RNA–Protein interactions for RNA: ENST00000253452.6

COX4I1-201, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX4I1, Length 708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-201ENST00000253452 HECW1Q76N89 1606 aa23.57■■□□□ 1.36
COX4I1-201ENST00000253452 PCF11O94913 1555 aaKnown RBP23.57■■□□□ 1.36
COX4I1-201ENST00000253452 FBXO41Q8TF61 875 aa23.56■■□□□ 1.36
COX4I1-201ENST00000253452 LMTK3Q96Q04 1460 aa23.55■■□□□ 1.36
COX4I1-201ENST00000253452 MLECQ14165 292 aa23.52■■□□□ 1.36
COX4I1-201ENST00000253452 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
COX4I1-201ENST00000253452 ATP10AO60312 1499 aa23.51■■□□□ 1.35
COX4I1-201ENST00000253452 RIMS1Q86UR5 1692 aaKnown RBP23.51■■□□□ 1.35
COX4I1-201ENST00000253452 CLIP1P30622 1438 aa23.5■■□□□ 1.35
COX4I1-201ENST00000253452 PLPPR3Q6T4P5 718 aa23.49■■□□□ 1.35
COX4I1-201ENST00000253452 C9orf84Q5VXU9 1444 aa23.46■■□□□ 1.35
COX4I1-201ENST00000253452 KIF14Q15058 1648 aa23.45■■□□□ 1.34
COX4I1-201ENST00000253452 ZNF518AQ6AHZ1 1483 aa23.45■■□□□ 1.34
COX4I1-201ENST00000253452 HSPA2P54652 639 aa23.45■■□□□ 1.34
COX4I1-201ENST00000253452 AFAP1Q8N556 730 aa23.44■■□□□ 1.34
COX4I1-201ENST00000253452 MYO5CQ9NQX4 1742 aa23.44■■□□□ 1.34
COX4I1-201ENST00000253452 ARHGAP5Q13017 1502 aa23.43■■□□□ 1.34
COX4I1-201ENST00000253452 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
COX4I1-201ENST00000253452 MYT1LQ9UL68 1186 aa23.41■■□□□ 1.34
COX4I1-201ENST00000253452 ARHGEF12Q9NZN5 1544 aa23.4■■□□□ 1.34
COX4I1-201ENST00000253452 CASKIN1Q8WXD9 1431 aa23.39■■□□□ 1.33
COX4I1-201ENST00000253452 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
COX4I1-201ENST00000253452 KDM5CP41229 1560 aa23.36■■□□□ 1.33
COX4I1-201ENST00000253452 FER1L4A9Z1Z3 1794 aa23.34■■□□□ 1.33
COX4I1-201ENST00000253452 MLH3Q9UHC1 1453 aa23.33■■□□□ 1.33
COX4I1-201ENST00000253452 CEBPAP49715 358 aaPredicted RBP23.33■■□□□ 1.33
COX4I1-201ENST00000253452 LRRIQ1Q96JM4 1722 aa23.28■■□□□ 1.32
COX4I1-201ENST00000253452 REREQ9P2R6 1566 aa23.28■■□□□ 1.32
COX4I1-201ENST00000253452 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
COX4I1-201ENST00000253452 CERKQ8TCT0 537 aa23.27■■□□□ 1.32
COX4I1-201ENST00000253452 ESF1Q9H501 851 aaKnown RBP23.27■■□□□ 1.32
COX4I1-201ENST00000253452 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
COX4I1-201ENST00000253452 CDC42BPBQ9Y5S2 1711 aa23.26■■□□□ 1.31
COX4I1-201ENST00000253452 DMRT2Q9Y5R5 561 aa23.26■■□□□ 1.31
COX4I1-201ENST00000253452 FYCO1Q9BQS8 1478 aa23.25■■□□□ 1.31
COX4I1-201ENST00000253452 ABCC1P33527 1531 aa23.25■■□□□ 1.31
COX4I1-201ENST00000253452 PREX2Q70Z35 1606 aa23.25■■□□□ 1.31
COX4I1-201ENST00000253452 AGLP35573 1532 aa23.24■■□□□ 1.31
COX4I1-201ENST00000253452 UHRF1BP1Q6BDS2 1440 aa23.23■■□□□ 1.31
COX4I1-201ENST00000253452 ZNF777Q9ULD5 760 aaPredicted RBP23.21■■□□□ 1.31
COX4I1-201ENST00000253452 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
COX4I1-201ENST00000253452 ABCA6Q8N139 1617 aa23.19■■□□□ 1.3
COX4I1-201ENST00000253452 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
COX4I1-201ENST00000253452 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
COX4I1-201ENST00000253452 ITSN2Q9NZM3 1697 aa23.16■■□□□ 1.3
COX4I1-201ENST00000253452 SPAG9O60271 1321 aaKnown RBP23.15■■□□□ 1.3
COX4I1-201ENST00000253452 HNRNPMP52272 730 aaKnown RBP eCLIP23.15■■□□□ 1.31e-6■■■■□ 22.9
COX4I1-201ENST00000253452 CFDP1Q9UEE9 299 aaPredicted RBP23.15■■□□□ 1.3
COX4I1-201ENST00000253452 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
COX4I1-201ENST00000253452 CDC42BPAQ5VT25 1732 aa23.13■■□□□ 1.29
COX4I1-201ENST00000253452 KIDINS220Q9ULH0 1771 aa23.12■■□□□ 1.29
COX4I1-201ENST00000253452 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
COX4I1-201ENST00000253452 PLEKHH2Q8IVE3 1493 aa23.11■■□□□ 1.29
COX4I1-201ENST00000253452 SETD1BQ9UPS6 1966 aaKnown RBP23.11■■□□□ 1.29
COX4I1-201ENST00000253452 CCNB3Q8WWL7 1395 aa23.11■■□□□ 1.29
COX4I1-201ENST00000253452 MTUS2Q5JR59 1369 aa23.09■■□□□ 1.29
COX4I1-201ENST00000253452 PTPRTO14522 1441 aa23.08■■□□□ 1.29
COX4I1-201ENST00000253452 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
COX4I1-201ENST00000253452 C3P01024 1663 aa23.08■■□□□ 1.29
COX4I1-201ENST00000253452 ZMYM3Q14202 1370 aa23.06■■□□□ 1.28
COX4I1-201ENST00000253452 STRCQ7RTU9 1775 aa23.05■■□□□ 1.28
COX4I1-201ENST00000253452 NPATQ14207 1427 aa23.05■■□□□ 1.28
COX4I1-201ENST00000253452 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
COX4I1-201ENST00000253452 A2MP01023 1474 aa23.02■■□□□ 1.28
COX4I1-201ENST00000253452 ATP7AQ04656 1500 aa23.02■■□□□ 1.28
COX4I1-201ENST00000253452 GGT6Q6P531 493 aa22.99■■□□□ 1.27
COX4I1-201ENST00000253452 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
COX4I1-201ENST00000253452 MROH2AA6NES4 1674 aa22.97■■□□□ 1.27
COX4I1-201ENST00000253452 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
COX4I1-201ENST00000253452 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
COX4I1-201ENST00000253452 PLXNC1O60486 1568 aa22.95■■□□□ 1.26
COX4I1-201ENST00000253452 RTEL1-TNFRSF6BF6WH68 1400 aa22.94■■□□□ 1.26
COX4I1-201ENST00000253452 SUPT6HQ7KZ85 1726 aaKnown RBP22.94■■□□□ 1.26
COX4I1-201ENST00000253452 EHBP1L1Q8N3D4 1523 aa22.93■■□□□ 1.26
COX4I1-201ENST00000253452 MBD5Q9P267 1494 aa22.93■■□□□ 1.26
COX4I1-201ENST00000253452 CEP162Q5TB80 1403 aa22.93■■□□□ 1.26
COX4I1-201ENST00000253452 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
COX4I1-201ENST00000253452 PTPRKQ15262 1439 aa22.91■■□□□ 1.26
COX4I1-201ENST00000253452 CAMSAP1Q5T5Y3 1602 aa22.9■■□□□ 1.26
COX4I1-201ENST00000253452 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
COX4I1-201ENST00000253452 PKD2Q13563 968 aa22.9■■□□□ 1.26
COX4I1-201ENST00000253452 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.25
COX4I1-201ENST00000253452 NCKAP5LQ9HCH0 1330 aa22.88■■□□□ 1.25
COX4I1-201ENST00000253452 IQSEC2Q5JU85 1478 aa22.88■■□□□ 1.25
COX4I1-201ENST00000253452 LTBP4Q8N2S1 1624 aa22.88■■□□□ 1.25
COX4I1-201ENST00000253452 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
COX4I1-201ENST00000253452 PLA2R1Q13018 1463 aa22.85■■□□□ 1.25
COX4I1-201ENST00000253452 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
COX4I1-201ENST00000253452 KIF3BO15066 747 aa22.83■■□□□ 1.25
COX4I1-201ENST00000253452 NCOA2Q15596 1464 aa22.81■■□□□ 1.24
COX4I1-201ENST00000253452 CCDC141Q6ZP82 1450 aa22.81■■□□□ 1.24
COX4I1-201ENST00000253452 CEP170BQ9Y4F5 1589 aaPredicted RBP22.8■■□□□ 1.24
COX4I1-201ENST00000253452 ZNF335Q9H4Z2 1342 aaPredicted RBP22.8■■□□□ 1.24
COX4I1-201ENST00000253452 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
COX4I1-201ENST00000253452 MYO3AQ8NEV4 1616 aa22.79■■□□□ 1.24
COX4I1-201ENST00000253452 DISP3Q9P2K9 1392 aa22.79■■□□□ 1.24
COX4I1-201ENST00000253452 TSPY4P0CV99 314 aa22.79■■□□□ 1.24
COX4I1-201ENST00000253452 TSPY10P0CW01 314 aa22.79■■□□□ 1.24
COX4I1-201ENST00000253452 ZNF142P52746 1687 aaPredicted RBP22.78■■□□□ 1.24
COX4I1-201ENST00000253452 A2ML1A8K2U0 1454 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms