RNA–Protein interactions for RNA: ENST00000267163.4

RB1-201, Transcript of RB transcriptional corepressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RB1, Length 4,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-201ENST00000267163 PRG4Q92954 1404 aaPredicted RBP17.68■□□□□ 0.42
RB1-201ENST00000267163 NUDCQ9Y266 331 aa17.68■□□□□ 0.42
RB1-201ENST00000267163 NUTM2FA1L443 756 aa17.67■□□□□ 0.42
RB1-201ENST00000267163 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
RB1-201ENST00000267163 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
RB1-201ENST00000267163 HMGXB3Q12766 1538 aa17.65■□□□□ 0.42
RB1-201ENST00000267163 CC2D1BQ5T0F9 858 aaKnown RBP17.65■□□□□ 0.42
RB1-201ENST00000267163 MAPK8IP3Q9UPT6 1336 aa17.63■□□□□ 0.41
RB1-201ENST00000267163 BICRAQ9NZM4 1560 aa17.63■□□□□ 0.41
RB1-201ENST00000267163 CCDC9Q9Y3X0 531 aaKnown RBP17.63■□□□□ 0.41
RB1-201ENST00000267163 TOPBP1Q92547 1522 aa17.63■□□□□ 0.41
RB1-201ENST00000267163 LAS1LQ9Y4W2 734 aaKnown RBP17.63■□□□□ 0.41
RB1-201ENST00000267163 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
RB1-201ENST00000267163 NPHP1O15259 732 aa17.62■□□□□ 0.41
RB1-201ENST00000267163 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
RB1-201ENST00000267163 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
RB1-201ENST00000267163 NGDNQ8NEJ9 315 aaKnown RBP17.58■□□□□ 0.41
RB1-201ENST00000267163 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.41
RB1-201ENST00000267163 AFAP1Q8N556 730 aa17.58■□□□□ 0.4
RB1-201ENST00000267163 RAB3GAP2Q9H2M9 1393 aa17.57■□□□□ 0.4
RB1-201ENST00000267163 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
RB1-201ENST00000267163 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
RB1-201ENST00000267163 MORC1Q86VD1 984 aa17.56■□□□□ 0.4
RB1-201ENST00000267163 TRAK1Q9UPV9 953 aa17.54■□□□□ 0.4
RB1-201ENST00000267163 MIER1Q8N108 512 aa17.52■□□□□ 0.39
RB1-201ENST00000267163 ROCK2O75116 1388 aaKnown RBP17.51■□□□□ 0.39
RB1-201ENST00000267163 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
RB1-201ENST00000267163 FKBP8Q14318 412 aa17.5■□□□□ 0.39
RB1-201ENST00000267163 VGFO15240 615 aaPredicted RBP17.49■□□□□ 0.39
RB1-201ENST00000267163 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
RB1-201ENST00000267163 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
RB1-201ENST00000267163 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
RB1-201ENST00000267163 HSPA5P11021 654 aaKnown RBP17.47■□□□□ 0.39
RB1-201ENST00000267163 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
RB1-201ENST00000267163 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
RB1-201ENST00000267163 RAPGEF3O95398 923 aa17.46■□□□□ 0.39
RB1-201ENST00000267163 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
RB1-201ENST00000267163 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
RB1-201ENST00000267163 TERF2IPQ9NYB0 399 aa17.43■□□□□ 0.38
RB1-201ENST00000267163 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
RB1-201ENST00000267163 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
RB1-201ENST00000267163 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
RB1-201ENST00000267163 CUX1P39880 1505 aa17.42■□□□□ 0.38
RB1-201ENST00000267163 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
RB1-201ENST00000267163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
RB1-201ENST00000267163 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
RB1-201ENST00000267163 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
RB1-201ENST00000267163 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
RB1-201ENST00000267163 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
RB1-201ENST00000267163 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
RB1-201ENST00000267163 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
RB1-201ENST00000267163 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
RB1-201ENST00000267163 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
RB1-201ENST00000267163 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
RB1-201ENST00000267163 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
RB1-201ENST00000267163 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
RB1-201ENST00000267163 AMPHP49418 695 aa17.37■□□□□ 0.37
RB1-201ENST00000267163 U2AF1L5P0DN76 240 aaPredicted RBP17.36■□□□□ 0.37
RB1-201ENST00000267163 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
RB1-201ENST00000267163 FTSJ3Q8IY81 847 aaKnown RBP17.36■□□□□ 0.37
RB1-201ENST00000267163 ARHGAP5Q13017 1502 aa17.35■□□□□ 0.37
RB1-201ENST00000267163 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
RB1-201ENST00000267163 FRAT1Q92837 279 aaPredicted RBP17.34■□□□□ 0.37
RB1-201ENST00000267163 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.36
RB1-201ENST00000267163 ATF3P18847 181 aa17.32■□□□□ 0.36
RB1-201ENST00000267163 TXNDC2Q86VQ3 553 aa17.32■□□□□ 0.36
RB1-201ENST00000267163 UACAQ9BZF9 1416 aa17.31■□□□□ 0.36
RB1-201ENST00000267163 EVA1CP58658 441 aa17.3■□□□□ 0.36
RB1-201ENST00000267163 MEX3CQ5U5Q3 659 aaKnown RBP17.3■□□□□ 0.36
RB1-201ENST00000267163 KIAA0586Q9BVV6 1533 aa17.29■□□□□ 0.36
RB1-201ENST00000267163 PSME1Q06323 249 aa17.29■□□□□ 0.36
RB1-201ENST00000267163 CASKIN1Q8WXD9 1431 aa17.29■□□□□ 0.36
RB1-201ENST00000267163 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
RB1-201ENST00000267163 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
RB1-201ENST00000267163 ANP32AP39687 249 aaKnown RBP17.27■□□□□ 0.36
RB1-201ENST00000267163 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.35
RB1-201ENST00000267163 FGD6Q6ZV73 1430 aa17.27■□□□□ 0.35
RB1-201ENST00000267163 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
RB1-201ENST00000267163 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
RB1-201ENST00000267163 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
RB1-201ENST00000267163 ANKRD50Q9ULJ7 1429 aa17.25■□□□□ 0.35
RB1-201ENST00000267163 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
RB1-201ENST00000267163 PHLDB1Q86UU1 1377 aa17.25■□□□□ 0.35
RB1-201ENST00000267163 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
RB1-201ENST00000267163 ABCA10Q8WWZ4 1543 aa17.24■□□□□ 0.35
RB1-201ENST00000267163 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
RB1-201ENST00000267163 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
RB1-201ENST00000267163 NCOA2Q15596 1464 aa17.23■□□□□ 0.35
RB1-201ENST00000267163 GOLGA2Q08379 1002 aa17.22■□□□□ 0.35
RB1-201ENST00000267163 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
RB1-201ENST00000267163 COG3Q96JB2 828 aa17.21■□□□□ 0.35
RB1-201ENST00000267163 PRXQ9BXM0 1461 aa17.21■□□□□ 0.35
RB1-201ENST00000267163 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.34
RB1-201ENST00000267163 CD109Q6YHK3 1445 aa17.2■□□□□ 0.34
RB1-201ENST00000267163 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
RB1-201ENST00000267163 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
RB1-201ENST00000267163 KIF21BO75037 1637 aa17.19■□□□□ 0.34
RB1-201ENST00000267163 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
RB1-201ENST00000267163 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
RB1-201ENST00000267163 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms