RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 CHAF1AQ13111 956 aaPredicted RBP5.2□□□□□ -1.58
RNF38-201ENST00000259605 WASHC2CQ9Y4E1 1318 aa5.2□□□□□ -1.58
RNF38-201ENST00000259605 KIF27Q86VH2 1401 aa5.19□□□□□ -1.58
RNF38-201ENST00000259605 NEUROD2Q15784 382 aa5.19□□□□□ -1.58
RNF38-201ENST00000259605 CCDC34Q96HJ3 373 aa5.19□□□□□ -1.58
RNF38-201ENST00000259605 SMC4Q9NTJ3 1288 aa5.19□□□□□ -1.58
RNF38-201ENST00000259605 SPAG9O60271 1321 aaKnown RBP5.19□□□□□ -1.58
RNF38-201ENST00000259605 SOX12O15370 315 aa5.19□□□□□ -1.58
RNF38-201ENST00000259605 CFAP44Q96MT7 982 aa5.18□□□□□ -1.58
RNF38-201ENST00000259605 PSME1Q06323 249 aa5.18□□□□□ -1.58
RNF38-201ENST00000259605 NRDCO43847 1150 aa5.18□□□□□ -1.58
RNF38-201ENST00000259605 PAXIP1Q6ZW49 1069 aaPredicted RBP5.18□□□□□ -1.58
RNF38-201ENST00000259605 RBM33Q96EV2 1170 aaKnown RBP5.18□□□□□ -1.58
RNF38-201ENST00000259605 WWC2Q6AWC2 1192 aa5.17□□□□□ -1.58
RNF38-201ENST00000259605 AMPHP49418 695 aa5.17□□□□□ -1.58
RNF38-201ENST00000259605 NUTM2BA6NNL0 878 aaPredicted RBP5.17□□□□□ -1.58
RNF38-201ENST00000259605 NUTM2EB1AL46 878 aaPredicted RBP5.17□□□□□ -1.58
RNF38-201ENST00000259605 NUTM2DQ5VT03 806 aaPredicted RBP5.17□□□□□ -1.58
RNF38-201ENST00000259605 NUTM2AQ8IVF1 878 aaPredicted RBP5.17□□□□□ -1.58
RNF38-201ENST00000259605 BEGAINQ9BUH8 593 aa5.17□□□□□ -1.58
RNF38-201ENST00000259605 TERF2IPQ9NYB0 399 aa5.17□□□□□ -1.58
RNF38-201ENST00000259605 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.17□□□□□ -1.58
RNF38-201ENST00000259605 CEP162Q5TB80 1403 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 KIAA2012Q0VF49 1180 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 LAS1LQ9Y4W2 734 aaKnown RBP5.16□□□□□ -1.58
RNF38-201ENST00000259605 CCDC180Q9P1Z9 1646 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 GOLGA6L6A8MZA4 724 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 MARCH6O60337 910 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 TRIM44Q96DX7 344 aaPredicted RBP5.16□□□□□ -1.58
RNF38-201ENST00000259605 PIP4K2BP78356 416 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 C1orf141Q5JVX7 400 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 FTSJ3Q8IY81 847 aaKnown RBP5.16□□□□□ -1.58
RNF38-201ENST00000259605 U2SURPO15042 1029 aaKnown RBP5.16□□□□□ -1.58
RNF38-201ENST00000259605 PDE3BQ13370 1112 aa5.16□□□□□ -1.58
RNF38-201ENST00000259605 WRNQ14191 1432 aaPredicted RBP eCLIP5.15□□□□□ -1.58
RNF38-201ENST00000259605 GNL2Q13823 731 aaKnown RBP5.15□□□□□ -1.58
RNF38-201ENST00000259605 TTC5Q8N0Z6 440 aa5.15□□□□□ -1.58
RNF38-201ENST00000259605 NAP1L2Q9ULW6 460 aaPredicted RBP5.15□□□□□ -1.58
RNF38-201ENST00000259605 R3HCC1Q9Y3T6 440 aaKnown RBP5.15□□□□□ -1.58
RNF38-201ENST00000259605 SYTL4Q96C24 671 aaPredicted RBP5.15□□□□□ -1.58
RNF38-201ENST00000259605 TOM1O60784 492 aa5.15□□□□□ -1.59
RNF38-201ENST00000259605 LRRFIP1Q32MZ4 808 aaKnown RBP5.15□□□□□ -1.59
RNF38-201ENST00000259605 VPS53Q5VIR6 699 aa5.15□□□□□ -1.59
RNF38-201ENST00000259605 CEP89Q96ST8 783 aa5.15□□□□□ -1.59
RNF38-201ENST00000259605 STK26Q9P289 416 aa5.15□□□□□ -1.59
RNF38-201ENST00000259605 KIF3BO15066 747 aa5.15□□□□□ -1.59
RNF38-201ENST00000259605 PROSER2Q86WR7 435 aaPredicted RBP5.15□□□□□ -1.59
RNF38-201ENST00000259605 STK31Q9BXU1 1019 aa5.15□□□□□ -1.59
RNF38-201ENST00000259605 GOLGA6L22H0YM25 854 aa5.14□□□□□ -1.59
RNF38-201ENST00000259605 NBPF8Q3BBV2 869 aa5.14□□□□□ -1.59
RNF38-201ENST00000259605 NBPF14Q5TI25 921 aa5.14□□□□□ -1.59
RNF38-201ENST00000259605 ANP32AP39687 249 aaKnown RBP5.14□□□□□ -1.59
RNF38-201ENST00000259605 THEMISQ8N1K5 641 aaPredicted RBP5.14□□□□□ -1.59
RNF38-201ENST00000259605 GPATCH3Q96I76 525 aa5.14□□□□□ -1.59
RNF38-201ENST00000259605 TMF1P82094 1093 aa5.14□□□□□ -1.59
RNF38-201ENST00000259605 CHMP3Q9Y3E7 222 aa5.14□□□□□ -1.59
RNF38-201ENST00000259605 CHMP4CQ96CF2 233 aa5.13□□□□□ -1.59
RNF38-201ENST00000259605 RRP7BPQ9NSQ0 103 aa5.13□□□□□ -1.59
RNF38-201ENST00000259605 LMOD3Q0VAK6 560 aa5.13□□□□□ -1.59
RNF38-201ENST00000259605 PPP4R2Q9NY27 417 aa5.13□□□□□ -1.59
RNF38-201ENST00000259605 TMEM87AQ8NBN3 555 aa5.13□□□□□ -1.59
RNF38-201ENST00000259605 FBXW7Q969H0 707 aa5.13□□□□□ -1.59
RNF38-201ENST00000259605 EIF4G1Q04637 1599 aaKnown RBP5.12□□□□□ -1.59
RNF38-201ENST00000259605 MCCP23508 829 aa5.12□□□□□ -1.59
RNF38-201ENST00000259605 VPS37DQ86XT2 251 aa5.12□□□□□ -1.59
RNF38-201ENST00000259605 CCDC43Q96MW1 224 aaKnown RBP5.12□□□□□ -1.59
RNF38-201ENST00000259605 CARD11Q9BXL7 1154 aa5.12□□□□□ -1.59
RNF38-201ENST00000259605 EIF3AQ14152 1382 aaKnown RBP5.12□□□□□ -1.59
RNF38-201ENST00000259605 RAPGEF4Q8WZA2 1011 aa5.12□□□□□ -1.59
RNF38-201ENST00000259605 EEA1Q15075 1411 aa5.12□□□□□ -1.59
RNF38-201ENST00000259605 VGFO15240 615 aaPredicted RBP5.12□□□□□ -1.59
RNF38-201ENST00000259605 MORC1Q86VD1 984 aa5.11□□□□□ -1.59
RNF38-201ENST00000259605 GPRASP1Q5JY77 1395 aa5.11□□□□□ -1.59
RNF38-201ENST00000259605 FHAD1B1AJZ9 1412 aa5.11□□□□□ -1.59
RNF38-201ENST00000259605 ANKLE2Q86XL3 938 aa5.11□□□□□ -1.59
RNF38-201ENST00000259605 HNRNPMP52272 730 aaKnown RBP eCLIP5.11□□□□□ -1.59
RNF38-201ENST00000259605 SAFB2Q14151 953 aaKnown RBP eCLIP5.11□□□□□ -1.59
RNF38-201ENST00000259605 RTN4Q9NQC3 1192 aaKnown RBP5.11□□□□□ -1.59
RNF38-201ENST00000259605 NGLY1Q96IV0 654 aa5.1□□□□□ -1.59
RNF38-201ENST00000259605 HTATSF1O43719 755 aaKnown RBP5.1□□□□□ -1.59
RNF38-201ENST00000259605 TEFQ10587 303 aa5.1□□□□□ -1.59
RNF38-201ENST00000259605 KIAA1211Q6ZU35 1233 aa5.1□□□□□ -1.59
RNF38-201ENST00000259605 JPH4Q96JJ6 628 aa5.1□□□□□ -1.59
RNF38-201ENST00000259605 GOLGA6L4A6NEF3 574 aa5.1□□□□□ -1.59
RNF38-201ENST00000259605 POLD1P28340 1107 aa5.1□□□□□ -1.59
RNF38-201ENST00000259605 NEXNQ0ZGT2 675 aa5.1□□□□□ -1.59
RNF38-201ENST00000259605 IL27Q8NEV9 243 aa5.09□□□□□ -1.59
RNF38-201ENST00000259605 UACAQ9BZF9 1416 aa5.09□□□□□ -1.59
RNF38-201ENST00000259605 CEP164Q9UPV0 1460 aa5.09□□□□□ -1.59
RNF38-201ENST00000259605 PAF1Q8N7H5 531 aa5.09□□□□□ -1.59
RNF38-201ENST00000259605 PTPRGP23470 1445 aa5.09□□□□□ -1.59
RNF38-201ENST00000259605 IPO8O15397 1037 aaKnown RBP5.09□□□□□ -1.59
RNF38-201ENST00000259605 RASSF8Q8NHQ8 419 aa5.09□□□□□ -1.59
RNF38-201ENST00000259605 LOC105371045A0A1W2PR82 267 aa5.09□□□□□ -1.6
RNF38-201ENST00000259605 TAOK2Q9UL54 1235 aa5.09□□□□□ -1.6
RNF38-201ENST00000259605 ABCC8Q09428 1581 aa5.09□□□□□ -1.6
RNF38-201ENST00000259605 UBAP1LF5GYI3 381 aa5.08□□□□□ -1.6
RNF38-201ENST00000259605 SALL2Q9Y467 1007 aaPredicted RBP5.08□□□□□ -1.6
RNF38-201ENST00000259605 SPDYE4A6NLX3 237 aa5.08□□□□□ -1.6
RNF38-201ENST00000259605 TMOD2Q9NZR1 351 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms