
RTN1-201ENST00000267484 KDM5CP41229 1560 aa22.8■■□□□ 1.24
RTN1-201ENST00000267484 NOP58Q9Y2X3 529 aaKnown RBP22.79■■□□□ 1.24
RTN1-201ENST00000267484 IFT140Q96RY7 1462 aa22.78■■□□□ 1.24
RTN1-201ENST00000267484 RNF123Q5XPI4 1314 aa22.78■■□□□ 1.24
RTN1-201ENST00000267484 ADGBQ8N7X0 1667 aa22.75■■□□□ 1.23
RTN1-201ENST00000267484 HNRNPMP52272 730 aaKnown RBP eCLIP22.75■■□□□ 1.23
RTN1-201ENST00000267484 ADGRL2O95490 1459 aa22.74■■□□□ 1.23
RTN1-201ENST00000267484 PLEKHD1A6NEE1 506 aa22.72■■□□□ 1.23
RTN1-201ENST00000267484 DEKP35659 375 aaKnown RBP22.72■■□□□ 1.23
RTN1-201ENST00000267484 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
RTN1-201ENST00000267484 KIF15Q9NS87 1388 aa22.71■■□□□ 1.23
RTN1-201ENST00000267484 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
RTN1-201ENST00000267484 RALGAPBQ86X10 1494 aa22.71■■□□□ 1.23
RTN1-201ENST00000267484 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
RTN1-201ENST00000267484 ARID4BQ4LE39 1312 aaPredicted RBP22.7■■□□□ 1.22
RTN1-201ENST00000267484 C9orf84Q5VXU9 1444 aa22.7■■□□□ 1.22
RTN1-201ENST00000267484 EIF4G3O43432 1585 aaKnown RBP22.7■■□□□ 1.22
RTN1-201ENST00000267484 TSPY4P0CV99 314 aa22.7■■□□□ 1.22
RTN1-201ENST00000267484 TSPY10P0CW01 314 aa22.7■■□□□ 1.22
RTN1-201ENST00000267484 EXOC6Q8TAG9 804 aa22.69■■□□□ 1.22
RTN1-201ENST00000267484 CROCC2H7BZ55 1655 aa22.68■■□□□ 1.22
RTN1-201ENST00000267484 UHRF1BP1Q6BDS2 1440 aa22.68■■□□□ 1.22
RTN1-201ENST00000267484 ROCK2O75116 1388 aaKnown RBP22.68■■□□□ 1.22
RTN1-201ENST00000267484 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
RTN1-201ENST00000267484 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
RTN1-201ENST00000267484 ANP32AP39687 249 aaKnown RBP22.65■■□□□ 1.22
RTN1-201ENST00000267484 NBPF1Q3BBV0 1214 aa22.65■■□□□ 1.22
RTN1-201ENST00000267484 NPM2Q86SE8 214 aaKnown RBP22.65■■□□□ 1.22
RTN1-201ENST00000267484 LRPPRCP42704 1394 aaKnown RBP22.65■■□□□ 1.22
RTN1-201ENST00000267484 RRP1P56182 461 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms