RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 NUP160Q12769 1436 aa27.78■■■□□ 2.04
CDC42EP1-201ENST00000249014 PRG4Q92954 1404 aaPredicted RBP27.77■■■□□ 2.04
CDC42EP1-201ENST00000249014 ROCK1Q13464 1354 aa27.76■■■□□ 2.03
CDC42EP1-201ENST00000249014 TROQ12816 1431 aaPredicted RBP27.76■■■□□ 2.03
CDC42EP1-201ENST00000249014 MPHOSPH9Q99550 1183 aa27.75■■■□□ 2.03
CDC42EP1-201ENST00000249014 JPH4Q96JJ6 628 aa27.72■■■□□ 2.03
CDC42EP1-201ENST00000249014 CARMIL2Q6F5E8 1435 aa27.71■■■□□ 2.03
CDC42EP1-201ENST00000249014 KIF14Q15058 1648 aa27.7■■■□□ 2.03
CDC42EP1-201ENST00000249014 ADCY10Q96PN6 1610 aa27.69■■■□□ 2.02
CDC42EP1-201ENST00000249014 ITSN2Q9NZM3 1697 aa27.69■■■□□ 2.02
CDC42EP1-201ENST00000249014 CAMSAP2Q08AD1 1489 aa27.67■■■□□ 2.02
CDC42EP1-201ENST00000249014 FOXD1Q16676 465 aa27.66■■■□□ 2.02
CDC42EP1-201ENST00000249014 GPATCH8Q9UKJ3 1502 aaKnown RBP27.66■■■□□ 2.02
CDC42EP1-201ENST00000249014 CFDP1Q9UEE9 299 aaPredicted RBP27.62■■■□□ 2.01
CDC42EP1-201ENST00000249014 ABCA8O94911 1581 aa27.6■■■□□ 2.01
CDC42EP1-201ENST00000249014 ANKRD30BQ9BXX2 1392 aa27.59■■■□□ 2.01
CDC42EP1-201ENST00000249014 ADGBQ8N7X0 1667 aa27.59■■■□□ 2.01
CDC42EP1-201ENST00000249014 ANP32CO43423 234 aa27.58■■■□□ 2
CDC42EP1-201ENST00000249014 CROCC2H7BZ55 1655 aa27.57■■■□□ 2
CDC42EP1-201ENST00000249014 L3MBTL2Q969R5 705 aa27.56■■■□□ 2
CDC42EP1-201ENST00000249014 CCER2I3L3R5 266 aa27.55■■■□□ 2
CDC42EP1-201ENST00000249014 RPRD2Q5VT52 1461 aaKnown RBP27.55■■■□□ 2
CDC42EP1-201ENST00000249014 NCOA1Q15788 1441 aa27.54■■■□□ 2
CDC42EP1-201ENST00000249014 ZNF777Q9ULD5 760 aaPredicted RBP27.53■■■□□ 2
CDC42EP1-201ENST00000249014 CDC42BPAQ5VT25 1732 aa27.53■■■□□ 2
CDC42EP1-201ENST00000249014 ATP10BO94823 1461 aa27.53■■■□□ 2
CDC42EP1-201ENST00000249014 HSPA5P11021 654 aaKnown RBP27.52■■■□□ 2
CDC42EP1-201ENST00000249014 SUPT16HQ9Y5B9 1047 aaKnown RBP27.52■■■□□ 2
CDC42EP1-201ENST00000249014 SLC4A1APQ9BWU0 796 aaKnown RBP27.52■■■□□ 2
CDC42EP1-201ENST00000249014 ADGRL2O95490 1459 aa27.51■■□□□ 1.99
CDC42EP1-201ENST00000249014 PZPP20742 1482 aa27.5■■□□□ 1.99
CDC42EP1-201ENST00000249014 TEX14Q8IWB6 1497 aa27.49■■□□□ 1.99
CDC42EP1-201ENST00000249014 ABCC10Q5T3U5 1492 aa27.48■■□□□ 1.99
CDC42EP1-201ENST00000249014 PLEKHD1A6NEE1 506 aa27.48■■□□□ 1.99
CDC42EP1-201ENST00000249014 WASHC2AQ641Q2 1341 aa27.47■■□□□ 1.99
CDC42EP1-201ENST00000249014 EIF4G2P78344 907 aaKnown RBP eCLIP27.45■■□□□ 1.98
CDC42EP1-201ENST00000249014 NBPF8Q3BBV2 869 aa27.42■■□□□ 1.98
CDC42EP1-201ENST00000249014 ANKRD30AQ9BXX3 1397 aa27.41■■□□□ 1.98
CDC42EP1-201ENST00000249014 CHD1O14646 1710 aa27.39■■□□□ 1.98
CDC42EP1-201ENST00000249014 PTPRGP23470 1445 aa27.37■■□□□ 1.97
CDC42EP1-201ENST00000249014 ANKRD50Q9ULJ7 1429 aa27.35■■□□□ 1.97
CDC42EP1-201ENST00000249014 SHANK2Q9UPX8 1470 aa27.35■■□□□ 1.97
CDC42EP1-201ENST00000249014 KIAA1107Q9UPP5 1409 aa27.34■■□□□ 1.97
CDC42EP1-201ENST00000249014 C9orf84Q5VXU9 1444 aa27.33■■□□□ 1.97
CDC42EP1-201ENST00000249014 C11orf95C9JLR9 678 aaPredicted RBP27.33■■□□□ 1.97
CDC42EP1-201ENST00000249014 PKD2Q13563 968 aa27.29■■□□□ 1.96
CDC42EP1-201ENST00000249014 SPATA31E1Q6ZUB1 1445 aa27.28■■□□□ 1.96
CDC42EP1-201ENST00000249014 CNTLNQ9NXG0 1405 aa27.28■■□□□ 1.96
CDC42EP1-201ENST00000249014 CCDC7Q96M83 1385 aa27.28■■□□□ 1.96
CDC42EP1-201ENST00000249014 MBD5Q9P267 1494 aa27.27■■□□□ 1.96
CDC42EP1-201ENST00000249014 CDC42BPBQ9Y5S2 1711 aa27.27■■□□□ 1.96
CDC42EP1-201ENST00000249014 SHROOM2Q13796 1616 aa27.26■■□□□ 1.95
CDC42EP1-201ENST00000249014 ARHGEF5Q12774 1597 aa27.26■■□□□ 1.95
CDC42EP1-201ENST00000249014 POLR1AO95602 1720 aaPredicted RBP27.25■■□□□ 1.95
CDC42EP1-201ENST00000249014 HNRNPMP52272 730 aaKnown RBP eCLIP27.25■■□□□ 1.95
CDC42EP1-201ENST00000249014 SAMD9LQ8IVG5 1584 aa27.24■■□□□ 1.95
CDC42EP1-201ENST00000249014 PREX2Q70Z35 1606 aa27.24■■□□□ 1.95
CDC42EP1-201ENST00000249014 TSPY4P0CV99 314 aa27.22■■□□□ 1.95
CDC42EP1-201ENST00000249014 TSPY10P0CW01 314 aa27.22■■□□□ 1.95
CDC42EP1-201ENST00000249014 NUP155O75694 1391 aa27.21■■□□□ 1.95
CDC42EP1-201ENST00000249014 KDM5DQ9BY66 1539 aa27.2■■□□□ 1.94
CDC42EP1-201ENST00000249014 KIF15Q9NS87 1388 aa27.19■■□□□ 1.94
CDC42EP1-201ENST00000249014 ERCC6L2Q5T890 1561 aa27.17■■□□□ 1.94
CDC42EP1-201ENST00000249014 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
CDC42EP1-201ENST00000249014 CCDC141Q6ZP82 1450 aa27.16■■□□□ 1.94
CDC42EP1-201ENST00000249014 TTC37Q6PGP7 1564 aa27.14■■□□□ 1.94
CDC42EP1-201ENST00000249014 FKBP8Q14318 412 aa27.14■■□□□ 1.94
CDC42EP1-201ENST00000249014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.11■■□□□ 1.934e-7■■■□□ 16
CDC42EP1-201ENST00000249014 CCDC184Q52MB2 194 aa27.1■■□□□ 1.93
CDC42EP1-201ENST00000249014 ZNF326Q5BKZ1 582 aaKnown RBP27.1■■□□□ 1.93
CDC42EP1-201ENST00000249014 PRKRIP1Q9H875 184 aaPredicted RBP27.1■■□□□ 1.93
CDC42EP1-201ENST00000249014 BCORL1Q5H9F3 1711 aa27.09■■□□□ 1.93
CDC42EP1-201ENST00000249014 ABCC2Q92887 1545 aa27.09■■□□□ 1.93
CDC42EP1-201ENST00000249014 SYCP2Q9BX26 1530 aa27.09■■□□□ 1.93
CDC42EP1-201ENST00000249014 HNRNPUQ00839 825 aaKnown RBP eCLIP27.08■■□□□ 1.93
CDC42EP1-201ENST00000249014 BCANQ96GW7 911 aa27.08■■□□□ 1.93
CDC42EP1-201ENST00000249014 KDM5CP41229 1560 aa27.07■■□□□ 1.92
CDC42EP1-201ENST00000249014 USP47Q96K76 1375 aa27.07■■□□□ 1.92
CDC42EP1-201ENST00000249014 UHRF1BP1Q6BDS2 1440 aa27.07■■□□□ 1.92
CDC42EP1-201ENST00000249014 ARHGAP5Q13017 1502 aa27.06■■□□□ 1.92
CDC42EP1-201ENST00000249014 RSPH4AQ5TD94 716 aa27.05■■□□□ 1.92
CDC42EP1-201ENST00000249014 ARHGEF12Q9NZN5 1544 aa27.04■■□□□ 1.92
CDC42EP1-201ENST00000249014 MYO5CQ9NQX4 1742 aa27.04■■□□□ 1.92
CDC42EP1-201ENST00000249014 FAM135AQ9P2D6 1515 aa27.03■■□□□ 1.92
CDC42EP1-201ENST00000249014 MAST1Q9Y2H9 1570 aa27.03■■□□□ 1.92
CDC42EP1-201ENST00000249014 RALGAPBQ86X10 1494 aa27.02■■□□□ 1.92
CDC42EP1-201ENST00000249014 NEFLP07196 543 aa26.99■■□□□ 1.91
CDC42EP1-201ENST00000249014 UNC13BO14795 1591 aa26.96■■□□□ 1.91
CDC42EP1-201ENST00000249014 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
CDC42EP1-201ENST00000249014 ZCCHC11Q5TAX3 1644 aaKnown RBP26.95■■□□□ 1.9
CDC42EP1-201ENST00000249014 MRS2Q9HD23 443 aa26.94■■□□□ 1.9
CDC42EP1-201ENST00000249014 DHX29Q7Z478 1369 aaKnown RBP26.94■■□□□ 1.9
CDC42EP1-201ENST00000249014 PLXNC1O60486 1568 aa26.94■■□□□ 1.9
CDC42EP1-201ENST00000249014 KDM2AQ9Y2K7 1162 aa26.93■■□□□ 1.9
CDC42EP1-201ENST00000249014 TSHZ2Q9NRE2 1034 aa26.92■■□□□ 1.9
CDC42EP1-201ENST00000249014 DCAF11Q8TEB1 546 aa26.91■■□□□ 1.9
CDC42EP1-201ENST00000249014 PLEKHH2Q8IVE3 1493 aa26.91■■□□□ 1.9
CDC42EP1-201ENST00000249014 CARD11Q9BXL7 1154 aa26.91■■□□□ 1.9
CDC42EP1-201ENST00000249014 FAM9BQ8IZU0 186 aa26.9■■□□□ 1.9
CDC42EP1-201ENST00000249014 ARID4BQ4LE39 1312 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms