RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CFDP1Q9UEE9 299 aaPredicted RBP34.65■■■■□ 3.14
SYNGR3-201ENST00000248121 SETD5Q9C0A6 1442 aa34.62■■■■□ 3.13
SYNGR3-201ENST00000248121 DNMT1P26358 1616 aaKnown RBP34.61■■■■□ 3.13
SYNGR3-201ENST00000248121 WDR7Q9Y4E6 1490 aa34.6■■■■□ 3.13
SYNGR3-201ENST00000248121 ZNF777Q9ULD5 760 aaPredicted RBP34.59■■■■□ 3.13
SYNGR3-201ENST00000248121 MYO5CQ9NQX4 1742 aa34.59■■■■□ 3.13
SYNGR3-201ENST00000248121 CLSPNQ9HAW4 1339 aa34.58■■■■□ 3.13
SYNGR3-201ENST00000248121 ASXL2Q76L83 1435 aa34.56■■■■□ 3.12
SYNGR3-201ENST00000248121 DAPK1P53355 1430 aa34.55■■■■□ 3.12
SYNGR3-201ENST00000248121 SAMD9LQ8IVG5 1584 aa34.54■■■■□ 3.12
SYNGR3-201ENST00000248121 ABCC5O15440 1437 aa34.53■■■■□ 3.12
SYNGR3-201ENST00000248121 CHIC2Q9UKJ5 165 aa34.53■■■■□ 3.12
SYNGR3-201ENST00000248121 CYB5RLQ6IPT4 315 aa34.52■■■■□ 3.12
SYNGR3-201ENST00000248121 CROCC2H7BZ55 1655 aa34.5■■■■□ 3.11
SYNGR3-201ENST00000248121 ARHGAP5Q13017 1502 aa34.48■■■■□ 3.11
SYNGR3-201ENST00000248121 HFM1A2PYH4 1435 aa34.47■■■■□ 3.11
SYNGR3-201ENST00000248121 NAIPQ13075 1403 aa34.45■■■■□ 3.11
SYNGR3-201ENST00000248121 GCC2Q8IWJ2 1684 aa34.45■■■■□ 3.11
SYNGR3-201ENST00000248121 RRP7BPQ9NSQ0 103 aa34.42■■■■□ 3.1
SYNGR3-201ENST00000248121 ABCA9Q8IUA7 1624 aa34.42■■■■□ 3.1
SYNGR3-201ENST00000248121 NPM1P06748 294 aaKnown RBP eCLIP34.42■■■■□ 3.1
SYNGR3-201ENST00000248121 KDM6BO15054 1643 aa34.4■■■■□ 3.1
SYNGR3-201ENST00000248121 MAPKBP1O60336 1514 aa34.39■■■■□ 3.1
SYNGR3-201ENST00000248121 PLCH2O75038 1416 aa34.39■■■■□ 3.1
SYNGR3-201ENST00000248121 SYCP2Q9BX26 1530 aa34.37■■■■□ 3.09
SYNGR3-201ENST00000248121 MBD5Q9P267 1494 aa34.36■■■■□ 3.09
SYNGR3-201ENST00000248121 ADGBQ8N7X0 1667 aa34.36■■■■□ 3.09
SYNGR3-201ENST00000248121 AKNAQ7Z591 1439 aa34.36■■■■□ 3.09
SYNGR3-201ENST00000248121 HNRNPMP52272 730 aaKnown RBP eCLIP34.35■■■■□ 3.09
SYNGR3-201ENST00000248121 ARHGEF5Q12774 1597 aa34.33■■■■□ 3.09
SYNGR3-201ENST00000248121 ARHGEF12Q9NZN5 1544 aa34.3■■■■□ 3.08
SYNGR3-201ENST00000248121 ROCK1Q13464 1354 aa34.28■■■■□ 3.08
SYNGR3-201ENST00000248121 ABCC1P33527 1531 aa34.26■■■■□ 3.07
SYNGR3-201ENST00000248121 ARAP3Q8WWN8 1544 aa34.26■■■■□ 3.07
SYNGR3-201ENST00000248121 ADGRL2O95490 1459 aa34.24■■■■□ 3.07
SYNGR3-201ENST00000248121 CCDC141Q6ZP82 1450 aa34.24■■■■□ 3.07
SYNGR3-201ENST00000248121 SHANK2Q9UPX8 1470 aa34.24■■■■□ 3.07
SYNGR3-201ENST00000248121 C9orf84Q5VXU9 1444 aa34.23■■■■□ 3.07
SYNGR3-201ENST00000248121 NCOA1Q15788 1441 aa34.22■■■■□ 3.07
SYNGR3-201ENST00000248121 EFCAB2Q5VUJ9 269 aa34.19■■■■□ 3.06
SYNGR3-201ENST00000248121 FANCAO15360 1455 aa34.18■■■■□ 3.06
SYNGR3-201ENST00000248121 KIAA1107Q9UPP5 1409 aa34.18■■■■□ 3.06
SYNGR3-201ENST00000248121 PLEKHH2Q8IVE3 1493 aa34.17■■■■□ 3.06
SYNGR3-201ENST00000248121 ZNF316A6NFI3 1004 aaPredicted RBP34.13■■■■□ 3.05
SYNGR3-201ENST00000248121 TRAPPC8Q9Y2L5 1435 aa34.12■■■■□ 3.05
SYNGR3-201ENST00000248121 ANKRD30AQ9BXX3 1397 aa34.11■■■■□ 3.05
SYNGR3-201ENST00000248121 MAST1Q9Y2H9 1570 aa34.1■■■■□ 3.05
SYNGR3-201ENST00000248121 CD109Q6YHK3 1445 aa34.1■■■■□ 3.05
SYNGR3-201ENST00000248121 TSPY4P0CV99 314 aa34.1■■■■□ 3.05
SYNGR3-201ENST00000248121 TSPY10P0CW01 314 aa34.1■■■■□ 3.05
SYNGR3-201ENST00000248121 MAP3K4Q9Y6R4 1608 aa34.06■■■■□ 3.04
SYNGR3-201ENST00000248121 DIP2BQ9P265 1576 aa34.04■■■■□ 3.04
SYNGR3-201ENST00000248121 ADGRL1O94910 1474 aa34.04■■■■□ 3.04
SYNGR3-201ENST00000248121 RSPH4AQ5TD94 716 aa34.03■■■■□ 3.04
SYNGR3-201ENST00000248121 KIF15Q9NS87 1388 aa34.03■■■■□ 3.04
SYNGR3-201ENST00000248121 DENND4BO75064 1496 aaPredicted RBP34.02■■■■□ 3.04
SYNGR3-201ENST00000248121 SIN3AQ96ST3 1273 aa34.02■■■■□ 3.04
SYNGR3-201ENST00000248121 ANKRD50Q9ULJ7 1429 aa34■■■■□ 3.03
SYNGR3-201ENST00000248121 PLXNC1O60486 1568 aa33.99■■■■□ 3.03
SYNGR3-201ENST00000248121 GLI2P10070 1586 aa33.99■■■■□ 3.03
SYNGR3-201ENST00000248121 AFAP1Q8N556 730 aa33.99■■■■□ 3.03
SYNGR3-201ENST00000248121 TRIM52Q96A61 297 aa33.99■■■■□ 3.03
SYNGR3-201ENST00000248121 SCAPERQ9BY12 1400 aa33.98■■■■□ 3.03
SYNGR3-201ENST00000248121 CFAP74Q9C0B2 1584 aa33.96■■■■□ 3.03
SYNGR3-201ENST00000248121 DIEXFQ68CQ4 756 aaKnown RBP33.96■■■■□ 3.03
SYNGR3-201ENST00000248121 ZFYVE16Q7Z3T8 1539 aa33.95■■■■□ 3.02
SYNGR3-201ENST00000248121 TSPOAP1O95153 1857 aa33.91■■■■□ 3.02
SYNGR3-201ENST00000248121 NEUROD1Q13562 356 aa33.91■■■■□ 3.02
SYNGR3-201ENST00000248121 INO80Q9ULG1 1556 aaPredicted RBP33.9■■■■□ 3.02
SYNGR3-201ENST00000248121 KIF13AQ9H1H9 1805 aa33.89■■■■□ 3.02
SYNGR3-201ENST00000248121 FAM69CQ0P6D2 419 aa33.89■■■■□ 3.02
SYNGR3-201ENST00000248121 PPRC1Q5VV67 1664 aaKnown RBP33.87■■■■□ 3.01
SYNGR3-201ENST00000248121 PZPP20742 1482 aa33.87■■■■□ 3.01
SYNGR3-201ENST00000248121 SPAG9O60271 1321 aaKnown RBP33.85■■■■□ 3.01
SYNGR3-201ENST00000248121 ATP7AQ04656 1500 aa33.85■■■■□ 3.01
SYNGR3-201ENST00000248121 MPHOSPH9Q99550 1183 aa33.84■■■■□ 3.01
SYNGR3-201ENST00000248121 NEO1Q92859 1461 aa33.82■■■■□ 3.01
SYNGR3-201ENST00000248121 TIMELESSQ9UNS1 1208 aa33.81■■■■□ 3
SYNGR3-201ENST00000248121 DUOX2Q9NRD8 1548 aa33.81■■■■□ 3
SYNGR3-201ENST00000248121 KIDINS220Q9ULH0 1771 aa33.81■■■■□ 3
SYNGR3-201ENST00000248121 FOXD1Q16676 465 aa33.81■■■■□ 3
SYNGR3-201ENST00000248121 RTEL1-TNFRSF6BF6WH68 1400 aa33.81■■■■□ 3
SYNGR3-201ENST00000248121 POGZQ7Z3K3 1410 aa33.81■■■■□ 3
SYNGR3-201ENST00000248121 ZNF518AQ6AHZ1 1483 aa33.79■■■■□ 3
SYNGR3-201ENST00000248121 KDM5CP41229 1560 aa33.78■■■■□ 3
SYNGR3-201ENST00000248121 UNC13BO14795 1591 aa33.74■■■□□ 2.99
SYNGR3-201ENST00000248121 KDM5DQ9BY66 1539 aa33.74■■■□□ 2.99
SYNGR3-201ENST00000248121 RICTORQ6R327 1708 aa33.74■■■□□ 2.99
SYNGR3-201ENST00000248121 SLC4A1APQ9BWU0 796 aaKnown RBP33.73■■■□□ 2.99
SYNGR3-201ENST00000248121 NUP155O75694 1391 aa33.72■■■□□ 2.99
SYNGR3-201ENST00000248121 ERBINQ96RT1 1412 aa33.72■■■□□ 2.99
SYNGR3-201ENST00000248121 RAPGEF3O95398 923 aa33.7■■■□□ 2.98
SYNGR3-201ENST00000248121 HECW2Q9P2P5 1572 aa33.69■■■□□ 2.98
SYNGR3-201ENST00000248121 ACIN1Q9UKV3 1341 aaKnown RBP33.68■■■□□ 2.98
SYNGR3-201ENST00000248121 FRMPD1Q5SYB0 1578 aa33.68■■■□□ 2.98
SYNGR3-201ENST00000248121 MYT1LQ9UL68 1186 aa33.67■■■□□ 2.98
SYNGR3-201ENST00000248121 PPP1R15AO75807 674 aaPredicted RBP33.67■■■□□ 2.98
SYNGR3-201ENST00000248121 FAM135AQ9P2D6 1515 aa33.65■■■□□ 2.98
SYNGR3-201ENST00000248121 ABCA6Q8N139 1617 aa33.64■■■□□ 2.98
SYNGR3-201ENST00000248121 TONSLQ96HA7 1378 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms