RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ADGRL1O94910 1474 aa38.59■■■■□ 3.77
SDF2L1-201ENST00000248958 RICTORQ6R327 1708 aa38.58■■■■□ 3.77
SDF2L1-201ENST00000248958 FRMPD1Q5SYB0 1578 aa38.57■■■■□ 3.77
SDF2L1-201ENST00000248958 CDC42BPAQ5VT25 1732 aa38.56■■■■□ 3.76
SDF2L1-201ENST00000248958 TIAM1Q13009 1591 aa38.54■■■■□ 3.76
SDF2L1-201ENST00000248958 SCAPERQ9BY12 1400 aa38.52■■■■□ 3.76
SDF2L1-201ENST00000248958 MAP3K1Q13233 1512 aa38.49■■■■□ 3.75
SDF2L1-201ENST00000248958 ZMYM4Q5VZL5 1548 aa38.46■■■■□ 3.75
SDF2L1-201ENST00000248958 GPATCH8Q9UKJ3 1502 aaKnown RBP38.46■■■■□ 3.75
SDF2L1-201ENST00000248958 POGZQ7Z3K3 1410 aa38.45■■■■□ 3.75
SDF2L1-201ENST00000248958 CCNB3Q8WWL7 1395 aa38.44■■■■□ 3.74
SDF2L1-201ENST00000248958 SUPT6HQ7KZ85 1726 aaKnown RBP38.42■■■■□ 3.74
SDF2L1-201ENST00000248958 KDM4FA0A1W2PPD8 638 aa38.41■■■■□ 3.74
SDF2L1-201ENST00000248958 MAGI2Q86UL8 1455 aa38.41■■■■□ 3.74
SDF2L1-201ENST00000248958 ITSN2Q9NZM3 1697 aa38.38■■■■□ 3.73
SDF2L1-201ENST00000248958 ZNF518AQ6AHZ1 1483 aa38.37■■■■□ 3.73
SDF2L1-201ENST00000248958 LRRC9Q6ZRR7 1453 aa38.37■■■■□ 3.73
SDF2L1-201ENST00000248958 ABCC1P33527 1531 aa38.37■■■■□ 3.73
SDF2L1-201ENST00000248958 ARHGEF40Q8TER5 1519 aa38.35■■■■□ 3.73
SDF2L1-201ENST00000248958 APLP2Q06481 763 aa38.34■■■■□ 3.73
SDF2L1-201ENST00000248958 CFDP1Q9UEE9 299 aaPredicted RBP38.34■■■■□ 3.73
SDF2L1-201ENST00000248958 ZFYVE16Q7Z3T8 1539 aa38.32■■■■□ 3.72
SDF2L1-201ENST00000248958 NCOA2Q15596 1464 aa38.31■■■■□ 3.72
SDF2L1-201ENST00000248958 KDM5CP41229 1560 aa38.3■■■■□ 3.72
SDF2L1-201ENST00000248958 SAMD9LQ8IVG5 1584 aa38.3■■■■□ 3.72
SDF2L1-201ENST00000248958 PLEKHH2Q8IVE3 1493 aa38.28■■■■□ 3.72
SDF2L1-201ENST00000248958 ZNF777Q9ULD5 760 aaPredicted RBP38.28■■■■□ 3.72
SDF2L1-201ENST00000248958 ARHGEF12Q9NZN5 1544 aa38.26■■■■□ 3.72
SDF2L1-201ENST00000248958 KIAA1107Q9UPP5 1409 aa38.24■■■■□ 3.71
SDF2L1-201ENST00000248958 AFAP1Q8N556 730 aa38.24■■■■□ 3.71
SDF2L1-201ENST00000248958 YEATS2Q9ULM3 1422 aa38.21■■■■□ 3.71
SDF2L1-201ENST00000248958 HECW2Q9P2P5 1572 aa38.21■■■■□ 3.71
SDF2L1-201ENST00000248958 TRAPPC8Q9Y2L5 1435 aa38.21■■■■□ 3.71
SDF2L1-201ENST00000248958 KANK4Q5T7N3 995 aaPredicted RBP38.2■■■■□ 3.71
SDF2L1-201ENST00000248958 SYCP2Q9BX26 1530 aa38.19■■■■□ 3.7
SDF2L1-201ENST00000248958 MLH3Q9UHC1 1453 aa38.18■■■■□ 3.7
SDF2L1-201ENST00000248958 ATP10AO60312 1499 aa38.14■■■■□ 3.7
SDF2L1-201ENST00000248958 MYT1LQ9UL68 1186 aa38.13■■■■□ 3.69
SDF2L1-201ENST00000248958 ARID4BQ4LE39 1312 aaPredicted RBP38.12■■■■□ 3.69
SDF2L1-201ENST00000248958 HNRNPMP52272 730 aaKnown RBP eCLIP38.11■■■■□ 3.69
SDF2L1-201ENST00000248958 C9orf84Q5VXU9 1444 aa38.11■■■■□ 3.69
SDF2L1-201ENST00000248958 BCORL1Q5H9F3 1711 aa38.09■■■■□ 3.69
SDF2L1-201ENST00000248958 ADAMTSL3P82987 1691 aa38.05■■■■□ 3.68
SDF2L1-201ENST00000248958 KIDINS220Q9ULH0 1771 aa38.05■■■■□ 3.68
SDF2L1-201ENST00000248958 DIP2CQ9Y2E4 1556 aa38.05■■■■□ 3.68
SDF2L1-201ENST00000248958 ZNF644Q9H582 1327 aaPredicted RBP38.04■■■■□ 3.68
SDF2L1-201ENST00000248958 REREQ9P2R6 1566 aa38.03■■■■□ 3.68
SDF2L1-201ENST00000248958 CAMSAP2Q08AD1 1489 aa38.03■■■■□ 3.68
SDF2L1-201ENST00000248958 ABCA6Q8N139 1617 aa38.02■■■■□ 3.68
SDF2L1-201ENST00000248958 SPAG9O60271 1321 aaKnown RBP38.02■■■■□ 3.68
SDF2L1-201ENST00000248958 MBD5Q9P267 1494 aa38.02■■■■□ 3.68
SDF2L1-201ENST00000248958 MYOM3Q5VTT5 1437 aa38.01■■■■□ 3.68
SDF2L1-201ENST00000248958 MIA2Q96PC5 1412 aa38.01■■■■□ 3.68
SDF2L1-201ENST00000248958 RSPH4AQ5TD94 716 aa38■■■■□ 3.67
SDF2L1-201ENST00000248958 SIGLEC1Q9BZZ2 1709 aa38■■■■□ 3.67
SDF2L1-201ENST00000248958 INO80Q9ULG1 1556 aaPredicted RBP37.96■■■■□ 3.67
SDF2L1-201ENST00000248958 ATP7AQ04656 1500 aa37.96■■■■□ 3.67
SDF2L1-201ENST00000248958 CCDC141Q6ZP82 1450 aa37.92■■■■□ 3.66
SDF2L1-201ENST00000248958 ARHGEF5Q12774 1597 aa37.92■■■■□ 3.66
SDF2L1-201ENST00000248958 MADDQ8WXG6 1647 aa37.9■■■■□ 3.66
SDF2L1-201ENST00000248958 RTEL1-TNFRSF6BF6WH68 1400 aa37.89■■■■□ 3.66
SDF2L1-201ENST00000248958 AGLP35573 1532 aa37.88■■■■□ 3.65
SDF2L1-201ENST00000248958 ADGBQ8N7X0 1667 aa37.82■■■■□ 3.65
SDF2L1-201ENST00000248958 MLECQ14165 292 aa37.82■■■■□ 3.64
SDF2L1-201ENST00000248958 PTPRMP28827 1452 aa37.82■■■■□ 3.64
SDF2L1-201ENST00000248958 FER1L4A9Z1Z3 1794 aa37.8■■■■□ 3.64
SDF2L1-201ENST00000248958 RIMS1Q86UR5 1692 aaKnown RBP37.8■■■■□ 3.64
SDF2L1-201ENST00000248958 PTPN23Q9H3S7 1636 aa37.79■■■■□ 3.64
SDF2L1-201ENST00000248958 TSPY4P0CV99 314 aa37.79■■■■□ 3.64
SDF2L1-201ENST00000248958 TSPY10P0CW01 314 aa37.79■■■■□ 3.64
SDF2L1-201ENST00000248958 A2MP01023 1474 aa37.77■■■■□ 3.64
SDF2L1-201ENST00000248958 FGD6Q6ZV73 1430 aa37.77■■■■□ 3.64
SDF2L1-201ENST00000248958 PLXNC1O60486 1568 aa37.74■■■■□ 3.63
SDF2L1-201ENST00000248958 MAST1Q9Y2H9 1570 aa37.72■■■■□ 3.63
SDF2L1-201ENST00000248958 TCOF1Q13428 1488 aaKnown RBP37.72■■■■□ 3.63
SDF2L1-201ENST00000248958 DHX29Q7Z478 1369 aaKnown RBP37.65■■■■□ 3.62
SDF2L1-201ENST00000248958 CROCC2H7BZ55 1655 aa37.61■■■■□ 3.61
SDF2L1-201ENST00000248958 ESF1Q9H501 851 aaKnown RBP37.61■■■■□ 3.61
SDF2L1-201ENST00000248958 DNMT1P26358 1616 aaKnown RBP37.61■■■■□ 3.61
SDF2L1-201ENST00000248958 SHANK2Q9UPX8 1470 aa37.6■■■■□ 3.61
SDF2L1-201ENST00000248958 ABCC5O15440 1437 aa37.57■■■■□ 3.6
SDF2L1-201ENST00000248958 CNTLNQ9NXG0 1405 aa37.57■■■■□ 3.6
SDF2L1-201ENST00000248958 DAPK1P53355 1430 aa37.56■■■■□ 3.6
SDF2L1-201ENST00000248958 PPP6R1Q9UPN7 881 aa37.53■■■■□ 3.6
SDF2L1-201ENST00000248958 MROH2AA6NES4 1674 aa37.49■■■■□ 3.59
SDF2L1-201ENST00000248958 GGT6Q6P531 493 aa37.48■■■■□ 3.59
SDF2L1-201ENST00000248958 FAM50AQ14320 339 aaKnown RBP37.47■■■■□ 3.59
SDF2L1-201ENST00000248958 PLPPR3Q6T4P5 718 aa37.46■■■■□ 3.59
SDF2L1-201ENST00000248958 C3P01024 1663 aa37.45■■■■□ 3.59
SDF2L1-201ENST00000248958 KIF3BO15066 747 aa37.45■■■■□ 3.59
SDF2L1-201ENST00000248958 DUOX2Q9NRD8 1548 aa37.45■■■■□ 3.59
SDF2L1-201ENST00000248958 EIF2AK4Q9P2K8 1649 aaKnown RBP37.44■■■■□ 3.58
SDF2L1-201ENST00000248958 PPARGC1BQ86YN6 1023 aaKnown RBP37.44■■■■□ 3.58
SDF2L1-201ENST00000248958 FAM135AQ9P2D6 1515 aa37.41■■■■□ 3.58
SDF2L1-201ENST00000248958 CLTCQ00610 1675 aaKnown RBP37.41■■■■□ 3.58
SDF2L1-201ENST00000248958 CEBPAP49715 358 aaPredicted RBP37.4■■■■□ 3.58
SDF2L1-201ENST00000248958 ANKRD30AQ9BXX3 1397 aa37.39■■■■□ 3.58
SDF2L1-201ENST00000248958 SETD1BQ9UPS6 1966 aaKnown RBP37.38■■■■□ 3.57
SDF2L1-201ENST00000248958 KIF15Q9NS87 1388 aa37.38■■■■□ 3.57
SDF2L1-201ENST00000248958 ZMYM3Q14202 1370 aa37.35■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms