RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
SFSWAP-201ENST00000261674 CCDC18Q5T9S5 1454 aa20.14■□□□□ 0.82
SFSWAP-201ENST00000261674 ATP10BO94823 1461 aa20.14■□□□□ 0.81
SFSWAP-201ENST00000261674 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
SFSWAP-201ENST00000261674 RBM19Q9Y4C8 960 aaKnown RBP20.13■□□□□ 0.81
SFSWAP-201ENST00000261674 UACAQ9BZF9 1416 aa20.13■□□□□ 0.81
SFSWAP-201ENST00000261674 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
SFSWAP-201ENST00000261674 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
SFSWAP-201ENST00000261674 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
SFSWAP-201ENST00000261674 HSPA5P11021 654 aaKnown RBP20.1■□□□□ 0.81
SFSWAP-201ENST00000261674 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
SFSWAP-201ENST00000261674 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
SFSWAP-201ENST00000261674 POLR3GLQ9BT43 218 aa20.08■□□□□ 0.81
SFSWAP-201ENST00000261674 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.8
SFSWAP-201ENST00000261674 CLASP1Q7Z460 1538 aa20.06■□□□□ 0.8
SFSWAP-201ENST00000261674 EIF4G2P78344 907 aaKnown RBP eCLIP20.03■□□□□ 0.81e-6■■■□□ 17.3
SFSWAP-201ENST00000261674 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
SFSWAP-201ENST00000261674 CFAP43Q8NDM7 1665 aa20.02■□□□□ 0.8
SFSWAP-201ENST00000261674 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
SFSWAP-201ENST00000261674 NAIPQ13075 1403 aa20.02■□□□□ 0.8
SFSWAP-201ENST00000261674 CCDC184Q52MB2 194 aa20.01■□□□□ 0.79
SFSWAP-201ENST00000261674 HFM1A2PYH4 1435 aa20.01■□□□□ 0.79
SFSWAP-201ENST00000261674 MYOM3Q5VTT5 1437 aa20.01■□□□□ 0.79
SFSWAP-201ENST00000261674 WASHC2AQ641Q2 1341 aa20.01■□□□□ 0.79
SFSWAP-201ENST00000261674 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
SFSWAP-201ENST00000261674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
SFSWAP-201ENST00000261674 TROQ12816 1431 aaPredicted RBP20■□□□□ 0.79
SFSWAP-201ENST00000261674 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-201ENST00000261674 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
SFSWAP-201ENST00000261674 KIF14Q15058 1648 aa19.97■□□□□ 0.79
SFSWAP-201ENST00000261674 ABCA8O94911 1581 aa19.97■□□□□ 0.79
SFSWAP-201ENST00000261674 EHBP1L1Q8N3D4 1523 aa19.96■□□□□ 0.79
SFSWAP-201ENST00000261674 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
SFSWAP-201ENST00000261674 C11orf95C9JLR9 678 aaPredicted RBP19.93■□□□□ 0.78
SFSWAP-201ENST00000261674 SHROOM2Q13796 1616 aa19.93■□□□□ 0.78
SFSWAP-201ENST00000261674 SUPT6HQ7KZ85 1726 aaKnown RBP19.92■□□□□ 0.78
SFSWAP-201ENST00000261674 PTPN23Q9H3S7 1636 aa19.91■□□□□ 0.78
SFSWAP-201ENST00000261674 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
SFSWAP-201ENST00000261674 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
SFSWAP-201ENST00000261674 AFAP1Q8N556 730 aa19.89■□□□□ 0.77
SFSWAP-201ENST00000261674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.778e-7■■■□□ 16.7
SFSWAP-201ENST00000261674 ABCC2Q92887 1545 aa19.89■□□□□ 0.77
SFSWAP-201ENST00000261674 GPATCH8Q9UKJ3 1502 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-201ENST00000261674 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
SFSWAP-201ENST00000261674 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
SFSWAP-201ENST00000261674 B4GALNT3Q6L9W6 998 aa19.87■□□□□ 0.77
SFSWAP-201ENST00000261674 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
SFSWAP-201ENST00000261674 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
SFSWAP-201ENST00000261674 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
SFSWAP-201ENST00000261674 ASXL2Q76L83 1435 aa19.83■□□□□ 0.77
SFSWAP-201ENST00000261674 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
SFSWAP-201ENST00000261674 MSH5O43196 834 aa19.81■□□□□ 0.76
SFSWAP-201ENST00000261674 EFCAB2Q5VUJ9 269 aa19.79■□□□□ 0.76
SFSWAP-201ENST00000261674 ARHGAP5Q13017 1502 aa19.79■□□□□ 0.76
SFSWAP-201ENST00000261674 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
SFSWAP-201ENST00000261674 ZCCHC11Q5TAX3 1644 aaKnown RBP19.78■□□□□ 0.76
SFSWAP-201ENST00000261674 RAPGEF3O95398 923 aa19.77■□□□□ 0.75
SFSWAP-201ENST00000261674 ABCC5O15440 1437 aa19.77■□□□□ 0.75
SFSWAP-201ENST00000261674 CAMSAP2Q08AD1 1489 aa19.77■□□□□ 0.75
SFSWAP-201ENST00000261674 PPP4R2Q9NY27 417 aa19.76■□□□□ 0.75
SFSWAP-201ENST00000261674 CCDC7Q96M83 1385 aa19.76■□□□□ 0.75
SFSWAP-201ENST00000261674 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
SFSWAP-201ENST00000261674 DAPK1P53355 1430 aa19.73■□□□□ 0.75
SFSWAP-201ENST00000261674 TTC37Q6PGP7 1564 aa19.73■□□□□ 0.75
SFSWAP-201ENST00000261674 KIF7Q2M1P5 1343 aa19.73■□□□□ 0.75
SFSWAP-201ENST00000261674 CNTLNQ9NXG0 1405 aa19.73■□□□□ 0.75
SFSWAP-201ENST00000261674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.73■□□□□ 0.754e-7■■□□□ 13.8
SFSWAP-201ENST00000261674 ABCC10Q5T3U5 1492 aa19.73■□□□□ 0.75
SFSWAP-201ENST00000261674 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
SFSWAP-201ENST00000261674 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
SFSWAP-201ENST00000261674 KDM6BO15054 1643 aa19.72■□□□□ 0.75
SFSWAP-201ENST00000261674 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
SFSWAP-201ENST00000261674 MIA2Q96PC5 1412 aa19.71■□□□□ 0.75
SFSWAP-201ENST00000261674 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
SFSWAP-201ENST00000261674 DENND4BO75064 1496 aaPredicted RBP19.7■□□□□ 0.74
SFSWAP-201ENST00000261674 WDR7Q9Y4E6 1490 aa19.7■□□□□ 0.74
SFSWAP-201ENST00000261674 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
SFSWAP-201ENST00000261674 BCL11AQ9H165 835 aa19.66■□□□□ 0.74
SFSWAP-201ENST00000261674 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
SFSWAP-201ENST00000261674 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
SFSWAP-201ENST00000261674 ANKRD30BQ9BXX2 1392 aa19.65■□□□□ 0.74
SFSWAP-201ENST00000261674 PKD2Q13563 968 aa19.65■□□□□ 0.74
SFSWAP-201ENST00000261674 CD109Q6YHK3 1445 aa19.64■□□□□ 0.74
SFSWAP-201ENST00000261674 TRAPPC8Q9Y2L5 1435 aa19.64■□□□□ 0.73
SFSWAP-201ENST00000261674 SPAG9O60271 1321 aaKnown RBP19.64■□□□□ 0.73
SFSWAP-201ENST00000261674 ZBED9Q6R2W3 1325 aa19.63■□□□□ 0.73
SFSWAP-201ENST00000261674 SYCP2Q9BX26 1530 aa19.63■□□□□ 0.73
SFSWAP-201ENST00000261674 NCOA1Q15788 1441 aa19.63■□□□□ 0.73
SFSWAP-201ENST00000261674 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
SFSWAP-201ENST00000261674 C9orf84Q5VXU9 1444 aa19.62■□□□□ 0.73
SFSWAP-201ENST00000261674 TMC1Q8TDI8 760 aa19.62■□□□□ 0.73
SFSWAP-201ENST00000261674 PLCH2O75038 1416 aa19.61■□□□□ 0.73
SFSWAP-201ENST00000261674 CDC42BPAQ5VT25 1732 aa19.61■□□□□ 0.73
SFSWAP-201ENST00000261674 SCAPERQ9BY12 1400 aa19.61■□□□□ 0.73
SFSWAP-201ENST00000261674 TCOF1Q13428 1488 aaKnown RBP19.61■□□□□ 0.73
SFSWAP-201ENST00000261674 ANKRD30AQ9BXX3 1397 aa19.61■□□□□ 0.73
SFSWAP-201ENST00000261674 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
SFSWAP-201ENST00000261674 ARHGEF12Q9NZN5 1544 aa19.6■□□□□ 0.73
SFSWAP-201ENST00000261674 FANCAO15360 1455 aa19.6■□□□□ 0.73
SFSWAP-201ENST00000261674 CCDC136Q96JN2 1154 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms